mRNA_P-canaliculata_contig102619.405.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig102619.405.1
Unique NamemRNA_P-canaliculata_contig102619.405.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: A0A1X6ZUU6_9RHOB (N-ethylmaleimide reductase n=1 Tax=Roseovarius albus TaxID=1247867 RepID=A0A1X6ZUU6_9RHOB)

HSP 1 Score: 284 bits (727), Expect = 2.040e-92
Identity = 139/231 (60.17%), Postives = 177/231 (76.62%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDGAFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            IQA A TFT +G  N S PR L    I+ +V +Y  AA+ +++AGFDGVEVH ANGYLLNQFIS++TN R D YGGS ENR++LLL+VVDAV+  +G GRVGVRLSPTGTFNDI D +A+  Y+++++E+ KR L++LHVVE FPG+  S  +K+L+ NLR  + GNYIANG Y+K SAAE ++ GA AVSFGR +ISNPDL +R    A+L  VD++TLYGGDEKGY DY
Sbjct:  123 IQAEAPTFTEDGPANVSAPRELSAAEIETIVTEYTDAAQASIDAGFDGVEVHGANGYLLNQFISTNTNDRTDAYGGSPENRAKLLLDVVDAVSERIGRGRVGVRLSPTGTFNDIHDGEASATYSFLFAEIDKRELAFLHVVEAFPGFEPSGPDKDLIQNLRTAYSGNYIANGGYDKDSAAEAVEKGAAAVSFGRMFISNPDLPERLRLGAELNSVDDETLYGGDEKGYIDY 353          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: A0A1Y6CP27_9PROT (N-ethylmaleimide reductase n=1 Tax=Pseudobacteriovorax antillogorgiicola TaxID=1513793 RepID=A0A1Y6CP27_9PROT)

HSP 1 Score: 257 bits (657), Expect = 8.090e-82
Identity = 127/232 (54.74%), Postives = 165/232 (71.12%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDG-AFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            I+A A TF   G  + S PR +  D I  +V  Y  AA     AGFDGVEVH ANGYL+NQF++S++N R D+YGGS EN+SR L+EV+DAV    G  RVG+RLSPTG FN I D++A E YTY+Y  L K++L+YLHVVE+FPG+P  ++ +E++ NL++ + G YIANG Y   S  E LK G A A+++GRP+ISNPDL +RF  D  LAE D++T YGGDEKGY+DY
Sbjct:  126 IRAEAQTFAKEGFVDVSEPREIRNDEIATIVEQYKHAAELCKAAGFDGVEVHGANGYLINQFLASNSNQRQDEYGGSAENKSRFLIEVLDAVIGVYGASRVGLRLSPTGKFNGINDEKAEETYTYLYKALNKKDLAYLHVVEQFPGFPEDKTAQEMVKNLKQLYTGTYIANGGYTAESGEERLKLGLADAIAYGRPFISNPDLPERFANDIALAEPDQNTFYGGDEKGYTDY 357          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: A0A4R0PKA3_9HYPH (Alkene reductase n=1 Tax=Oricola cellulosilytica TaxID=1429082 RepID=A0A4R0PKA3_9HYPH)

HSP 1 Score: 257 bits (656), Expect = 1.290e-81
Identity = 130/230 (56.52%), Postives = 162/230 (70.43%), Query Frame = 1
Query:    7 AIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDG-AFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            A A TFT  G E  S PR L +  I+ +VADY +AAR AMEAGFDGVEVH ANGYLLNQF+ S +N RDD+YGGS+ENR R  LE VDAV  E+G GRVGVR SP G  ND+ +D     YTY + EL KR L+YLHV+E FPG   SE ++ ++ ++R+ ++G YI NG Y+   AAE L+ G A AV+FGRPYISNPDL  R   + + AE +++T YGG EKGY+DY
Sbjct:  128 AEAQTFTKKGFEPTSKPRELTVGEIEALVADYAKAARNAMEAGFDGVEVHCANGYLLNQFLHSGSNKRDDEYGGSIENRCRFPLEAVDAVIAEIGAGRVGVRTSPLGEANDVPEDDPRALYTYFHGELAKRGLAYLHVMESFPGSDRSEEKRAVIEDVRKAWNGFYITNGGYDAERAAEALETGHADAVAFGRPYISNPDLAVRIAMNVEWAEPNQETFYGGGEKGYTDY 357          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: A0A2D9XP37_9PROT (Alkene reductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D9XP37_9PROT)

