Homology
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
UPI000CE2663F (dolichol-phosphate mannosyltransferase-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE2663F)
HSP 1 Score: 427 bits (1099), Expect = 3.410e-150
Identity = 207/237 (87.34%), Postives = 224/237 (94.51%), Query Frame = 1
Query: 73 KNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
KNKYSVLLPTYNER NLPIITWLL++MFT+NKLDWE+IIVDDGSPDGTQTIAKQLI+AYG +HIKL R GKLGLGTAYVHGLQFATGNF++IMDADFSHHPKF+PRMIAKQ EADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVL V++STE KGYSFQMEMMVRAKA G+ VAEVPISFVDRVYG SKLGSSEI++Y++GVM LW+SV
Sbjct: 5 KNKYSVLLPTYNERRNLPIITWLLERMFTQNKLDWEIIIVDDGSPDGTQTIAKQLIKAYGANHIKLQPRAGKLGLGTAYVHGLQFATGNFIIIMDADFSHHPKFLPRMIAKQKEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLQKVMNSTESKGYSFQMEMMVRAKAMGFKVAEVPISFVDRVYGDSKLGSSEIVEYLKGVMSLWVSV 241
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
A0A6A6Q5T1_9PEZI (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q5T1_9PEZI)
HSP 1 Score: 422 bits (1086), Expect = 3.760e-148
Identity = 210/245 (85.71%), Postives = 223/245 (91.02%), Query Frame = 1
Query: 67 MAKN-KYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAE-----ADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
MAKN KYSVLLPTYNER NLPII WLLQ+MFTENKLDWE++I+DDGSPDGTQTIAKQLI+AYG + IKLHTR+GKLGLGTAYVHGLQFATGNFV+IMDADFSHHPKFIP MIAKQAE YDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVL+PGVSDLTGSFRLYKKAVLDDVIHSTE KGYSFQMEMMVRAKAKGY VAEVPISFVDRVYG SKLG EI+ Y +GV+ LW+ V
Sbjct: 1 MAKNNKYSVLLPTYNERRNLPIIVWLLQRMFTENKLDWEILIIDDGSPDGTQTIAKQLIKAYGANRIKLHTRSGKLGLGTAYVHGLQFATGNFVIIMDADFSHHPKFIPLMIAKQAERGGGAGGYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLQPGVSDLTGSFRLYKKAVLDDVIHSTESKGYSFQMEMMVRAKAKGYSVAEVPISFVDRVYGDSKLGGDEIVNYAKGVLGLWLKV 245
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
A0A6H0XKI2_9PEZI (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XKI2_9PEZI)
HSP 1 Score: 406 bits (1043), Expect = 1.120e-141
Identity = 194/238 (81.51%), Postives = 216/238 (90.76%), Query Frame = 1
Query: 70 AKNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
+KNKYSVLLPTYNER+NLPII WLL+QMFTENKLDWEVIIVDDGSPDGTQ +AKQLI+A G + IKLHTR+GKLGLGTAYVHGLQFATGN+V+IMDADFSHHPKF+P MI KQ E D+DIVTGTRYAGDGGVYGWDLKRK+VSRGANLFADTVLRPGVSDLTGSFRLYKK VL +V++ TE KGY+FQMEMMVRAK G+ V EVPISFVDRVYG SKLG EI++Y++GVM LW+ V
Sbjct: 3 SKNKYSVLLPTYNERKNLPIICWLLEQMFTENKLDWEVIIVDDGSPDGTQDVAKQLIKAMGANRIKLHTRSGKLGLGTAYVHGLQFATGNYVIIMDADFSHHPKFLPLMIKKQKEGDWDIVTGTRYAGDGGVYGWDLKRKMVSRGANLFADTVLRPGVSDLTGSFRLYKKKVLQEVMNKTESKGYTFQMEMMVRAKGMGFRVTEVPISFVDRVYGESKLGGEEIVEYLKGVMNLWVKV 240
