mRNA_P-canaliculata_contig1021.331.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig1021.331.1
Unique NamemRNA_P-canaliculata_contig1021.331.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: A0A6A6Q6X8_9PEZI (Uncharacterized protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q6X8_9PEZI)

HSP 1 Score: 640 bits (1652), Expect = 3.570e-222
Identity = 340/621 (54.75%), Postives = 438/621 (70.53%), Query Frame = 1
Query:   37 RLLDHLNQVLDDPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN-LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAA-AWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVLSEYQIPDIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHSTPAFPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            RL+ HL  V   P+T LD +L EE  L   + L+ +ER  LIQ L G+L  LQQDP+P + +L+ LLD  +++++L      LP T+GLAVGEHM  +N L++++LEKAT  P DAA VA+MLD M ALVRLWLCT     A +A  LLLDLL+VDQE+QTH  AH+P+GGQGLVWKRIFGDRNIYATLF+ACS  GP T+ +SK Q+TLAQARLM+WLP V +MDWSA+SRSHH DVE AY  +  LL FA +RMVD + DVLM RC+IDFYS+LL + R   A   S    SP+L YLIT  +H +TAAIYLQLPG  +DP+ +  LYGPAANYIATYAS +P+H+LAS M +QV  R+    DLS A WAHA SPK+DLHL ASLP + LLP      AW  +P+SLLPSR++N DVL  LATIF GP R+  +      +   +  D   EAA++RALY HY+ANNP FWR+I+ H D +A KDL+LAAI C+TAVI ANW +     LP+TI   ++G LAIL+PP+L+++LP LL PP T S++ G R D +++ Y  A+AKFDALR +H+++ + V + P  G+E+I  TL KR+ +G + R   + GRI TL+
Sbjct:   10 RLMQHLQSVQASPSTPLDTRLLEEADLILPKTLQGNERLVLIQTLAGLLPELQQDPTPAVNILLHLLDDLSYSDILNFG--SLPYTEGLAVGEHMVSFNRLIISILEKATRKPTDAAHVASMLDTMLALVRLWLCTPDTGIASQASTLLLDLLKVDQEIQTHPDAHLPAGGQGLVWKRIFGDRNIYATLFEACSHTGPSTLKLSKNQRTLAQARLMEWLPAVGAMDWSAISRSHHPDVEAAYGVQEGLLEFAVLRMVDYEDDVLMNRCLIDFYSELLRTTRPPVADA-SIAQESPALLYLITHDVHTRTAAIYLQLPGVRVDPVEAMFLYGPAANYIATYASYFPDHYLASRMARQVNERLMRVFDLSPAKWAHAESPKHDLHLAASLPRKILLPTREGTVAWDQSPLSLLPSRASNDDVLNTLATIFHGPERQIVSFPPSSPLTTANEVDQK-EAASARALYFHYLANNPQFWRNIAIHADTVALKDLALAAIRCLTAVITANWATKTDVALPTTIATSDSGALAILTPPSLEYSLPYLLKPPQTFSNLVGGRGDAESAAYKIASAKFDALRTMHARVATLVKQRPGEGFEDILTTLTKRLNDGPLSREGEVGGRIGTLE 626          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: N1PG61_DOTSN (Uncharacterized protein n=1 Tax=Dothistroma septosporum (strain NZE10 / CBS 128990) TaxID=675120 RepID=N1PG61_DOTSN)

HSP 1 Score: 595 bits (1535), Expect = 1.480e-204
Identity = 323/631 (51.19%), Postives = 437/631 (69.26%), Query Frame = 1
Query:   25 TVCQRLLDHLNQVLDDPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN-LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTS---STSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRR----RTDTVLSEYQIPDIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHSTPAFPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            TV QRL D++N   +DP   LD +LF+E +L  T++L  + R  L+  L+ +L  LQQDP+P + LL+ L+  F+F+E+L+L +  +P T+GLAVGEHM  +N L+L +L