HSP 1 Score: 249 bits (637), Expect = 1.010e-78
Identity = 119/232 (51.29%), Postives = 160/232 (68.97%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDG-AFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            IQA   TFT  G +  S+P +L +DGIK  +AD+ + A  A +AGFDGVE+H ANGYL++QF+   TN R+DQYGGS+ENR+R +LE+ DAV       R+GVRLSPTG+FND+ D    E ++Y+  EL KR+L Y+H+VERFPG  +   +  ++  L + +DG YIANG+Y+   A + +K G A AV+FGRP+ISNPDL +R  K A+  E DEDT YGG  +GY DY
Sbjct:  124 IQADTKTFTQEGYQQVSMPEALSVDGIKQTIADFKKGAELAKKAGFDGVEIHGANGYLIDQFLRDGTNKREDQYGGSIENRARFILEIADAVKEIWPANRIGVRLSPTGSFNDMSDSNPLEIFSYVVEELNKRSLGYMHIVERFPGMDVGNDDLNIINALIKKWDGFYIANGDYDVMKAKDAIKSGHADAVAFGRPFISNPDLPERLEKGAEFNEPDEDTFYGGGAEGYIDY 355          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: A0A6I4T4D2_9SPHN (Alkene reductase n=1 Tax=Altericroceibacterium endophyticum TaxID=1808508 RepID=A0A6I4T4D2_9SPHN)

HSP 1 Score: 243 bits (619), Expect = 4.530e-76
Identity = 119/231 (51.52%), Postives = 154/231 (66.67%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDGAFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            I A   TFT NG E  S P +LD DGI+  +AD+  AA+  + AGFDG+EVH+ANGYLL+QF+    N R+D+YGG+LENR RLL EV+D V   V  GRVGVRLSP G  NDI D      +  +Y  L +RNL+YLHVVE FPG       + L+  LR  + G YI NG Y+  SAA+ ++ G  AV+FGRP+I+NPDL +R+ ++ +L E  +DT YGGDE GY+DY
Sbjct:  126 IAADTQTFTENGFEQVSDPVALDADGIRATIADFKHAAQMTLNAGFDGIEVHAANGYLLDQFLQDGVNHREDEYGGALENRMRLLSEVLDEVTQVVPAGRVGVRLSPLGQANDISDSDPKATFGKVYEMLSQRNLAYLHVVESFPGAEGDAESRALIKQLRGKYTGVYIGNGGYDAKSAADAIRGGVDAVAFGRPFIANPDLPERYRRNLELNEPHQDTFYGGDETGYTDY 356          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: UPI0016729FCB (alkene reductase n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI0016729FCB)

HSP 1 Score: 243 bits (619), Expect = 5.090e-76
Identity = 120/232 (51.72%), Postives = 160/232 (68.97%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDG-AFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            IQA A TFT +G ++ S P +L  DGIK  +AD+V AAR A EAGFDG+EVHSANGYLL+QF+   TN RDD+YGGSLENR+RLL E+++AV+      R+GVRLSP G   DI D      ++Y+Y  L K+ L+YLHVVE FPG      E+ L+  LR+ + G YI NG Y+   AA+ +  G A A++FGRP+I+NPDL +R+  +A+L E +++T YGG  +GY DY
Sbjct:  125 IQADAQTFTADGFQDCSEPVALTKDGIKDTIADFVTAARCAKEAGFDGIEVHSANGYLLDQFLQDGTNKRDDEYGGSLENRTRLLAEILEAVSEIWPRNRIGVRLSPLGHAGDISDSDPEATFSYVYKMLDKKKLAYLHVVEEFPGNDAGSDEEALIKKLRKLYSGFYIGNGGYDADRAAKAIGSGYAHAITFGRPFIANPDLPERYRTEAELNEPNDETFYGGGAEGYIDY 356          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: A0A845AAL9_9SPHN (N-ethylmaleimide reductase n=1 Tax=Altericroceibacterium indicum TaxID=374177 RepID=A0A845AAL9_9SPHN)

