Homology
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
D7FKW1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI)
HSP 1 Score: 137 bits (345), Expect = 2.010e-38
Identity = 69/90 (76.67%), Postives = 82/90 (91.11%), Query Frame = 1
Query: 4 MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIY 273
M LARQD+DLEELGTHVERVGETA +INEELR QNR+LTALD+D++E TE MNFVMGRLGKLLKTKSKCQIWT+++LS + II+V ++IY
Sbjct: 161 MQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIY 250
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A7S2S2P5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2P5_9STRA)
HSP 1 Score: 97.4 bits (241), Expect = 9.640e-24
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 4 MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 276
M + +QD+DLEELG V+RV + A IN EL+ QNRML L+ DL+E TE+MNFVMG+L KLLKTK CQIWTV+IL +FL+IYT
Sbjct: 72 MIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIYT 162
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A7S2FMQ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA)
HSP 1 Score: 99.0 bits (245), Expect = 1.700e-23
Identity = 54/92 (58.70%), Postives = 69/92 (75.00%), Query Frame = 1
Query: 1 QMHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 276
QM + +QD++LEELG V+RV + A INEEL+ QN+ML L+ED++E E+MNFVMG++ KLLKTK CQIWTV+IL VFLVIYT
Sbjct: 155 QMIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIILVXXXXXXVFLVIYT 246
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A7S2S2M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA)
HSP 1 Score: 97.4 bits (241), Expect = 6.670e-23
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 4 MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 276
M + +QD+DLEELG V+RV + A IN EL+ QNRML L+ DL+E TE+MNFVMG+L KLLKTK CQIWTV+IL +FL+IYT
Sbjct: 156 MIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIYT 246
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A836CAK7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA)
HSP 1 Score: 94.4 bits (233), Expect = 1.090e-21
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 7 HLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 276
H+ARQDQDLEELG HV+RVG A INEELR+Q RML L+ED+ T E M VMG + K+LKTK + QIW +V L FLV+YT
Sbjct: 160 HIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLIVTLVVXXXXXXFLVVYT 249
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A067BS24_SAPPC (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BS24_SAPPC)
HSP 1 Score: 93.6 bits (231), Expect = 2.150e-21
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 1
Query: 1 QMHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 276
Q + QD+DL+EL T V R+G+ A IN E++ QN ML +D DL++TTERMNFVMG++ +LLKTK CQ+ ++ L+ + +IMVFLVIYT
Sbjct: 158 QQIIKEQDKDLDELHTSVSRLGQVAVTINSEIKSQNDMLKDVDADLDDTTERMNFVMGKMSRLLKTKDTCQLGGIIFLTIVLLIMVFLVIYT 249
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A8J2AWH8_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2AWH8_9DINO)
HSP 1 Score: 89.4 bits (220), Expect = 1.660e-19
Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 10 LARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVI 270
+A+QD+ L EL ER+ +TA +IN EL EQ RMLT LDED++ TE+MNFVM RLG L+KT + Q+WT++IL C+F+ ++ LVI
Sbjct: 199 VAKQDEQLNELSKCTERLNQTALVINTELNEQARMLTELDEDIDRETEKMNFVMRRLGILMKTSNSKQLWTILILFCVFMFLLMLVI 285
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A813HEU1_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HEU1_POLGL)
HSP 1 Score: 84.0 bits (206), Expect = 4.570e-19
Identity = 43/89 (48.31%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 10 LARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 276
+++QD+ L++L +R+G TA IIN ELREQ +ML ALDED+++ TE++NFVM R+G+LLKT Q+ ++ L L ++++FLVI T
Sbjct: 20 VSQQDEALDQLSASAQRLGNTAQIINSELREQQKMLEALDEDIDKETEKLNFVMKRMGRLLKTSDNKQLCLIIGLIALIVVLIFLVINT 108