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
A0A4U6XSH6_9PEZI (Dolichol-phosphate mannosyltransferase subunit 1 n=2 Tax=Hypocreomycetidae TaxID=222543 RepID=A0A4U6XSH6_9PEZI)
HSP 1 Score: 402 bits (1033), Expect = 3.460e-140
Identity = 194/239 (81.17%), Postives = 214/239 (89.54%), Query Frame = 1
Query: 67 MAKNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
MA NKYSV+LPTYNER NLPI+TWLL + FTENKLDWE+IIVDDGSPDGTQ +A QL++AY P H+ L TRTGKLGLGTAYVHGLQF TGNFV+IMDADFSHHPKFIP+M+A+Q EA+YDIVTGTRYAGDGGVYGWDLKRK VSRGANLFADTVLRPGVSDLTGSFRLYKK+VLD VI STE KGY+FQMEMMVRAKA G VAEVPISFVDRVYG SKLG EI++Y +GV+ LW+ V
Sbjct: 1 MAVNKYSVILPTYNERRNLPIVTWLLNRTFTENKLDWELIIVDDGSPDGTQEVANQLVKAYAP-HVALKTRTGKLGLGTAYVHGLQFVTGNFVIIMDADFSHHPKFIPQMVARQKEANYDIVTGTRYAGDGGVYGWDLKRKFVSRGANLFADTVLRPGVSDLTGSFRLYKKSVLDKVISSTESKGYTFQMEMMVRAKAMGCSVAEVPISFVDRVYGDSKLGGDEIVEYAKGVLSLWLKV 238
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
N1PJB9_DOTSN (Dolichol-phosphate mannosyltransferase subunit 1 n=4 Tax=Mycosphaerellaceae TaxID=93133 RepID=N1PJB9_DOTSN)
HSP 1 Score: 401 bits (1031), Expect = 7.780e-140
Identity = 192/237 (81.01%), Postives = 214/237 (90.30%), Query Frame = 1
Query: 73 KNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
KNKYSVLLPTYNER NLPII WLL + FTE+KLDWEVIIVDDGSPDGTQ +AKQLI+AYG +HIKL R GKLGLGTAYVHGLQFATGNFV+IMDADFSHHPKF+P+MI KQAE YDIVTGTRYAG+GGVYGWDLKRK+VSRGANLFADTVLRPGVSDLTGSFRLYKK+VL +V++ TE KGY+FQMEMMVRAK G+ VAEVPISFVDRVYG SKLG EI++Y++GV+ LW+ V
Sbjct: 5 KNKYSVLLPTYNERRNLPIIVWLLNRTFTEHKLDWEVIIVDDGSPDGTQDVAKQLIKAYGANHIKLQPRAGKLGLGTAYVHGLQFATGNFVIIMDADFSHHPKFLPQMIKKQAEGSYDIVTGTRYAGNGGVYGWDLKRKMVSRGANLFADTVLRPGVSDLTGSFRLYKKSVLQEVMNRTESKGYTFQMEMMVRAKGMGFKVAEVPISFVDRVYGESKLGGEEIVEYLKGVLSLWIKV 241
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
A0A6A6P1R6_9PEZI (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6P1R6_9PEZI)
HSP 1 Score: 397 bits (1020), Expect = 3.550e-138
Identity = 194/237 (81.86%), Postives = 210/237 (88.61%), Query Frame = 1
Query: 73 KNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
K+KYSV+LPTYNER NLPIITWLL + FTENKLDWEV+IVDDGSPDGTQ +A QL +AYGPSHI L R GKLGLGTAYVHGLQFATG+FV+IMDADFSHHPKFI RMIA QAE DYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKK VL VI STE KGY+FQMEMMVRAKA GY VA VPI+FVDR+YG SKLG EI++Y +GV+ LW+ V