HSP 1 Score: 242 bits (618), Expect = 6.400e-76
Identity = 123/232 (53.02%), Postives = 156/232 (67.24%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDGAF-AVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            ++A   TFT NG E+ S P +LD DGI   + DY RAA FA +AGFDG+EVHSANGYLL+QF+    N R D+YGGS+ENR RLL +V+D V  E    RVG+RLSP G  NDI D      +  +Y  L  R L+YLHVVE+F G    E++K+LL  LR+ +DG YI NG Y+   AA+ +  GA  A++FGRP+I+NPDL +RF   A L E + DT YGGDEKGY+DY
Sbjct:  126 VKANTQTFTANGFEDCSDPVALDKDGIAQTIEDYGRAAAFARQAGFDGIEVHSANGYLLDQFLQDGVNQRTDEYGGSVENRMRLLNQVLDRVLQEFPANRVGIRLSPLGQANDITDSDPEALFGPVYDMLSTRKLAYLHVVEQFFGQDTEEADKQLLMRLRKRYDGVYIGNGGYDAEKAAKAISSGAADAITFGRPFIANPDLPERFRTGAALNEPNSDTFYGGDEKGYTDY 357          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: A0A2R8BPZ1_9RHOB (N-ethylmaleimide reductase n=1 Tax=Ascidiaceihabitans donghaensis TaxID=1510460 RepID=A0A2R8BPZ1_9RHOB)

HSP 1 Score: 239 bits (611), Expect = 7.280e-75
Identity = 123/232 (53.02%), Postives = 153/232 (65.95%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDG-AFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            +QA A TFT NG E  S P +L IDGI+  VADYV AA+ A  AGFDG+EVH+ANGYLL+QF+    N R D YGGSLENR RLL +++DAV      GR+GVRLSP G   DI D      +T +Y  L  R L+YLHVVE FPG   +   KELL  LR  + G +I NG Y+   A + + D  A A+SFGRP+I+NPDL +R   +A++ + D DT YGGDEKGY+DY
Sbjct:  126 LQADAQTFTANGFEPCSKPEALTIDGIQKTVADYVHAAQCAKNAGFDGIEVHAANGYLLDQFLQDGVNTRSDTYGGSLENRMRLLEDILDAVKDIWPAGRIGVRLSPLGQAGDISDSDPEALFTAVYKMLDARKLAYLHVVEAFPGGEDNSDGKELLARLRSHYSGFFIGNGGYDAERATQAIADTTAHAISFGRPFIANPDLPNRMRLNAEMTKPDGDTFYGGDEKGYTDY 357          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: A0A420DU06_9RHOB (N-ethylmaleimide reductase n=1 Tax=Sulfitobacter guttiformis TaxID=74349 RepID=A0A420DU06_9RHOB)

HSP 1 Score: 239 bits (609), Expect = 1.460e-74
Identity = 119/232 (51.29%), Postives = 157/232 (67.67%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAE-VLKDGAFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            +QA A TFT NG E  S P +L  +GI  ++ DY  AA+ A EAGFDG+E+H+ANGYLL+QF+    N R D YGGS+ NR RLL E++DAV      GR+GVRLSP G   DI D  +   +T +Y  L  R L+YLHVVE FPG    +  +ELL  L++ + G +IANG Y+ +SA+E +L++ A AV+FGRP+I+NPDL DR    A + + D+DT YGGDEKGY+DY
Sbjct:  126 LQADAQTFTENGFEQCSKPEALTSEGIAQIIKDYAHAAKCAKEAGFDGIELHAANGYLLDQFLQDGVNTRTDSYGGSIGNRMRLLEEILDAVEAVWPKGRIGVRLSPLGQAGDISDSNSEALFTEVYKMLDARALAYLHVVEAFPGSEGEDEGRELLARLKQHYTGFFIANGGYDASSASEAILEERAHAVTFGRPFIANPDLPDRMRTGADMNKQDQDTFYGGDEKGYTDY 357          
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Match: UPI0003B3E89D (alkene reductase n=1 Tax=Novosphingopyxis baekryungensis TaxID=279369 RepID=UPI0003B3E89D)

