mRNA_P-canaliculata_contig10238.377.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: D7FWH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH7_ECTSI) HSP 1 Score: 273 bits (699), Expect = 4.290e-91 Identity = 131/153 (85.62%), Postives = 144/153 (94.12%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLKANALAGSGRGHSRPAPSQ 459
I SPPFEVTEMGWGEFEAKMTMHFKDP+E+PVD+LHQLRLYHD A GTTQPKKAVV+EFYDEVVFTDPYEEFY+TLMQGQKL+PQRKHEHQEHFSTFSDGDTLQRLA+AREWVHNQLRETKD+IRKADM++AQLKA+A A SGRG R + +Q
Sbjct: 81 ITSPPFEVTEMGWGEFEAKMTMHFKDPNEKPVDVLHQLRLYHDPATGTTQPKKAVVAEFYDEVVFTDPYEEFYNTLMQGQKLLPQRKHEHQEHFSTFSDGDTLQRLAAAREWVHNQLRETKDRIRKADMDMAQLKASATASSGRGLGRGSTAQ 233
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: A0A835ZJW2_9STRA (Yeats family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW2_9STRA) HSP 1 Score: 132 bits (331), Expect = 6.000e-35 Identity = 65/134 (48.51%), Postives = 92/134 (68.66%), Query Frame = 1
Query: 13 PFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLKANA 414
P+EVTE GWGEFEAK+T+HFKDP+ERP+D+ H ++LY DA P VV+E YDE+VFTDP E F+ LM+GQ R+H +++ FS + +Q+LA+ARE+VH +L KD+I + D +I A++
Sbjct: 80 PYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAV-REHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPASS 212
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: A0A2D4BFL2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFL2_PYTIN) HSP 1 Score: 120 bits (302), Expect = 3.960e-31 Identity = 65/138 (47.10%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRK---HEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 405
+ PP+EVTE GWGEFE ++ +HF DPSE+PVDI+H L LY + KK VVSEFYDE+VF +P E Y LM G P+R+ H QEHF +SD L+ LA A V +++ +TK+K+ +A++E+ +LK
Sbjct: 70 LTEPPYEVTEYGWGEFETRIQIHFHDPSEKPVDIIHMLVLYPPGNQPAST-KKPVVSEFYDELVFNEPTEFLYKKLMAG----PEREAPPHPMQEHFPVYSDAAILKTLAQANSLVSDEIDDTKNKLLQAELELKELK 202
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: A0A8K1CG01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG01_PYTOL) HSP 1 Score: 119 bits (298), Expect = 1.390e-30 Identity = 63/136 (46.32%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQG-QKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 405
+ PP+EVTE GWGEFE ++ +HF DP+E+PVDI+H L LY + KK V+SEFYDE+VF +P E FY LM G +K P + QEHF +SD L+ L+ A+++ ++++ TKD + AD+EI +LK
Sbjct: 70 LTEPPYEVTEFGWGEFETRIQLHFHDPNEKPVDIIHMLVLYPPGNLPAST-KKPVISEFYDELVFNEPTEFFYKKLMAGPEKEAP--AYSMQEHFPVYSDVAILKTLSQAQQFTKDEIQATKDLLLHADLEIKELK 202
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: A0A3F2RH13_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH13_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.450e-30 Identity = 66/141 (46.81%), Postives = 94/141 (66.67%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLY--HDAAAGTTQ-PKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEH---QEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 405
+ PP+EVTE+GWGEFE ++ ++F DP+ERP+ I+H L LY + A T + P K VVSEFYDE+VF +P E FY LM G P R+ QEH ST+SD + L+ LA A+ +V ++++TK+ + AD+EI +LK
Sbjct: 70 LTEPPYEVTELGWGEFETRIQIYFHDPNERPISIIHLLVLYPPNSQPASTKKVPSKPVVSEFYDELVFNEPTEFFYKKLMAG----PDRQSPPLAMQEHLSTYSDVEVLKTLAHAQTFVTKEIQDTKNLLLDADLEIKELK 206
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: A0A662WIU5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIU5_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.970e-29 Identity = 64/138 (46.38%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEH---QEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 405
+ PP+EVTE+GWGEFE ++ +HF DP+ERP+ I+H L LY ++ + KK VVSEFYDE+VF +P E FY LM G P R+ Q++ T+SD L+ LA A+ +V + ++TKD + ADMEI +LK