KAT N  DAA +A MLD + ALVRLWLCT+      ++ ++LLDLL+VDQ+ + ++ AHVP+GGQGL WKRIFGDR++Y   F+ACS  GP ++ ++K Q+TLAQARLM+WLP VA+MDW+A S+SHH+++E  Y     LL  AA  MVD   DVLM + +I+FYSD+L    R + P      S + S  L YL+T G+HA+TAAIY+QLPG   DPL S  LYGPAA+YIATYAS YP+HFLAS+MP+QV  R+  ALDLS A WAH+  PK+DLHL+ SLP + LL     A W  +P+SLLPS+STNSDVL  LA +F GP      R+ T+L   Q P I+ E     A  +RALY HYVANN  FW DI+ H D +A KD++LAAI+C+TAVI A+W+      LP+T+P P +G+LAILSPPAL++ LP LL PP T ++I G R D ++S+Y  A+AKFDAL+A   +L SQV + P  G+E+I  T+ KR+AEG + R   + G++ T++
Sbjct:    4 TVVQRLNDNINATSNDPAVALDQRLFDEAELVVTQSLPAETRLQLVASLSSLLPKLQQDPTPAVDLLLKLVAPFSFSEVLQLGN--VPFTEGLAVGEHMIAFNRLILALLRKATHNAGDAATLAGMLDTVLALVRLWLCTSDTGITSQSHQVLLDLLKVDQQ-RENSDAHVPTGGQGLFWKRIFGDRDVYRLFFEACSPIGPSSLKLNKSQRTLAQARLMEWLPKVAAMDWNAASKSHHSEIEAEYKVTGGLLDLAASHMVDTKDDVLMHQVLINFYSDIL----RATTPAIQLPGSAADSAGLRYLVTQGIHARTAAIYIQLPGVQFDPLESMFLYGPAAHYIATYASEYPDHFLASQMPKQVLDRLGVALDLSAAKWAHSDPPKHDLHLLTSLPRKALLASAGTAGWRSSPLSLLPSKSTNSDVLNTLAAVFHGPPGDLTFRSGTMLE--QDPAIEEE-----ARQARALYYHYVANNAHFWEDIARHADTVALKDVALAAINCLTAVITAHWNEAETCSLPTTLPTPTSGHLAILSPPALEYALPYLLKPPQTFANIVGGRGDAESSVYKIASAKFDALKAFQVRLASQVDQTPGQGFEDILTTINKRLAEGPLSREGDIGGQVGTIE 620          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: A0A6A6CNH7_9PEZI (Uncharacterized protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CNH7_9PEZI)

HSP 1 Score: 594 bits (1532), Expect = 6.310e-204
Identity = 320/632 (50.63%), Postives = 426/632 (67.41%), Query Frame = 1
Query:   28 VCQRLLDHLNQVLDDPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSF--KGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN---LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVLSEYQIPDIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHSTPAF-----PLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            +  RL  ++      P T LD +LFEE +L     L  +E+  LI  L+ +L  LQQDP+P + LL+ L+   +++++L+L    +P T GLAVGEHM  +N L+L +L KAT N ADAA VA MLD ++ALVRLWLCT     A  A +LLL+LL VDQ ++      +PSGGQGL+WKR+FGDR++Y T+F+ACS   KGP  + +SK Q+TLAQARLM+WLP V +MDW A+ RSHHADVE  +       LL FAA+RMVD   DVLM RC+IDF+SDLL   +       S T+ S +L YLIT GLHA+TAAIY+Q+PG  +DPL S  LYGPAANYIATYAS+YPEHFLAS+MP+QV  R+STAL+LS   WAHA SPK+DLH++ASLP + LL       W  +P+SL+PS++TN D L  LATIF GP    D++            +N  E+  +RALY  Y+++NP+FW DI++H D IA KDL+L+A++ + +VI A W ST        PLP+T+  P +G+LAILSPP+L+ TLP LL PP T +++ G R D +++ Y  A+AKFDAL+A H +L  +V R P  GYEEI  T+ KR+AEG + R   + GR+ TL+