HSP 1 Score: 237 bits (605), Expect = 6.190e-74
Identity = 122/233 (52.36%), Postives = 156/233 (66.95%), Query Frame = 1
Query:    1 IQAIADTFTVNGVENASVPRSLDIDGIKGVVADYVRAARFAMEAGFDGVEVHSANGYLLNQFISSHTNIRDDQYGGSLENRSRLLLEVVDAVATEVGNGRVGVRLSPTGTFNDIKDDQAAENYTYIYSELGKRNLSYLHVVERFPGYPISESEKELLGNLRRGFDGNYIANGNYEKTSAAEVLKDG--AFAVSFGRPYISNPDLVDRFMKDAKLAEVDEDTLYGGDEKGYSDY 693
            IQA A T+T NG E  S P +LD DGI   +AD+  AA  A  AGFDG+EVH+ANGYLL+QF+    N RDD YGGS+ENR RLL EV+D V+      R+GVRLSP G   DI D    + ++ +Y +L +R+L+YLHVVE FPG       + L+  LR  +DG YIANG Y+  SA   + DG    AV+FGR +I+NPDL +R+ +DAKL + D+DT YGGDEKGY+DY
Sbjct:  126 IQADAQTYTANGFEQVSEPVALDADGIAKTIADFHTAAECAKRAGFDGIEVHAANGYLLDQFLQDGVNKRDDNYGGSIENRMRLLSEVLDTVSQVYPEERIGVRLSPLGQAGDISDSNPEKLFSAVYQKLSERDLAYLHVVEAFPGSDGDSEAQALIRRLREQYDGFYIANGGYDAESAVSEI-DGWNIDAVTFGRSFIANPDLPERYRRDAKLNKPDQDTFYGGDEKGYTDY 357          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102619.405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X6ZUU6_9RHOB2.040e-9260.17N-ethylmaleimide reductase n=1 Tax=Roseovarius alb... [more]
A0A1Y6CP27_9PROT8.090e-8254.74N-ethylmaleimide reductase n=1 Tax=Pseudobacteriov... [more]
A0A4R0PKA3_9HYPH1.290e-8156.52Alkene reductase n=1 Tax=Oricola cellulosilytica T... [more]
A0A2D9XP37_9PROT1.010e-7851.29Alkene reductase n=1 Tax=Alphaproteobacteria bacte... [more]
A0A6I4T4D2_9SPHN4.530e-7651.52Alkene reductase n=1 Tax=Altericroceibacterium end... [more]
UPI0016729FCB5.090e-7651.72alkene reductase n=1 Tax=Litorimonas cladophorae T... [more]
A0A845AAL9_9SPHN6.400e-7653.02N-ethylmaleimide reductase n=1 Tax=Altericroceibac... [more]
A0A2R8BPZ1_9RHOB7.280e-7553.02N-ethylmaleimide reductase n=1 Tax=Ascidiaceihabit... [more]
A0A420DU06_9RHOB1.460e-7451.29N-ethylmaleimide reductase n=1 Tax=Sulfitobacter g... [more]
UPI0003B3E89D6.190e-7452.36alkene reductase n=1 Tax=Novosphingopyxis baekryun... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102619contigP-canaliculata_contig102619:3..695 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size693
Cds size354
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102619.405.1prot_P-canaliculata_contig102619.405.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig102619 271..624 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815599.7844787-UTR-P-canaliculata_contig102619:2..2701622815599.7844787-UTR-P-canaliculata_contig102619:2..270Pelvetia canaliculata dioeciousUTRP-canaliculata_contig102619 3..270 +
1693494159.011708-UTR-P-canaliculata_contig102619:2..2701693494159.011708-UTR-P-canaliculata_contig102619:2..270Pelvetia canaliculata dioeciousUTRP-canaliculata_contig102619 3..270 +
1622815599.8089209-UTR-P-canaliculata_contig102619:624..6951622815599.8089209-UTR-P-canaliculata_contig102619:624..695Pelvetia canaliculata dioeciousUTRP-canaliculata_contig102619 625..695 +
1693494159.027474-UTR-P-canaliculata_contig102619:624..6951693494159.027474-UTR-P-canaliculata_contig102619:624..695Pelvetia canaliculata dioeciousUTRP-canaliculata_contig102619 625..695 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815599.7965438-CDS-P-canaliculata_contig102619:270..6241622815599.7965438-CDS-P-canaliculata_contig102619:270..624Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102619 271..624 +
1693494159.01962-CDS-P-canaliculata_contig102619:270..6241693494159.01962-CDS-P-canaliculata_contig102619:270..624Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102619 271..624 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig102619.405.1

