mRNA_P-canaliculata_contig1024.381.1 (mRNA) Pelvetia canaliculata dioecious
|
Overview
Homology
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: D8LSZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ3_ECTSI) HSP 1 Score: 476 bits (1224), Expect = 6.920e-163 Identity = 275/484 (56.82%), Postives = 311/484 (64.26%), Query Frame = 1
Query: 58 MIVQDYIATHFRDEKPIAQRYKPKGMDSCFGNFPREYKRPDPWDGNSTQRRRLRNSYGSRNESPAKSRLNDASKGISQVIRSGGASRPVSASYCRRSSRLHNIGLALPTEVQAAKATANLRAGIRPKSGPAMRRRPGSHLLTSTVGNTFIEIPPSRTKFLLQINRLTGFRGQREEERVGSWPKECTLSMAEACEETESRPKSAGGATSLLRERDRAKREQAGNDLPDPEELEATRSYLLKKGKFLVTPAKLMASLEVARATNTRPLSAPAFTRRRRLPAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREA-NPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESCGP 1506
MIVQDYI+ FR EKPI++R+ PKG+DSCFGNFP +YK D WDGN T RR R SY S SP K+R RP G R R PG T+ ER G S + + T RPK+AG + R R DLPD +ELEATR+YLL +GKF +TP+KLMASLE ARATN+RPLSAPA RRRR PAPPKAGAWRRR IAATLFRKYYVRGDLPI VDH + NAIRWKI PA LDFHVYLPIFFDG+RE +P+RFLAVQGT+DM+EGAP+KVLPVIPQLILP+ TALNTREPRIICP LK+LQQMILLSPM+G+ALVPYYRQ+LP+ NLFRG NSNMGDAIDYNQRSR+++G L++ETLE VMEQFGGPDAFINIKYMIPTYESCGP
Sbjct: 1 MIVQDYISKRFRGEKPISRRHMPKGVDSCFGNFPMQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTR------------------RP---------------------------------KGSRQXXXXXXXRDPGGETRTA--------------------------------ERRGEGGVPSLASTEKGRKATRVRPKTAGARPTS---RGRKGGGVVLEDLPDRQELEATRTYLLTQGKFRITPSKLMASLEAARATNSRPLSAPASVRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGKLIMETLE----VMEQFGGPDAFINIKYMIPTYESCGP 394
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: A0A836C8N9_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N9_9STRA) HSP 1 Score: 377 bits (967), Expect = 9.840e-125 Identity = 191/258 (74.03%), Postives = 219/258 (84.88%), Query Frame = 1
Query: 736 DPEELEATRSYLLKKGKFLVTPAKLMASLEVARATNTRPLSAPAFTRRRRLP--APPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREA-NPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
D EL+ATR YL+ GKF +PAKLMA+LEVARAT+TRPL+AP + RRR PKAGAWRRR IA TLFR+YY RGDLPICVDHR+NGNAIRWK+ A LDFHVYLPIFFDG+RE +PFRFLAVQGTLDM+E AP+KVLPVIPQLILP+ +ALNTR P IICPVLK+LQQMILL+ VG+ALVPYYRQILP+ NLF+ KN+N+GD IDY QRSRV++G L+LETLE +MEQFGGPDAFINIKY+IPTYESC
Sbjct: 90 DLAELQATRQYLMTSGKFKTSPAKLMAALEVARATHTRPLTAPGYVLRRRQADVTAPKAGAWRRRAIAPTLFRRYYERGDLPICVDHRSNGNAIRWKMRAAELDFHVYLPIFFDGLREVEDPFRFLAVQGTLDMVEAAPDKVLPVIPQLILPLKSALNTRAPTIICPVLKILQQMILLNAAVGQALVPYYRQILPIFNLFKAKNANLGDGIDYGQRSRVNVGELILETLE----LMEQFGGPDAFINIKYLIPTYESC 343
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: A0A7S3Y211_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y211_HETAK) HSP 1 Score: 275 bits (704), Expect = 3.180e-87 Identity = 136/203 (67.00%), Postives = 163/203 (80.30%), Query Frame = 1
Query: 895 PPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREAN-PFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
P KAGA+R RPI ATLFR+YY RGDLP+ V+HRA GN+ RW LD+H+YLPIF DG+RE + P+RFLAVQGTLDM+ APEKVLPVIPQ+ILP+ ALNTR P IICP LKVLQQM+L +P+VG+ALVPYYRQ+LPV NL+R ++ N+GD I YNQR R ++ L+ ETLE ++E GGPDAFINIKYMIPTYESC
Sbjct: 2 PDKAGAYRYRPIEATLFRRYYDRGDLPVVVEHRAAGNSTRWTRDLYELDYHIYLPIFVDGLRERDDPYRFLAVQGTLDMVLVAPEKVLPVIPQIILPLKAALNTRHPVIICPALKVLQQMVLQNPLVGQALVPYYRQLLPVFNLYRARDENLGDGIAYNQRQRTNVAELIRETLE----ILEVHGGPDAFINIKYMIPTYESC 200