Sbjct: 4 KHKYSVILPTYNERRNLPIITWLLNKTFTENKLDWEVVIVDDGSPDGTQEVALQLQKAYGPSHIVLKPRAGKLGLGTAYVHGLQFATGDFVIIMDADFSHHPKFIARMIAVQAEGDYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKEVLKRVIQSTESKGYTFQMEMMVRAKAMGYKVAGVPITFVDRLYGESKLGGDEIVEYAKGVLGLWLKV 240
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
A0A6A6CLF0_9PEZI (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CLF0_9PEZI)
HSP 1 Score: 397 bits (1019), Expect = 5.230e-138
Identity = 192/237 (81.01%), Postives = 215/237 (90.72%), Query Frame = 1
Query: 73 KNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
KNKYSVLLPTYNER NLPI+ WL+ Q FTE+KLD+EVIIVDDGSPDGTQ IA QLI+AYG S +KL+TR+GKLGLGTAYVHGLQFA+GNFV+IMDADFSHHPKF+P+MIAKQ EA+YDIVTGTRYAG GGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYK AVL +VI+ TE KGYSFQMEMMVRAK G+ VAEVPI+FVDR+YG SKLG EI++Y++GVM LW+ V
Sbjct: 5 KNKYSVLLPTYNERRNLPIMIWLINQTFTEHKLDYEVIIVDDGSPDGTQEIAHQLIKAYGSSKVKLYTRSGKLGLGTAYVHGLQFASGNFVIIMDADFSHHPKFLPQMIAKQKEANYDIVTGTRYAGAGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKNAVLQEVINRTESKGYSFQMEMMVRAKGMGFSVAEVPITFVDRLYGESKLGGEEIVEYLKGVMNLWVKV 241
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
L2FFB7_COLFN (Dolichol-phosphate mannosyltransferase subunit 1 n=28 Tax=Glomerellales TaxID=1028384 RepID=L2FFB7_COLFN)
HSP 1 Score: 396 bits (1017), Expect = 9.470e-138
Identity = 189/239 (79.08%), Postives = 215/239 (89.96%), Query Frame = 1
Query: 67 MAKNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
MA NKYSV+LPTYNER NLPI+ WLL + FTE+KLDWE+IIVDDGSPDGTQT+A+QL++AY P H+ L TR+GKLGLGTAYVHGLQFATGNFV+IMDADFSHHPKFIP+M+A+Q E +YDIVTGTRYAGDGGVYGWDLKRK VSRGANLFADTVLRPGVSDLTGSFRLYK+AVL+ VI STE KGY+FQMEMMVRAKA G VAEVPI+FVDR+YG SKLG EI++Y +GV+ LW+ V
Sbjct: 1 MAANKYSVILPTYNERHNLPIVAWLLNRTFTEHKLDWELIIVDDGSPDGTQTVAEQLVKAYAP-HVVLKTRSGKLGLGTAYVHGLQFATGNFVIIMDADFSHHPKFIPQMVARQKEGNYDIVTGTRYAGDGGVYGWDLKRKFVSRGANLFADTVLRPGVSDLTGSFRLYKRAVLEKVIGSTESKGYTFQMEMMVRAKAMGCSVAEVPITFVDRIYGDSKLGGDEIVEYAKGVLSLWLKV 238
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
M7SVJ5_EUTLA (Dolichol-phosphate mannosyltransferase subunit 1 n=4 Tax=Sordariomycetes TaxID=147550 RepID=M7SVJ5_EUTLA)
HSP 1 Score: 394 bits (1011), Expect = 9.620e-137
Identity = 194/238 (81.51%), Postives = 210/238 (88.24%), Query Frame = 1
Query: 70 AKNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
+K+KYSV+LPTYNER NLPIITWLL + FTE+ LDWE+IIVDDGSPDGTQ +A QL++A+ P H+ L TR+GKLGLGTAYVHGLQFATGNFV+IMDADFSHHPKFIPRMIAKQ A+YDIVTGTRYAGDGGVYGWDLKRK VSRGANLFADTVLRPGVSDLTGSFRLYKKAVL VI STE KGYSFQMEMMVRAKA G VAEVPISFVDRVYG SKLG EI+ Y QGV LW+ V