Sbjct:    5 ILTRLTSNIETTTTTPTTPLDTRLFEEAELLLPETLPSEEKSHLITLLSTLLQTLQQDPTPAVNLLLRLVQDHSYSDVLQLG-ANIPFTAGLAVGEHMVAFNRLILALLGKATRNAADAASVAGMLDTVHALVRLWLCTADTGIAASASQLLLELLGVDQTIRRDPDEDLPSGGQGLMWKRVFGDRDVYRTVFEACSLTGKGPGGVELSKSQRTLAQARLMEWLPRVGAMDWGAIERSHHADVEGEFGVEGGGGLLEFAALRMVDVKDDVLMYRCLIDFFSDLLQCTKSNVRIPGSGTTDSAALRYLITQGLHARTAAIYVQIPGVQLDPLESMFLYGPAANYIATYASTYPEHFLASQMPKQVLERLSTALNLSPGKWAHADSPKHDLHVLASLPRKALLTTSGTDDWRSSPLSLVPSKATNPDALNTLATIFHGPP---DSITYNLATSQQQEPENQEESTYARALYYTYLSHNPSFWADITTHADTIALKDLALSALNVLHSVITATWPSTTTTTSQTPPLPTTLATPPSGHLAILSPPSLEHTLPYLLKPPQTFANLVGGRGDVESAAYKIASAKFDALKAFHGRLVDEVQRSPGEGYEEILATVTKRLAEGPLSREGEVGGRVGTLE 632          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: UPI001D7FC242 (uncharacterized protein n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001D7FC242)

HSP 1 Score: 587 bits (1514), Expect = 2.370e-201
Identity = 315/627 (50.24%), Postives = 431/627 (68.74%), Query Frame = 1
Query:   25 TVCQRLLDHLNQVLDDPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN-LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVLSEYQIPDIDREDNTTEAAA-SRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHS--TPAFPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            T+ QRL D++N   +D    LD +LF+E +L  T++L  + R  L+  L+ +L  LQQDP+P + LL+ L++ F+F+ +L+L +  +P T+GLAVGEHM  +N L+L +L KA+ N ADAA +A MLD + ALVRLWLCT       ++ ++LLDLL VDQ+ +  T AHVP+GGQGL WKRIFGDR++Y T F+ACS  GP  + ++K Q+TLAQARLM+WLP VA+MDW+A S+SHH ++E  Y     LL  AA  MVD   DVLM + +I+FYSD+L + + T      S   S  L YL+T G+HA TAAIY+QLPG  +DPL +  LYGPAA+YIATYAS YP+HFLAS+MP+Q   R+  ALDLS A WAH+ SPK+DLHL+ASLP + LL     A W  +P+SLLPS++TN DVL  LA +F GP R  D +        +++E  T E A+ +RALY HY+A+N  FW DI+ H D +A KDL+LAAI+C+TAV+ ANW+   T    LP+T+  P +G+LAILSPPAL++ LP LL PP T ++I G R D ++S Y  AAAKFD+L+A   +L +QV + P  GYE+I  T+ KR+AEG + +   + G++ T++
Sbjct:    4 TIIQRLNDNVNATTNDSAVALDERLFDEAELIVTQSLPAETRLQLVSSLSSLLLNLQQDPTPAVNLLLKLVEPFSFSHVLQLGN--VPFTEGLAVGEHMVAFNRLILALLSKASHNAADAATLAGMLDTVLALVRLWLCTRDTGITNQSHQILLDLLAVDQQ-REDTDAHVPTGGQGLFWKRIFGDRDVYRTFFEACSLTGPSLLKLNKSQRTLAQARLMEWLPKVAAMDWNAASKSHHPEIEAEYKVNGGLLDLAATHMVDTKDDVLMHQVLINFYSDILRATKPT-VRLAGSPGDSAGLRYLVTQGVHAGTAAIYVQLPGVQLDPLEAMFLYGPAAHYIATYASEYPDHFLASQMPKQALDRLGVALDLSAAKWAHSDSPKHDLHLLASLPRKALLATTGTAGWRASPLSLLPSKATNPDVLNTLAAVFHGPAR--DVIFRPGTT--LEQEPTTIEEASQARALYYHYIASNNRFWEDITRHADTVALKDLALAAINCLTAVVTANWNDSETETTTLPTTLATPPSGHLAILSPPALEYALPYLLKPPQTFANIVGGRGDAESSAYKIAAAKFDSLKAFQVRLVTQVEQSPGQGYEDILATINKRLAEGPLSKEGEVGGQVGTME 622          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: F9X626_ZYMTI (Uncharacterized protein n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9X626_ZYMTI)

HSP 1 Score: 579 bits (1493), Expect = 4.190e-198
Identity = 318/627 (50.72%), Postives = 432/627 (68.90%), Query Frame = 1
Query:   37 RLLDHLNQVLDDPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN---LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVL---SEYQIP-DIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANW-HSTPAFPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            RL D++N V  DP+T LD ++FEE++L     L  ++R+ L   L+ +L  LQQDP+PV+ LL+ L+   +++++L+L    +P TDGL  GEHM  +N L++ +L+KAT N ADAA VA MLD + ALVRLWL T+    A ++ KLLLDLL+VDQE+ T+  AH+PSGGQGLVWKRIFGDR++Y T F+ACS  GP ++ +SK Q+TLAQARLM+WLP V +MDWSA+SRSHH+DVE  Y   +   LL FAA+ MVD   DVL+   +I+FYSD+L      S+P++ S + SP L YLI  GLH +TA +YLQLPG  +DP+ +  LYGPAANYIATYA  +P+HFLAS+MP QV TR+ST+ DLS   WAHA SPK+DLHLI+SLP + L+P     ++  +P+SLLP+++TN DVL  LATIF GP +  + V    S    P DI  ++   EA  +R LY +Y+A NP  W DI++  D +A KDL+LAA+   T+VI ANW  ST +  LP+TI  P +G++A+LSPPAL++ LP LL P  + S++ G R D +++ Y  AAAKFDA+     KL  QV   P  GYEEI  T+++R+ EG + R   + GRIAT++
Sbjct:    8 RLADNVNAVTTDPSTPLDKRVFEESELVLVETLSAEQRQSLTVGLSTILPTLQQDPTPVVNLLLRLVRDLSYSDVLQLG--SVPFTDGLVAGEHMVSFNRLIIALLQKATLNAADAASVAGMLDTVLALVRLWLSTSDTGVASQSGKLLLDLLKVDQEILTNPDAHLPSGGQGLVWKRIFGDRDVYRTFFEACSLTGPTSLKLSKSQRTLAQARLMEWLPQVGAMDWSAISRSHHSDVESEYSVESGGGLLDFAALHMVDIKDDVLLHLSLINFYSDILRYSPVPSSPSSISATDSPGLLYLIKHGLHIRTAGLYLQLPGAELDPVDAMFLYGPAANYIATYAEHFPQHFLASQMPPQVLTRLSTSFDLSPGKWAHAESPKHDLHLISSLPRRALVPS-TPTSFPASPLSLLPTKATNPDVLNTLATIFHGPTKP-EIVFGGSSTSATPADITHDE---EANHARTLYYNYLARNPRMWADITTLADTVALKDLALAALHLTTSVITANWSESTNSSALPTTIATPPSGHIALLSPPALEYVLPYLLKPAQSFSNLVGGRGDAESAAYRIAAAKFDAVTLFARKLKEQVDAQPGEGYEEILATVSRRLQEGPLSREAEVGGRIATME 627          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: A0A139HAP4_9PEZI (Uncharacterized protein n=2 Tax=Pseudocercospora TaxID=131324 RepID=A0A139HAP4_9PEZI)

HSP 1 Score: 578 bits (1489), Expect = 1.290e-197
Identity = 318/632 (50.32%), Postives = 423/632 (66.93%), Query Frame = 1
Query:   25 TVCQRLLDHLNQVLDDPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN-LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQR-RTSAPTTSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLP---GGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVL----SEYQIPDIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHSTPAFPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            ++ +R+ D++    +DP+  LD +LFEE +L     L   ++  L+  L+ +L  L+QDP+P   LL+ L+  +++ ++L L++  +P   GL +GEHM  YN L++ +L+KAT N ADAA V  MLD M  LVRLWLCT     A +  +LLLDLL+VDQE+Q    +H+P+GGQGLVWKRIFGDRN+Y   F AC+      + + K  +T+AQARLM+WLP VA+MDW+ VS SHH DVE  + ++  LL FAA+ MVD   DVLM RC+I+FYSDLL + + +   P   ST+ S  L YL+  G+HA+TA IYLQLPG  +DPL S  LYGPAANYIATYAS YPEHF++S+MPQQV  R+  A +LS   WAH  SPK+DLHL+ASLP + LL    GGR +     P+  LPSR+TN DVL  LATIF GP R  D VL    S  Q P I +E     AA +RALY  Y+A+N + WRDI SH D +A KDL+L+AI+ + +V+ ANW +    PLPS I  PE+G+LA+L+PPAL++ LP L+APP T  ++ G R D ++S Y  A+AKFDALRA HS+L  QV R P  GYE+I  T+ KR+AEG + R   + GRI TL+
