Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 444 |
| Cds size | 444 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815596.8419044-CDS-P-canaliculata_contig102295:26..470 | 1622815596.8419044-CDS-P-canaliculata_contig102295:26..470 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig102295 27..470 - |
| 1693494157.4009142-CDS-P-canaliculata_contig102295:26..470 | 1693494157.4009142-CDS-P-canaliculata_contig102295:26..470 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig102295 27..470 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102295.363.1 >prot_P-canaliculata_contig102295.363.1 ID=prot_P-canaliculata_contig102295.363.1|Name=mRNA_P-canaliculata_contig102295.363.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=148bp
EAQVSEKAAQLKGQIQSGQNLIKYLLDSQGGESMLQYAALKRLEGSEDPN
GDVGSKVAKYVELLEVHKNKTITSWVNTSATVAASVPDKEMAFQIQSMLS
ASSEKTLTVRQLLGSVIRIGGEDRSNEVQQFSIEALAADIRSETASND back to topmRNA from alignment at P-canaliculata_contig102295:27..470- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig102295.363.1 ID=mRNA_P-canaliculata_contig102295.363.1|Name=mRNA_P-canaliculata_contig102295.363.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=444bp|location=Sequence derived from alignment at P-canaliculata_contig102295:27..470- (Pelvetia canaliculata dioecious)
GAAGCTCAGGTAAGCGAAAAAGCTGCTCAGCTCAAAGGACAAATTCAATC
GGGTCAGAATTTGATAAAGTACTTATTAGATTCACAGGGTGGGGAGTCAA
TGCTGCAGTACGCTGCATTGAAGCGACTCGAGGGCAGCGAAGATCCTAAC
GGTGATGTAGGAAGTAAAGTAGCCAAATACGTAGAATTGCTGGAGGTACA
TAAGAATAAAACCATCACTTCCTGGGTAAACACTTCTGCCACTGTGGCGG
CGAGCGTACCGGATAAGGAAATGGCTTTTCAAATTCAATCAATGCTATCG
GCATCCTCCGAAAAGACCTTGACCGTGCGCCAACTTTTAGGCTCTGTAAT
CAGGATTGGAGGCGAAGATCGTAGCAACGAAGTCCAGCAATTTTCGATAG
AAGCTCTTGCAGCTGACATAAGATCGGAAACAGCCTCAAACGAT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig102295:27..470- >mRNA_P-canaliculata_contig102295.363.1 ID=mRNA_P-canaliculata_contig102295.363.1|Name=mRNA_P-canaliculata_contig102295.363.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at P-canaliculata_contig102295:27..470- (Pelvetia canaliculata dioecious)
GAAGCTCAGGTAAGCGAAAAAGCTGCTCAGCTCAAAGGACAAATTCAATC
GGGTCAGAATTTGATAAAGTACTTATTAGATTCACAGGGTGGGGAGTCAA
TGCTGCAGTACGCTGCATTGAAGCGACTCGAGGGCAGCGAAGATCCTAAC
GGTGATGTAGGAAGTAAAGTAGCCAAATACGTAGAATTGCTGGAGGTACA
TAAGAATAAAACCATCACTTCCTGGGTAAACACTTCTGCCACTGTGGCGG
CGAGCGTACCGGATAAGGAAATGGCTTTTCAAATTCAATCAATGCTATCG
GCATCCTCCGAAAAGACCTTGACCGTGCGCCAACTTTTAGGCTCTGTAAT
CAGGATTGGAGGCGAAGATCGTAGCAACGAAGTCCAGCAATTTTCGATAG
AAGCTCTTGCAGCTGACATAAGATCGGAAACAGCCTCAAACGATGAAGCT
CAGGTAAGCGAAAAAGCTGCTCAGCTCAAAGGACAAATTCAATCGGGTCA
GAATTTGATAAAGTACTTATTAGATTCACAGGGTGGGGAGTCAATGCTGC
AGTACGCTGCATTGAAGCGACTCGAGGGCAGCGAAGATCCTAACGGTGAT
GTAGGAAGTAAAGTAGCCAAATACGTAGAATTGCTGGAGGTACATAAGAA
TAAAACCATCACTTCCTGGGTAAACACTTCTGCCACTGTGGCGGCGAGCG
TACCGGATAAGGAAATGGCTTTTCAAATTCAATCAATGCTATCGGCATCC
TCCGAAAAGACCTTGACCGTGCGCCAACTTTTAGGCTCTGTAATCAGGAT
TGGAGGCGAAGATCGTAGCAACGAAGTCCAGCAATTTTCGATAGAAGCTC
TTGCAGCTGACATAAGATCGGAAACAGCCTCAAACGAT back to top
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