Sbjct: 8 SKDKYSVILPTYNERRNLPIITWLLNRTFTESNLDWELIIVDDGSPDGTQEVALQLVKAFTP-HVLLKTRSGKLGLGTAYVHGLQFATGNFVIIMDADFSHHPKFIPRMIAKQRTANYDIVTGTRYAGDGGVYGWDLKRKFVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLQKVIESTESKGYSFQMEMMVRAKAMGCSVAEVPISFVDRVYGESKLGGDEIVGYAQGVFNLWLKV 244
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Match:
A0A2K1QFU4_9PEZI (Dolichol-phosphate mannosyltransferase subunit 1 n=4 Tax=Elsinoaceae TaxID=40995 RepID=A0A2K1QFU4_9PEZI)
HSP 1 Score: 393 bits (1010), Expect = 1.180e-136
Identity = 189/237 (79.75%), Postives = 209/237 (88.19%), Query Frame = 1
Query: 73 KNKYSVLLPTYNERENLPIITWLLQQMFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLGTAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYAGDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVIHSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQYVQGVMRLWMSV 783
+NKYS+LLPTYNER+NLPIITWLL + FTEN LDWE+IIVDD SPDGTQT+AKQLI AY PS +KL R GKLGLGTAYVHGLQ+ATGNFV+IMDADFSHHPKFI MI QA+ +YDIVTGTRYAG+GGVYGWDLKRKLVSRGANLFADT+LRPGVSDLTGSFRLYKK VL VI STE KGY+FQMEMMVRAKA G+ VAEVPISFVDRVYG SKLG EI++Y +GV+ LW+ V
Sbjct: 4 RNKYSILLPTYNERKNLPIITWLLNKTFTENNLDWELIIVDDASPDGTQTVAKQLISAYSPSKVKLQPRAGKLGLGTAYVHGLQYATGNFVIIMDADFSHHPKFIAEMIKVQAQGNYDIVTGTRYAGNGGVYGWDLKRKLVSRGANLFADTLLRPGVSDLTGSFRLYKKEVLQKVIKSTESKGYTFQMEMMVRAKAMGFKVAEVPISFVDRVYGESKLGGDEIVEYAKGVLNLWLKV 240
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1021.334.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.41e-150 / Id = 87.34 Expect = 3.76e-148 / Id = 85.71 Expect = 1.12e-141 / Id = 81.51 Expect = 3.46e-140 / Id = 81.17 Expect = 7.78e-140 / Id = 81.01 Expect = 3.55e-138 / Id = 81.86 Expect = 5.23e-138 / Id = 81.01 Expect = 9.47e-138 / Id = 79.08 Expect = 9.62e-137 / Id = 81.51 Expect = 1.18e-136 / Id = 79.75 Sequence UPI000CE2663F A0A6A6Q5T1_9PEZI A0A6H0XKI2_9PEZI A0A4U6XSH6_9PEZI N1PJB9_DOTSN A0A6A6P1R6_9PEZI A0A6A6CLF0_9PEZI L2FFB7_COLFN M7SVJ5_EUTLA A0A2K1QFU4_9PEZI
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Fungi
Seed ortholog score 403.3
Seed ortholog evalue 8.7e-110
Seed eggNOG ortholog 64363.EME41431
Preferred name DPM1
KEGG rclass RC00005
KEGG ko ko:K00721
KEGG Reaction R01009
KEGG Pathway ko00510,ko01100,map00510,map01100
GOs GO:0000030,GO:0003674,GO:0003824,GO:0004582,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006493,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0031984,GO:0034645,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0070085,GO:0071704,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc. Glycosyltransferase family 2 protein