Sbjct:    4 SLIERVQDNIQASTNDPSVALDQRLFEEAELVLAETLSAAQKSSLVVSLSALLPTLRQDPAPAGNLLLRLIKDYSYADILALAN--VPFESGLLLGEHMTSYNRLIIAILQKATTNAADAASVGGMLDTMKLLVRLWLCTNDTGVATQCSQLLLDLLKVDQEIQDDVDSHIPAGGQGLVWKRIFGDRNVYREFFWACANSHSDLVKLGKGMRTIAQARLMEWLPKVATMDWNVVSHSHHEDVEAEFGSKGGLLGFAALHMVDTSDDVLMYRCLIEFYSDLLDATKPKMHLP--GSTTESHGLKYLVAHGVHAKTAGIYLQLPGAHVDPLESMFLYGPAANYIATYASKYPEHFISSQMPQQVIDRLREAFELSPGKWAHQESPKHDLHLLASLPRKSLLASSGGGRPS-----PLLQLPSRATNPDVLNTLATIFHGPDR--DVVLRPGESAQQDPSIRQE-----AAEARALYFAYLASNQSLWRDIVSHADTVALKDLALSAINVLASVVTANWSTESDIPLPSAIATPESGHLALLAPPALEYALPYLMAPPKTFGTLVGGRGDAESSAYKIASAKFDALRAFHSRLVVQVERSPGEGYEDILATIQKRLAEGPLSREGEVGGRIGTLE 619          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: A0A2D3UV72_9PEZI (Uncharacterized protein n=1 Tax=Ramularia collo-cygni TaxID=112498 RepID=A0A2D3UV72_9PEZI)

HSP 1 Score: 571 bits (1471), Expect = 1.040e-194
Identity = 311/633 (49.13%), Postives = 425/633 (67.14%), Query Frame = 1
Query:   25 TVCQRLLDHLNQVLDDPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDAR---NLLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVLSEYQIP----DIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHS--TPAFPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISS-IAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            ++  RL +++N V  D +T +D ++FEE +L     L  ++R+ L+  L+ +L+ LQQDP+P++ LL+ LL    +  +L L    +P T GLAVG HM  +N L+L +L KAT N ADAA VA M D M ALV+LWLCT     A ++ +LLLDLLRVDQ++ TH  A++P+GGQGLVWKR+FGDR+IY+T FDAC+  GP TI   K  +TLAQARL++WLP V +MDW A+ +SHH DVE +Y       LL FAA+ MVD   DVLM  C++DFYS+LL      S   T+S++ + +L YLI  G+H +TA++YLQLPG  +DP+ S  LYGPAANYIATYAS YP+HFLAS++P Q+ TR+S+A D S   WAHA SPK+DLHL+ASLP + LL    A   S +P+SLLP++STN DVL  LATIF GP    + ++ +   P        E    EA A+R LY  Y+A+NPT W +I++H D IA +DL+LAAI+ + +VI ANW S  + + PLPST+  P +G+LAIL+PPAL++TLP LL PP T S+ + G R D   S Y+ A AKF++L+    +L  QV   P  G+EEI +T+ +R+  G + R   + GRIAT++
Sbjct:    4 SISTRLRENINAVTGDASTPIDARVFEEAELVLADTLSAEQRQALLVDLSALLSTLQQDPTPIVNLLLRLLRDVPYAHMLALG--TVPFTQGLAVGAHMVPFNRLILAILRKATHNAADAASVAGMQDTMLALVKLWLCTDDTGVAGQSSQLLLDLLRVDQQLATHPDAYIPAGGQGLVWKRLFGDRDIYSTFFDACAVHGPSTIKPDKIHRTLAQARLLEWLPTVGAMDWDAICKSHHPDVESSYGLEPEAGLLDFAALHMVDYKDDVLMHVCLVDFYSNLLRISPPPSMRMTASSNETQALLYLICQGVHTRTASLYLQLPGTDLDPVDSMFLYGPAANYIATYASQYPQHFLASQLPSQIFTRLSSAFDKSAGEWAHADSPKHDLHLLASLPRKALLVSSPANXPS-SPLSLLPTKSTNPDVLNTLATIFHGPETP-EILIGKLSSPPNKSQRHEEKQQEEATAARLLYFQYLAHNPTLWLNITNHADTIALQDLALAAINVLHSVITANWTSPSSSSNPLPSTLATPPSGHLAILTPPALEYTLPYLLKPPQTFSNLVGGGRGDVQGSAYLIATAKFESLKVFARRLEGQVQERPGEGFEEILETVKRRVVAGPLSREGEVGGRIATME 632          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: A0A2G5I0R3_CERBT (Uncharacterized protein n=3 Tax=Cercospora TaxID=29002 RepID=A0A2G5I0R3_CERBT)

HSP 1 Score: 551 bits (1420), Expect = 3.890e-187
Identity = 301/625 (48.16%), Postives = 410/625 (65.60%), Query Frame = 1