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A1V9ZQ80_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ80_9STRA)
HSP 1 Score: 87.4 bits (215), Expect = 4.870e-19
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
Query: 1 QMHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 276
Q + QD L++L T V R+G A IN E++ QN ML ++ DL++TTERMNFVM R+ KLLKTK CQ+ ++IL+ + +IMVFLVIYT
Sbjct: 157 QQIIKEQDTSLDQLHTSVTRIGHVAVAINTEIKSQNVMLKDVEADLDDTTERMNFVMARMSKLLKTKDTCQLSGIIILTIVLMIMVFLVIYT 248
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match:
A0A8J2EUW4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2EUW4_9DINO)
HSP 1 Score: 86.3 bits (212), Expect = 1.870e-18
Identity = 44/87 (50.57%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 10 LARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVI 270
++RQD+ L EL ER+ +TA +IN EL EQ RMLT LDED++ TE++NFV+ RLG L+KT Q+WT+++L C+F+ ++ LVI
Sbjct: 181 VSRQDEQLAELSKTTERLNQTALVINTELTEQARMLTELDEDIDRETEKLNFVLRRLGILMKTSDSKQLWTILVLFCIFMFLLMLVI 267
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.01e-38 / Id = 76.67 Expect = 9.64e-24 / Id = 59.34 Expect = 1.70e-23 / Id = 58.70 Expect = 6.67e-23 / Id = 59.34 Expect = 1.09e-21 / Id = 57.78 Expect = 2.15e-21 / Id = 53.26 Expect = 1.66e-19 / Id = 54.02 Expect = 4.57e-19 / Id = 48.31 Expect = 4.87e-19 / Id = 52.17 Expect = 1.87e-18 / Id = 50.57 Sequence D7FKW1_ECTSI A0A7S2S2P5_9STRA A0A7S2FMQ2_9STRA A0A7S2S2M2_9STRA A0A836CAK7_9STRA A0A067BS24_SAPPC A0A8J2AWH8_9DINO A0A813HEU1_POLGL A0A1V9ZQ80_9STRA A0A8J2EUW4_9DINO Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 139.0 Seed ortholog evalue 1.1e-30 Seed eggNOG ortholog 2880.D7FKW1 Preferred name STX6 KEGG ko ko:K02925,ko:K03691,ko:K08498,ko:K08499,ko:K08500 KEGG Reaction R09295 KEGG Pathway ko00514,ko03010,ko04130,map00514,map03010,map04130 KEGG Module M00177 GOs GO:0000138,GO:0000139,GO:0000149,GO:0001505,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005794,GO:0005795,GO:0005802,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006897,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007032,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008417,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0016740,GO:0016757,GO:0016758,GO:0017156,GO:0019538,GO:0019905,GO:0022406,GO:0023052,GO:0023061,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030285,GO:0030424,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031201,GO:0031224,GO:0031300,GO:0031301,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0031985,GO:0032456,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0034613,GO:0034645,GO:0036065,GO:0036066,GO:0036211,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045335,GO:0046903,GO:0046907,GO:0046922,GO:0048278,GO:0048284,GO:0048471,GO:0048489,GO:0050789,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055037,GO:0060341,GO:0061024,GO:0061025,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0090161,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098563,GO:0098588,GO:0098657,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099501,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903827 EggNOG free text desc. SNAP receptor activity EggNOG OGs KOG3202@1,KOG3202@2759 EC 2.4.1.221 COG Functional cat. U CAZy GT65,GT68 Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE br01610,ko00000,ko00001,ko00002,ko01000,ko01003,ko03011,ko04131 Hectar predicted targeting category signal anchor Ec32 ortholog description Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) Ec32 ortholog Ec-17_001570.1 Exons 3 Model size 279 Cds size 276 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815596.2522347-CDS-P-canaliculata_contig10226:6621..6698 1622815596.2522347-CDS-P-canaliculata_contig10226:6621..6698 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10226 6622..6698 - 