EggNOG OGs 1ZXJ0@147541,38E12@33154,3MHD3@451867,3NUQC@4751,3QRBR@4890,COG0463@1,KOG2978@2759
EC 2.4.1.83
COG Functional cat. M
CAZy GT2
Best tax level Dothideomycetidae
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko01000,ko01003
Hectar predicted targeting category mitochondrion
Exons 2
Model size 787
Cds size 786
Stop 1
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815594.4473963-CDS-P-canaliculata_contig1021:25240..25862 1622815594.4473963-CDS-P-canaliculata_contig1021:25240..25862 Pelvetia canaliculata dioecious CDS P-canaliculata_contig1021 25241..25862 -
1693494155.963376-CDS-P-canaliculata_contig1021:25240..25862 1693494155.963376-CDS-P-canaliculata_contig1021:25240..25862 Pelvetia canaliculata dioecious CDS P-canaliculata_contig1021 25241..25862 -
1622815594.4650369-CDS-P-canaliculata_contig1021:25926..26090 1622815594.4650369-CDS-P-canaliculata_contig1021:25926..26090 Pelvetia canaliculata dioecious CDS P-canaliculata_contig1021 25927..26090 -
1693494155.9766066-CDS-P-canaliculata_contig1021:25926..26090 1693494155.9766066-CDS-P-canaliculata_contig1021:25926..26090 Pelvetia canaliculata dioecious CDS P-canaliculata_contig1021 25927..26090 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1021.334.1
>prot_P-canaliculata_contig1021.334.1 ID=prot_P-canaliculata_contig1021.334.1|Name=mRNA_P-canaliculata_contig1021.334.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=262bp
SFVARRSFRYVYSGGVVPKAARMAKNKYSVLLPTYNERENLPIITWLLQQ MFTENKLDWEVIIVDDGSPDGTQTIAKQLIQAYGPSHIKLHTRTGKLGLG TAYVHGLQFATGNFVVIMDADFSHHPKFIPRMIAKQAEADYDIVTGTRYA GDGGVYGWDLKRKLVSRGANLFADTVLRPGVSDLTGSFRLYKKAVLDDVI HSTEGKGYSFQMEMMVRAKAKGYHVAEVPISFVDRVYGSSKLGSSEILQY VQGVMRLWMSV* back to top mRNA from alignment at P-canaliculata_contig1021:25241..26090-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig1021.334.1 ID=mRNA_P-canaliculata_contig1021.334.1|Name=mRNA_P-canaliculata_contig1021.334.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=850bp|location=Sequence derived from alignment at P-canaliculata_contig1021:25241..26090- (Pelvetia canaliculata dioecious)TCGTTTGTAGCTCGCCGCTCTTTTCGCTACGTATACTCGGGAGGTGTGGT
TCCGAAAGCCGCCAGAATGGCAAAGAACAAGTATTCCGTTCTCCTCCCGA
CGTACAACGAGCGCGAGAACCTCCCCATCATCACATGGCTCCTGCAACAG
ATGTTCACCGAGAA GTACAGACACCTCCCCACCGCCCTTCCGGCGCACGG
GAGTCGCAGTCTGACGTCCGCCCCCTAGCAAACTCGACTGGGAAGTCATC
ATCGTCGACGACGGCTCGCCCGACGGCACGCAGACCATTGCCAAGCAGCT
CATCCAGGCGTACGGACCCAGCCACATCAAGCTTCACACGCGCACGGGCA