Query:   40 LLDHLNQVL----DDPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGPLT--ISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN-LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVLSEYQIPDIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHSTPAFPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            +LD LNQ +    +DP   L+ + FEE +L     L ++E   L+  L+ +L  LQQDP+P + LL+ LLD +++ ++L+L    +P  +GLAVG+HM  YN L++++L+KAT N AD A VA MLD + ALV+LWLCT +   A  AQ+LLLDLLR+DQEVQT    HVP+GGQGL+W+R+FGD++IY   F+ACS   P      +SK  +T A  RLM+WL  VA MDWS VSRSHH D+E  Y +   L+ FA   MV+ D D+L+ R +IDFYS +L + +  +A   SS++ S SL YLI +G+HA T AIYLQ  G  +DPL S+ LYGPAANY+ATYAS Y EHFLAS++ +QVK R+   LD S + WAHA SPK+DLHL+ASLP   LL  G    W  +P+SLLPS++TN DVL  LAT+F GP R     L            +  EAA +RALY HYVANNP  W+DI+ H D +A KDL+L+AI+ ++A+  A+W  TP   +P  I  PE+G+LA+++ PAL++  P LL P  + +++ G R D ++S Y  A AK DALR+L  +   QV + P  GYE+I   L+KR+A+G + R   + GRI TL+
Sbjct:    5 ILDKLNQSISATANDPAVPLEQRTFEEAELVLASTLSENENLQLVSSLSSLLPTLQQDPTPAVNLLLRLLDKYSYGDILQLG--SIPFKEGLAVGDHMASYNLLIISILKKATSNAADTASVAGMLDTVMALVQLWLCTRITGVATAAQQLLLDLLRIDQEVQTGPDTHVPTGGQGLMWRRLFGDQDIYRVYFEACSCLTPGNHGFGLSKNHRTEAAGRLMEWLSEVAKMDWSVVSRSHHPDIEREYKSEGGLIGFATSHMVEKD-DILLYRNLIDFYSAILAATKPEAAELGSSSTDSASLHYLIASGVHASTIAIYLQTSGRPVDPLESTFLYGPAANYVATYASLYSEHFLASQLAEQVKARLRVTLDQSPSRWAHAESPKHDLHLLASLPRSALLSTGN---WQSSPLSLLPSKATNPDVLNTLATVFRGPDRDITFKLGSSSGSAAPSARSLEEAAEARALYFHYVANNPRLWQDIAIHADTVALKDLALSAINVLSALSTAHWSVTPEISMPDNIATPESGHLALVAQPALEYAWPYLLRPSRSFANLVGGRGDAESSAYQVAEAKHDALRSLELRFKMQVEQTPGEGYEDILAQLSKRVADGPLDREGEIGGRIGTLE 623          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: A0A1Z5THB7_HORWE (Uncharacterized protein n=19 Tax=Hortaea werneckii TaxID=91943 RepID=A0A1Z5THB7_HORWE)

HSP 1 Score: 548 bits (1413), Expect = 4.740e-186
Identity = 314/636 (49.37%), Postives = 422/636 (66.35%), Query Frame = 1
Query:   28 VCQRLLDHLNQVLDDPNTILDVKLFEETK------LFSTRNLRKDERKPLIQKLTGVLAV---LQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN---LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPT-TSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVLSEYQIPDIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHSTPA-FPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            V +R    L+   +DP      K FEE +      L  T++L  D+R  L+++L G L      Q     ++ LL+ L D +T+ ++ E   Q +P  DGLAVGE M  +N L+L +LEKATG+PADAA  A+ML+ + A+V+LWLCT     A +A +L+ DLL+VD   Q   G     GGQGLVW+R+FGDR++Y+  F++CS    +   MSK  KTLAQARLM+ LP +A+M+W AV+  HH D+E  Y+      LL FAA+ MVD   DVLM RC+IDF+SD++  Q   S  T T +   S  L YLIT GLHA+T+AIYLQLPG++ DP+ S  LYGPAANY+ATYAS+YP HFLA +MP+QV  R+   L+LS   WAH+ SPKNDLHL ASLP + LLP G   +WS +P+SLLPS++TN D L  LATIF GP R+  T++           D+T E AA+RA+Y HY+ANNP FW+DI++H D +A KDL+L+AI C+T+VI A W +T    PLP+TI  PE G+LAILSPPAL++TLP LL PP T +++ G R DP+++ Y+ A+AKFDALRAL+S+L  QV + P  GYEEI  T+ KR+AEG + R  ++ G +  L+
