mRNA_P-canaliculata_contig102212.353.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A7T4YEN3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7T4YEN3_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 1.270e-18 Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAALDGA 213 SV D+I LQA+WFAL++L +LP +E+ALG DRAGVL+ +H L R+D++ +P MVELID A +L A Sbjct: 47 SVVDVIMLQAVWFALENLKDLPREEQALGVDRAGVLVAKHVGELERRYDNQDMPGLMVELIDDAEKSLHAA 117
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A7X0H787_9BACT (Uncharacterized protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H787_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 1.970e-17 Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAAL 204 +VPD+I LQA+WF+L++LDEL DERALG D+A VLI +H AL + + +E +P ++ELI A+ AL Sbjct: 48 AVPDIITLQAVWFSLENLDELDADERALGLDKAQVLIEKHTAALEQAWAEEPMPKELLELIHDAKTAL 115
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A2E2B1U3_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2E2B1U3_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 3.250e-17 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELI 183 SVPDLI LQA+WFALQH+DEL D++ALG DRAGVLI +HA LR R+ + +P + LI Sbjct: 45 SVPDLIMLQAVWFALQHMDELSADQQALGLDRAGVLIDQHAGVLRSRWAPDTLPQRIENLI 105
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A2D6LMA0_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D6LMA0_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 6.530e-17 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAAL 204 SV DLI LQA+WFALQ+LD+L PDERALG DRA +LI +HA LR + D +P + ELI+ A L Sbjct: 47 SVVDLITLQAVWFALQNLDDLDPDERALGIDRADLLIQQHAKVLRRCWGDADLPPQVSELIEQATRQL 114
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A518BZF7_9BACT (Uncharacterized protein n=1 Tax=Mucisphaera calidilacus TaxID=2527982 RepID=A0A518BZF7_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 1.860e-16 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAAL 204 + PDLI LQAIWFALQHL ELPP+++ALGRDRA V I L + + E +P + L++ A++AL Sbjct: 51 ATPDLISLQAIWFALQHLHELPPEQQALGRDRAAVQIASSTRNLNQLWSPEPLPENVASLVEDAQSAL 118
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A7G9NZG5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NZG5_9BACT) HSP 1 Score: 75.1 bits (183), Expect = 7.850e-16 Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAAL 204 SVPD+I LQA+ AL + L PDERALG DRA VLI RH L F DEG+PA + ELID A A+ Sbjct: 41 SVPDIIGLQAVTMALGEAELLEPDERALGLDRARVLIQRHTRNLHTLFKDEGLPAKLTELIDDANDAV 108
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A2D5YZP3_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5YZP3_9PLAN) HSP 1 Score: 75.1 bits (183), Expect = 1.280e-15 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAALDGA 213 SVP +I LQA+ AL+ +DELP DERALG DRA +L+ RH LRE F +PA + EL+ AR A++ A Sbjct: 62 SVPAIIGLQALCMALKEVDELPADERALGVDRARILLDRHTAGLREAFGPGELPAMLEELVSDARGAIEAA 132
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A3C0ESB5_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3C0ESB5_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 5.270e-15 Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAAL 204 SVPDLI LQA+WFALQH+DEL E+ALG DRA VL+ H L + E +P + +LI R L Sbjct: 59 SVPDLIMLQAVWFALQHMDELSAAEQALGLDRATVLVDHHTVQLNAHWQSEDLPQKIEQLITDVRQML 126
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A2E5G535_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2E5G535_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 2.040e-14 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAAL 204 SVPD+I LQA+WF+L+HLDEL P +RAL D A VLI +H++A+ R+ + +P + +LI A+ L Sbjct: 40 SVPDIIVLQAVWFSLEHLDELNPGDRALALDHAEVLIDKHSSAISLRWPPDSLPKLLQQLIGDAKDRL 107
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Match: A0A6I7PYW4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6I7PYW4_9BACT) HSP 1 Score: 72.0 bits (175), Expect = 1.360e-13 Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1 SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDEGVPAGMVELIDAARAAL 204 SV ++ LQA+ FAL DELP DERALG DRA VLI HA L E + E +P + ELID ARAAL Sbjct: 19 SVAPIVGLQAVVFALADTDELPDDERALGLDRADVLIRAHAADLHEAWRAEPMPPLVAELIDDARAAL 86 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102212.353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102212.353.1 >prot_P-canaliculata_contig102212.353.1 ID=prot_P-canaliculata_contig102212.353.1|Name=mRNA_P-canaliculata_contig102212.353.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=72bp SVPDLIQLQAIWFALQHLDELPPDERALGRDRAGVLITRHATALRERFDDback to top mRNA from alignment at P-canaliculata_contig102212:2..217+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig102212.353.1 ID=mRNA_P-canaliculata_contig102212.353.1|Name=mRNA_P-canaliculata_contig102212.353.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=216bp|location=Sequence derived from alignment at P-canaliculata_contig102212:2..217+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig102212:2..217+ >mRNA_P-canaliculata_contig102212.353.1 ID=mRNA_P-canaliculata_contig102212.353.1|Name=mRNA_P-canaliculata_contig102212.353.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=432bp|location=Sequence derived from alignment at P-canaliculata_contig102212:2..217+ (Pelvetia canaliculata dioecious)back to top |