>prot_P-canaliculata_contig102619.405.1 ID=prot_P-canaliculata_contig102619.405.1|Name=mRNA_P-canaliculata_contig102619.405.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=118bp
MPLQPKSGMAVSAFVCPQPEPLMISKMIRQQRITPISIRSLASAICPICM
WLSVFLAIRYPKVKKNCSVICAAGLMATILPTATTKKPQLQKCSKMELSL
SLLADLIFPIPIWWIDL*
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mRNA from alignment at P-canaliculata_contig102619:3..695+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig102619.405.1 ID=mRNA_P-canaliculata_contig102619.405.1|Name=mRNA_P-canaliculata_contig102619.405.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=693bp|location=Sequence derived from alignment at P-canaliculata_contig102619:3..695+ (Pelvetia canaliculata dioecious)
ATCCAAGCTATTGCTGATACCTTCACTGTCAATGGCGTCGAAAATGCTTC TGTTCCCCGCTCGCTCGATATAGATGGTATTAAAGGCGTTGTTGCAGATT ATGTTCGCGCTGCACGTTTTGCGATGGAAGCAGGTTTTGATGGCGTGGAA GTACACAGCGCCAACGGATATTTGCTGAACCAATTTATATCATCCCATAC TAATATACGAGACGATCAATATGGCGGCAGCCTAGAAAATAGATCGCGCC TCCTTCTCGAGGTCGTTGATGCCGTTGCAACCGAAGTCGGGAATGGCCGT GTCGGCGTTCGTTTGTCCCCAACCGGAACCTTTAATGATATCAAAGATGA TCAGGCAGCAGAGAATTACACCTATATCTATTCGGAGCTTGGCAAGCGCA ATCTGTCCTATTTGCATGTGGTTGAGCGTTTTCCTGGCTATCCGATATCC GAAAGTGAAAAAGAACTGCTCGGTAATTTGCGCCGCGGGTTTGATGGCAA CTATATTGCCAACGGCAACTACGAAAAAACCTCAGCTGCAGAAGTGCTCA AAGATGGAGCTTTCGCTGTCTCTTTTGGCAGACCTTATATTTCCAATCCC GATCTGGTGGATAGATTTATGAAGGATGCCAAACTTGCGGAAGTTGACGA AGATACTCTGTACGGTGGTGATGAGAAGGGGTATTCCGATTAC
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Coding sequence (CDS) from alignment at P-canaliculata_contig102619:3..695+

>mRNA_P-canaliculata_contig102619.405.1 ID=mRNA_P-canaliculata_contig102619.405.1|Name=mRNA_P-canaliculata_contig102619.405.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=708bp|location=Sequence derived from alignment at P-canaliculata_contig102619:3..695+ (Pelvetia canaliculata dioecious)
ATGCCGTTGCAACCGAAGTCGGGAATGGCCGTGTCGGCGTTCGTTTGTCC
CCAACCGGAACCTTTAATGATATCAAAGATGATCAGGCAGCAGAGAATTA
CACCTATATCTATTCGGAGCTTGGCAAGCGCAATCTGTCCTATTTGCATG
TGGTTGAGCGTTTTCCTGGCTATCCGATATCCGAAAGTGAAAAAGAACTG
CTCGGTAATTTGCGCCGCGGGTTTGATGGCAACTATATTGCCAACGGCAA
CTACGAAAAAACCTCAGCTGCAGAAGTGCTCAAAGATGGAGCTTTCGCTG
TCTCTTTTGGCAGACCTTATATTTCCAATCCCGATCTGGTGGATAGATTT
ATGAATGCCGTTGCAACCGAAGTCGGGAATGGCCGTGTCGGCGTTCGTTT
GTCCCCAACCGGAACCTTTAATGATATCAAAGATGATCAGGCAGCAGAGA
ATTACACCTATATCTATTCGGAGCTTGGCAAGCGCAATCTGTCCTATTTG
CATGTGGTTGAGCGTTTTCCTGGCTATCCGATATCCGAAAGTGAAAAAGA
ACTGCTCGGTAATTTGCGCCGCGGGTTTGATGGCAACTATATTGCCAACG
GCAACTACGAAAAAACCTCAGCTGCAGAAGTGCTCAAAGATGGAGCTTTC
GCTGTCTCTTTTGGCAGACCTTATATTTCCAATCCCGATCTGGTGGATAG
ATTTATGA
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