Sbjct:    5 VLRRTFTALDDTQNDPT-----KTFEEAEMVLPHYLTGTQDLI-DQRISLMRRLAGDLTDGRRPQDHALAMVNLLIKLFDGWTWQQVCEFGTQSIPFKDGLAVGEGMVPFNRLMLALLEKATGSPADAAHAASMLETVQAVVKLWLCTGDTGVATQAGQLIQDLLKVDSPAQG-AGDAPTGGGQGLVWRRVFGDRDVYSMFFESCSLSSKVE-GMSKNAKTLAQARLMEVLPRLAAMNWQAVANGHHRDIEAKYEIAQGGGLLDFAALEMVDYKEDVLMHRCLIDFFSDMM--QATASLDTHTMAPHDSLGLQYLITHGLHARTSAIYLQLPGSNPDPIDSMFLYGPAANYLATYASTYPGHFLAGQMPKQVNDRLMHTLELSPGRWAHSDSPKNDLHLAASLPRKALLPEG---SWSSSPVSLLPSKATNPDALHTLATIFHGPERK--TLVFPPPAEGHTDPDSTEEGAAARAIYYHYLANNPRFWQDITTHADTVALKDLALSAIRCITSVITAEWPTTTTDLPLPTTIATPETGHLAILSPPALEYTLPYLLKPPQTFANLVGGRGDPESAAYLIASAKFDALRALNSRLMVQVEQQPGQGYEEILATIGKRLAEGPMSREGQVGGNVGVLE 625          
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Match: A0A2I0S229_9PEZI (Uncharacterized protein n=2 Tax=Cercospora TaxID=29002 RepID=A0A2I0S229_9PEZI)

HSP 1 Score: 540 bits (1391), Expect = 9.270e-183
Identity = 293/625 (46.88%), Postives = 407/625 (65.12%), Query Frame = 1
Query:   40 LLDHLNQVLD----DPNTILDVKLFEETKLFSTRNLRKDERKPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDGLAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTLVRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYATLFDACSFKGP--LTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADVEDAYDARN-LLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTSSTSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIATYASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLPPQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVLSEYQIPDIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLSLAAISCMTAVINANWHSTPAFPLPSTIPVPEAGYLAILSPPALDFTLPCLLAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIGYEEIRDTLAKRIAEGAIRRHIRMPGRIATLD 1893
            +LD LNQ +     DP   L+ + FEE +L     L   E   L+  L+ +L  LQQDP+P + LL+ LLD +++ ++L+L    +P  +GLAVG+ M  YN L++++L+KA  N AD A VA+MLD + ALV+LWLCT     A  AQ+LLLDLLR+D+EVQ+   +HVP+GGQGL+W+R+F D++IY   F+ACS++ P  +   ++K ++T A  RLM+WL  VA MDW+ V+R HH ++E  Y +   L+ FA + MV+ D D+L+ R +IDFYS +L + R  +A   SS+  S SL +LI +G+HA T AIYLQ  G  IDPL  S LYGPAANYIATYAS Y EHFLAS++ +QVK R+   LD S + WAHA SPK+DLHL+ASLP   LL     + W  +P+SLLPSR+TN DVL  LATIF GP R     L            +  EAA +RALY HYVANNP  W+D+++H D +  K L+L+AI+ ++++  ANW +TP  P+P+ I  P +G+LA++  PAL++  P LL P  + +++ G R DP++S Y  A AK DALR+L  +  +QV   P  GYE+I   L KR+AEG + R   + GRI TL+
Sbjct:    5 MLDKLNQSISATASDPAVPLEQRTFEEAELVLAATLSAQENAQLVSSLSALLPTLQQDPTPAVNLLLRLLDRYSYGDILDLG--SIPFKEGLAVGDRMTSYNLLIISILKKAALNAADTASVASMLDTVLALVQLWLCTRHTGVASAAQQLLLDLLRIDREVQSGPDSHVPTGGQGLMWRRLFDDQDIYRVYFEACSYRAPGHVGYGLTKSRRTEAAGRLMEWLAEVAKMDWNVVTRIHHPEIEQEYQSEGGLIGFATLHMVE-DDDILLYRNLIDFYSAILAATRPEAAELGSSSPDSASLRHLIASGVHASTIAIYLQTSGRPIDPLEISFLYGPAANYIATYASKYSEHFLASQLVEQVKNRLRVTLDQSPSKWAHAESPKHDLHLLASLPRSALL---ATSDWQSSPLSLLPSRATNPDVLNTLATIFRGPDREVTFTLGSSSGTAAPSTGSLKEAAEARALYYHYVANNPRLWQDVATHADTVVLKTLALSAINVLSSLSTANWSTTPHIPMPNNIATPNSGHLALVVQPALEYAWPYLLRPSRSFANLVGGRGDPESSAYRVAEAKHDALRSLEIRFKTQVQETPGEGYEDILAQLTKRVAEGPLNREGEIGGRIGTLE 623          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1021.331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A6Q6X8_9PEZI3.570e-22254.75Uncharacterized protein n=1 Tax=Neohortaea acidoph... [more]