AGCTCGGTCTGGGCACCGCGTACGTGCACGGCCTACAGTTCGCGACGGGC
AACTTCGTCGTCATCATGGACGCCGACTTCTCGCACCACCCGAAGTTCAT
CCCCCGCATGATCGCCAAGCAGGCCGAGGCCGACTACGACATTGTGACGG
GCACGCGGTACGCGGGCGACGGCGGCGTGTACGGGTGGGACCTCAAGAGG
AAGCTGGTGTCGCGGGGCGCGAACCTGTTTGCTGACACGGTGTTGCGGCC
CGGCGTGTCGGATTTGACGGGGAGCTTTCGGCTGTATAAGAAGGCGGTGT
TGGACGATGTTATTCACAGCACGGAGGGCAAGGGGTACAGTTTTCAGATG
GAGATGATGGTGAGGGCCAAGGCCAAGGGGTATCACGTTGCAGAGGTGCC
CATCAGTTTCGTCGACCGGGTTTACGGCAGCTCGAAGCTGGGCTCCTCGG
AGATACTTCAATACGTACAGGGGGTGATGCGACTTTGGATGTCGGTTTAG
back to top Coding sequence (CDS) from alignment at P-canaliculata_contig1021:25241..26090-
>mRNA_P-canaliculata_contig1021.334.1 ID=mRNA_P-canaliculata_contig1021.334.1|Name=mRNA_P-canaliculata_contig1021.334.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1572bp|location=Sequence derived from alignment at P-canaliculata_contig1021:25241..26090- (Pelvetia canaliculata dioecious) TCGTTTGTAGCTCGCCGCTCTTTTCGCTACGTATACTCGGGAGGTGTGGT TCCGAAAGCCGCCAGAATGGCAAAGAACAAGTATTCCGTTCTCCTCCCGA CGTACAACGAGCGCGAGAACCTCCCCATCATCACATGGCTCCTGCAACAG ATGTTCACCGAGAATCGTTTGTAGCTCGCCGCTCTTTTCGCTACGTATAC TCGGGAGGTGTGGTTCCGAAAGCCGCCAGAATGGCAAAGAACAAGTATTC CGTTCTCCTCCCGACGTACAACGAGCGCGAGAACCTCCCCATCATCACAT GGCTCCTGCAACAGATGTTCACCGAGAACAAACTCGACTGGGAAGTCATC ATCGTCGACGACGGCTCGCCCGACGGCACGCAGACCATTGCCAAGCAGCT CATCCAGGCGTACGGACCCAGCCACATCAAGCTTCACACGCGCACGGGCA AGCTCGGTCTGGGCACCGCGTACGTGCACGGCCTACAGTTCGCGACGGGC AACTTCGTCGTCATCATGGACGCCGACTTCTCGCACCACCCGAAGTTCAT CCCCCGCATGATCGCCAAGCAGGCCGAGGCCGACTACGACATTGTGACGG GCACGCGGTACGCGGGCGACGGCGGCGTGTACGGGTGGGACCTCAAGAGG AAGCTGGTGTCGCGGGGCGCGAACCTGTTTGCTGACACGGTGTTGCGGCC CGGCGTGTCGGATTTGACGGGGAGCTTTCGGCTGTATAAGAAGGCGGTGT TGGACGATGTTATTCACAGCACGGAGGGCAAGGGGTACAGTTTTCAGATG GAGATGATGGTGAGGGCCAAGGCCAAGGGGTATCACGTTGCAGAGGTGCC CATCAGTTTCGTCGACCGGGTTTACGGCAGCTCGAAGCTGGGCTCCTCGG AGATACTTCAATACGTACAGGGGGTGATGCGACTTTGGATGTCGGTTTAG CAAACTCGACTGGGAAGTCATCATCGTCGACGACGGCTCGCCCGACGGCA CGCAGACCATTGCCAAGCAGCTCATCCAGGCGTACGGACCCAGCCACATC AAGCTTCACACGCGCACGGGCAAGCTCGGTCTGGGCACCGCGTACGTGCA CGGCCTACAGTTCGCGACGGGCAACTTCGTCGTCATCATGGACGCCGACT TCTCGCACCACCCGAAGTTCATCCCCCGCATGATCGCCAAGCAGGCCGAG GCCGACTACGACATTGTGACGGGCACGCGGTACGCGGGCGACGGCGGCGT GTACGGGTGGGACCTCAAGAGGAAGCTGGTGTCGCGGGGCGCGAACCTGT TTGCTGACACGGTGTTGCGGCCCGGCGTGTCGGATTTGACGGGGAGCTTT CGGCTGTATAAGAAGGCGGTGTTGGACGATGTTATTCACAGCACGGAGGG CAAGGGGTACAGTTTTCAGATGGAGATGATGGTGAGGGCCAAGGCCAAGG GGTATCACGTTGCAGAGGTGCCCATCAGTTTCGTCGACCGGGTTTACGGC AGCTCGAAGCTGGGCTCCTCGGAGATACTTCAATACGTACAGGGGGTGAT GCGACTTTGGATGTCGGTTTAG back to top