1693494156.995564-CDS-P-canaliculata_contig10226:6621..6698 1693494156.995564-CDS-P-canaliculata_contig10226:6621..6698 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10226 6622..6698 - 1622815596.2722502-CDS-P-canaliculata_contig10226:7134..7226 1622815596.2722502-CDS-P-canaliculata_contig10226:7134..7226 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10226 7135..7226 - 1693494157.009329-CDS-P-canaliculata_contig10226:7134..7226 1693494157.009329-CDS-P-canaliculata_contig10226:7134..7226 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10226 7135..7226 - 1622815596.2844396-CDS-P-canaliculata_contig10226:7811..7918 1622815596.2844396-CDS-P-canaliculata_contig10226:7811..7918 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10226 7812..7918 - 1693494157.0190797-CDS-P-canaliculata_contig10226:7811..7918 1693494157.0190797-CDS-P-canaliculata_contig10226:7811..7918 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10226 7812..7918 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815596.2967515-UTR-P-canaliculata_contig10226:7918..7921 1622815596.2967515-UTR-P-canaliculata_contig10226:7918..7921 Pelvetia canaliculata dioecious UTR P-canaliculata_contig10226 7919..7921 - 1693494157.0283375-UTR-P-canaliculata_contig10226:7918..7921 1693494157.0283375-UTR-P-canaliculata_contig10226:7918..7921 Pelvetia canaliculata dioecious UTR P-canaliculata_contig10226 7919..7921 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10226.359.1
>prot_P-canaliculata_contig10226.359.1 ID=prot_P-canaliculata_contig10226.359.1|Name=mRNA_P-canaliculata_contig10226.359.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=92bp
MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTE back to top mRNA from alignment at P-canaliculata_contig10226:6622..7921-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10226.359.1 ID=mRNA_P-canaliculata_contig10226.359.1|Name=mRNA_P-canaliculata_contig10226.359.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1300bp|location=Sequence derived from alignment at P-canaliculata_contig10226:6622..7921- (Pelvetia canaliculata dioecious)CAG ATGCACTTGGCCCGACAAGATCAAGACCTTGAGGAGTTGGGTACTCA
TGTCGAACGAGTCGGCGAGACGGCTAATATCATCAACGAGGAGCTCCGGG
AACAAAACAG GTATTAGTGATACGATGCCAGCTTGACGGGCGAAATAAGG
TATATAGCTCTAAGGACGAGGTCGTTGTGCGAAGTGAAGCTCTAAGAAAT
ATCCGCGTTCCGGACATTTTTTTGTGTTTGATGTTTCCCGGTGCCACGCC
CCCCCCAACATGTTAGCTAATTAGAGCCTGATATCTACACATTTTCAGTT
GGCTAATTAGAGCTAACGGCACAGTCTTCGCCGGACCTCGAAAAGCTGCT
TGGTCCTCGCTCTGTTTGCCAATCGACTCGCTATCTCTTGCGAGTATAAA
CATAACAGGTGAGAATTCCAAAATAATTATGGGACAACATGGGGTTACGC
GTCTTGCCTTCCGTCCCCGTTTTTCCAGATTCCGCCCCCCTTTAGAGCAC
GATAATTTTTTAATTCACGAAAATAATTCGACTAGGTTTATTTCTAGACT
CGGGCATCATTTTTTTTTCATTCTCGCTACATCCAGTAACAGCCAATTTC
GTATTTCGTATTTCCCGAACTTTGATTTTTCTCGTGAGATAAGCAATTTA
CTTACTGTACGGGTACCAATCGCATTTACTGATTTTCGATTCCAGAATGC
TGACAGCGTTAGATGAAGACCTGGAGGAAACCACGGAGCGTATGAACTTC
GTCATGGGACGGCTGGGTAAACTTCTCAAGACGAAAA GTGGGTGACTTTC
GATTGCGTTATGGAATATTTAGGGAAGAAAATGTCTGACGATCTGAATAA
AACAGACCAAGCTGCGGAAGACTGCGAAGGCTGACGACCTATTCATAGAG
ATTTGCTATGGCGTGAAGTATCTTGAAGTTAACGGTAAATGAAAGACTGC
TTCCAGACCTGAACAGGTCATAGGCATGAACGGCGGTGCAGGTGTAAAGG
TGCGATGGTCAAAGGATCTGCCTGCTGCATTCCATTCGACCCACCCTCCA
AACTGAAATGAAGAGCGCGGAAATCGCCAACGAGAGAGTGACGAAAACAC
TCGACGAAAAAGTGTCCAAACTCGCTCTTTTTTTATACTTGTATTGTTTT
AAGCTTTGGAGTCTACGCCCATCCCGTACTCCCCGTTCGTCTGCGTTGTT
TTTATTAACTCATCACATCATAGGTAAATGCCAGATTTGGACTGTGGTGA
TCTTGTCGTGTCTCTTCATCATCATGGTCTTCTTGGTAATATACACTTAG
back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10226:6622..7921-
>mRNA_P-canaliculata_contig10226.359.1 ID=mRNA_P-canaliculata_contig10226.359.1|Name=mRNA_P-canaliculata_contig10226.359.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=552bp|location=Sequence derived from alignment at P-canaliculata_contig10226:6622..7921- (Pelvetia canaliculata dioecious) back to top