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: A0CJS0_PARTE (Uncharacterized protein n=3 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CJS0_PARTE) HSP 1 Score: 256 bits (654), Expect = 4.000e-78 Identity = 127/205 (61.95%), Postives = 161/205 (78.54%), Query Frame = 1
Query: 889 PAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREA-NPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
PAPPKAGA+ +R I+ + FR+YY RGDLPI VDH+ + N I WKI P LD+H YLPIFFDG+RE +P+RFLA+ GT ++E K+LPVIPQLI+PI T LNTR+P I+ LKVLQ+++L MVGEALVPYYRQ+LP++NL++ +NSN+GD I+YNQR RV++G L+ ETLE + EQ GG DA+INIKYMIPTYESC
Sbjct: 112 PAPPKAGAYDQRTISVSDFRRYYDRGDLPIKVDHQGSVNRIIWKISPEQLDYHHYLPIFFDGLREKMDPYRFLAILGTYGLLENGGNKILPVIPQLIIPIKTNLNTRDPSIMEVQLKVLQKLVLSGEMVGEALVPYYRQLLPIMNLYKNRNSNLGDFIEYNQRKRVNVGDLIQETLE----LFEQTGGEDAYINIKYMIPTYESC 312
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: A0A1R2C2S2_9CILI (Uncharacterized protein n=3 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C2S2_9CILI) HSP 1 Score: 251 bits (640), Expect = 3.580e-76 Identity = 126/203 (62.07%), Postives = 156/203 (76.85%), Query Frame = 1
Query: 895 PPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVRE-ANPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
PPKAGA+ RR I ++ FR++Y RGD+PI V H N I WK+ LD+H YLPIFFDG+RE ++P+RFLA+QG DM+E KVLPVIPQLI+PI TALNTR+P IIC +LK+LQ+++ + M+GEALVPYYRQILPV N+F+ KN+N GD IDY QR R +IG L+ ETLE ++E GG DAFINIKYMIPTYESC
Sbjct: 105 PPKAGAFNRRSIPSSEFRRFYDRGDMPIAVSH-GGTNKIVWKVAVDQLDYHHYLPIFFDGLREKSDPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPIKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKQKNANYGDKIDYAQRKRQNIGELIQETLE----LLETTGGEDAFINIKYMIPTYESC 302
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: A0A3M7RJE3_BRAPC (Parkin coregulated protein n=2 Tax=Brachionus TaxID=10194 RepID=A0A3M7RJE3_BRAPC) HSP 1 Score: 247 bits (631), Expect = 8.050e-76 Identity = 122/203 (60.10%), Postives = 149/203 (73.40%), Query Frame = 1
Query: 895 PPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREA-NPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
PP GA+ RP T FRK+Y+RGD PI ++H GN I WK+ LD+H YLP+FFDG+ E +PF F A QG DM+E K+LPVIPQLI+PI ALNTR PR+IC LK+LQQ++L + M+GEALVPYYRQILP+ NLF+ NSN+GD IDY+Q+ R +IG L+ ETLE V E+ GG DAFINIKYMIPTYESC
Sbjct: 33 PPNVGAFSERPSKPTAFRKFYLRGDFPIALEHDTKGNKIAWKVEIEKLDYHHYLPLFFDGLCETEHPFEFFARQGIHDMLEHGGNKILPVIPQLIIPIKNALNTRNPRVICVTLKILQQLVLSADMIGEALVPYYRQILPIFNLFKNFNSNLGDGIDYSQQKRENIGDLINETLE----VFERHGGEDAFINIKYMIPTYESC 231
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: UPI001B88C000 (parkin coregulated gene protein homolog isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C000) HSP 1 Score: 247 bits (631), Expect = 1.320e-75 Identity = 121/212 (57.08%), Postives = 153/212 (72.17%), Query Frame = 1
Query: 868 FTRRRRLPAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREA-NPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
+ R + + PP+AGA++++ A T FRK+Y RGD PI ++H GN I WK+ LD+H YLP+FFDG E +P+ F A QG DM+E K+LPVIPQLI+PI ALNTR PR++CP LK LQ +++ MVGEALVPYYRQILPVLN+F+ KN N GD IDY+Q+ R +IG L+ ETLEA E+ GG DAFINIKYM+PTYESC
Sbjct: 39 YKRHQEVQGPPRAGAFKQKQTAPTAFRKFYERGDFPIALEHDTKGNKIAWKVEIEKLDYHHYLPLFFDGFCETVHPYEFFARQGVHDMLEHGGTKILPVIPQLIIPIKNALNTRNPRVLCPTLKALQHLVISGDMVGEALVPYYRQILPVLNIFKNKNLNSGDGIDYSQQKRENIGDLIQETLEAF----ERHGGEDAFINIKYMVPTYESC 246
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: A0A8J1W6P1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1W6P1_9DINO) HSP 1 Score: 248 bits (634), Expect = 1.320e-75 Identity = 127/206 (61.65%), Postives = 153/206 (74.27%), Query Frame = 1