Sbjct: 82 LTEPPYEVTELGWGEFETRIQIHFHDPNERPISIIHMLVLYPPSSQPAST-KKPVVSEFYDELVFNEPTEFFYKKLMAG----PDREAPPLAMQDNLPTYSDVAVLKTLAQAQTFVTKETQDTKDLLLDADMEIKELK 214
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: H3HCS3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCS3_PHYRM) HSP 1 Score: 113 bits (283), Expect = 7.100e-29 Identity = 62/138 (44.93%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEH---QEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 405
+ PP+EVTE+GWGEFE ++ ++F DP+ERP+ I+H L LY + + KK VVSEFYDE+VF +P E FY LM G P R+ Q+H T+SD + L+ LA +V ++++TK+ + ADMEI +LK
Sbjct: 17 LTEPPYEVTELGWGEFETRIQIYFHDPNERPISIIHLLVLYPPNSQPAST-KKPVVSEFYDELVFNEPTEFFYKKLMAG----PDRQAPPLAMQDHLPTYSDVELLKTLARGESFVKKEIQDTKNLLLSADMEIKELK 149
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: G4ZIH5_PHYSP (Uncharacterized protein (Fragment) n=5 Tax=Peronosporaceae TaxID=4777 RepID=G4ZIH5_PHYSP) HSP 1 Score: 114 bits (286), Expect = 8.450e-29 Identity = 63/138 (45.65%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEH---QEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 405
+ PP+EVTE+GWGEFE ++ ++F DP+ERP+ I+H L LY + + KK VVSEFYDE+VF +P E FY LM G P R+ Q+H T+SD + L+ LA A +V ++++TK+ + ADMEI +LK
Sbjct: 70 LTEPPYEVTELGWGEFETRIQIYFHDPTERPISIIHLLVLYPPNSQPAST-KKPVVSEFYDELVFNEPTEFFYKKLMAG----PDRQAPPLALQDHLPTYSDVEVLKTLAHAETFVTKEIQDTKNLLLSADMEIKELK 202
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: D0MUY9_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MUY9_PHYIT) HSP 1 Score: 115 bits (289), Expect = 3.580e-28 Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEH---QEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEIAQLK 405
++ PP+EVTE+GWGEFE ++ ++F DP+ERP+ I+H L LY + + KK VVSEFYDE+VF +P E FY LM G P R+ Q+H T+SD + L+ LA A +V ++++TK+ + AD+EI +LK
Sbjct: 67 VREPPYEVTELGWGEFETRIQIYFHDPNERPISIIHLLVLYPPNSQPAST-KKPVVSEFYDELVFNEPTEFFYKKLMAG----PDRQSPPLTMQDHLPTYSDVEVLKTLARAENFVQKEVQDTKNLLLSADVEIKELK 199
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Match: A0A7S3ZZU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZU1_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.220e-28 Identity = 65/134 (48.51%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 1 IKSPPFEVTEMGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKA---VVSEFYDEVVFTDPYEEFYDTLMQGQKLMPQRKHEHQEHFSTFSDGDTLQRLASAREWVHNQLRETKDKIRKADMEI 393
+ PPFEV+E GWGEFE + +HFKDP+E+PV++ H ++LY GTT P+ A VVSE YDEVVFTDP E FY LM K P H HFS F D ++ L A E+V QL+ KD I + D +I
Sbjct: 101 VTKPPFEVSEKGWGEFECHIRIHFKDPTEKPVEVSHIVKLYD----GTT-PQAANQPVVSEVYDEVVFTDPREPFYQQLMAASKE-PTEPHPLNGHFSKFEDAAEVETLVKAGEYVAGQLQTVKDSIARLDHQI 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10238.377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10238.377.1 >prot_P-canaliculata_contig10238.377.1 ID=prot_P-canaliculata_contig10238.377.1|Name=mRNA_P-canaliculata_contig10238.377.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=147bp MGWGEFEAKMTMHFKDPSERPVDILHQLRLYHDAAAGTTQPKKAVVSEFYback to top mRNA from alignment at P-canaliculata_contig10238:4707..6252+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10238.377.1 ID=mRNA_P-canaliculata_contig10238.377.1|Name=mRNA_P-canaliculata_contig10238.377.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1546bp|location=Sequence derived from alignment at P-canaliculata_contig10238:4707..6252+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10238:4707..6252+ >mRNA_P-canaliculata_contig10238.377.1 ID=mRNA_P-canaliculata_contig10238.377.1|Name=mRNA_P-canaliculata_contig10238.377.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at P-canaliculata_contig10238:4707..6252+ (Pelvetia canaliculata dioecious)back to top |