Query: 886 LPAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREA-NPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
L PPKAGA RRPIAAT FR++Y RGDLPI + H A G I WK+ LD+H YLPIFFDG+RE +P+RFLAVQG DM+ K+LPV+PQLI+PI TALNTR I+C +KVL Q++L + MVGEALVPYYRQILP+ N+F+G N+GD +DY+QR R+++G LV E LE V E GG DAFINIKYMIPTYESC
Sbjct: 77 LKPPPKAGATMRRPIAATEFRRFYDRGDLPIQIFHGAAGGKIAWKVEIEKLDYHHYLPIFFDGLREREDPYRFLAVQGVYDMLAKGGSKILPVVPQLIIPIKTALNTRCEEIVCTTIKVLIQLVLSADMVGEALVPYYRQILPIFNIFKGHTKNVGDQMDYSQRKRLNLGELVNEALE----VFETHGGEDAFINIKYMIPTYESC 278
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: A0A6T7Z7R8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7Z7R8_9EUKA) HSP 1 Score: 249 bits (636), Expect = 1.710e-75 Identity = 128/204 (62.75%), Postives = 153/204 (75.00%), Query Frame = 1
Query: 895 PPKAGAWRRRPIAA-TLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREAN-PFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
PP GA+R R T FR++Y RGDLPI V+HR N I WK+ LD+H YLPIFFDG+RE P+RFLAVQG DM+E K+LPVIPQLI+PI TALNTR+P IIC VLKVLQQM++ M+GEALVPYYRQILP+ NLF+ KN+N+GD IDY+Q+ R +G L++ETLE + E GG DAFINIKYMIPTYESC
Sbjct: 109 PPICGAFRERANPPNTEFRRFYERGDLPIQVEHRGVHNRIGWKVDIEKLDYHHYLPIFFDGLREKEEPYRFLAVQGVFDMLENGGSKILPVIPQLIIPIKTALNTRDPPIICTVLKVLQQMVVSGEMIGEALVPYYRQILPIFNLFKSKNNNLGDGIDYSQQKRKTLGDLIVETLE----MFEIHGGEDAFINIKYMIPTYESC 308
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Match: A0A0G4GIH8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GIH8_VITBC) HSP 1 Score: 249 bits (636), Expect = 1.820e-75 Identity = 124/206 (60.19%), Postives = 154/206 (74.76%), Query Frame = 1
Query: 886 LPAPPKAGAWRRRPIAATLFRKYYVRGDLPICVDHRANGNAIRWKICPAVLDFHVYLPIFFDGVREA-NPFRFLAVQGTLDMMEGAPEKVLPVIPQLILPITTALNTREPRIICPVLKVLQQMILLSPMVGEALVPYYRQILPVLNLFRGKNSNMGDAIDYNQRSRVDIGVLVLETLEAITSVMEQFGGPDAFINIKYMIPTYESC 1500
L PPKAGA+ +RPI + FR++Y RGDLPI V H GN I WK+ P LD+H YLPIFFDG+RE +P+RFLAVQG D++E K+LPV+PQLI+PI TALNTR+ I+C +LKVLQ ++L MVGEALVPYYRQILPV NL++ + ++ GD +DY QR R ++G L+ ETLE + E GG DAFINIKYMIPTYESC
Sbjct: 109 LAPPPKAGAYSKRPIPPSEFRRFYDRGDLPINVFHGGTGNKIAWKVKPEQLDYHHYLPIFFDGLREKEDPYRFLAVQGVFDLLEAGGSKILPVVPQLIIPIKTALNTRDHDIMCTMLKVLQALVLSGEMVGEALVPYYRQILPVFNLYKNRKTSTGDQMDYGQRKRANLGELIEETLE----LFEIHGGEDAFINIKYMIPTYESC 310 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1024.381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1024.381.1 >prot_P-canaliculata_contig1024.381.1 ID=prot_P-canaliculata_contig1024.381.1|Name=mRNA_P-canaliculata_contig1024.381.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=503bp MKYYVGVSAVPRDPTIGSSMIVQDYIATHFRDEKPIAQRYKPKGMDSCFGback to top mRNA from alignment at P-canaliculata_contig1024:14466..23795- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig1024.381.1 ID=mRNA_P-canaliculata_contig1024.381.1|Name=mRNA_P-canaliculata_contig1024.381.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=9330bp|location=Sequence derived from alignment at P-canaliculata_contig1024:14466..23795- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig1024:14466..23795- >mRNA_P-canaliculata_contig1024.381.1 ID=mRNA_P-canaliculata_contig1024.381.1|Name=mRNA_P-canaliculata_contig1024.381.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3018bp|location=Sequence derived from alignment at P-canaliculata_contig1024:14466..23795- (Pelvetia canaliculata dioecious)back to top |