N1PG61_DOTSN1.480e-20451.19Uncharacterized protein n=1 Tax=Dothistroma septos... [more]
A0A6A6CNH7_9PEZI6.310e-20450.63Uncharacterized protein n=1 Tax=Zasmidium cellare ... [more]
UPI001D7FC2422.370e-20150.24uncharacterized protein n=1 Tax=Passalora fulva Ta... [more]
F9X626_ZYMTI4.190e-19850.72Uncharacterized protein n=5 Tax=Zymoseptoria TaxID... [more]
A0A139HAP4_9PEZI1.290e-19750.32Uncharacterized protein n=2 Tax=Pseudocercospora T... [more]
A0A2D3UV72_9PEZI1.040e-19449.13Uncharacterized protein n=1 Tax=Ramularia collo-cy... [more]
A0A2G5I0R3_CERBT3.890e-18748.16Uncharacterized protein n=3 Tax=Cercospora TaxID=2... [more]
A0A1Z5THB7_HORWE4.740e-18649.37Uncharacterized protein n=19 Tax=Hortaea werneckii... [more]
A0A2I0S229_9PEZI9.270e-18346.88Uncharacterized protein n=2 Tax=Cercospora TaxID=2... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig1021contigP-canaliculata_contig1021:16731..18629 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score604.0
Seed ortholog evalue8.1e-170
Seed eggNOG ortholog64363.EME41362
EggNOG OGs1ZZG0@147541,2AYQ6@1,2S03U@2759,39YQD@33154,3MHC7@451867,3NYGT@4751,3QT2A@4890
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1899
Cds size1899
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815594.337881-CDS-P-canaliculata_contig1021:16730..186291622815594.337881-CDS-P-canaliculata_contig1021:16730..18629Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1021 16731..18629 +
1693494155.915815-CDS-P-canaliculata_contig1021:16730..186291693494155.915815-CDS-P-canaliculata_contig1021:16730..18629Pelvetia canaliculata dioeciousCDSP-canaliculata_contig1021 16731..18629 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig1021.331.1prot_P-canaliculata_contig1021.331.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig1021 16731..18629 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig1021.331.1

>prot_P-canaliculata_contig1021.331.1 ID=prot_P-canaliculata_contig1021.331.1|Name=mRNA_P-canaliculata_contig1021.331.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=633bp
MATNGHGATVCQRLLDHLNQVLDDPNTILDVKLFEETKLFSTRNLRKDER
KPLIQKLTGVLAVLQQDPSPVLGLLVPLLDVFTFTELLELSHQELPLTDG
LAVGEHMGGYNDLVLTVLEKATGNPADAARVATMLDVMNALVRLWLCTTL
VRTAVRAQKLLLDLLRVDQEVQTHTGAHVPSGGQGLVWKRIFGDRNIYAT
LFDACSFKGPLTISMSKQQKTLAQARLMDWLPVVASMDWSAVSRSHHADV
EDAYDARNLLHFAAIRMVDCDADVLMGRCVIDFYSDLLHSQRRTSAPTTS
STSSSPSLCYLITTGLHAQTAAIYLQLPGNSIDPLASSLLYGPAANYIAT
YASSYPEHFLASEMPQQVKTRISTALDLSLAMWAHATSPKNDLHLIASLP
PQCLLPGGRAAAWSDTPISLLPSRSTNSDVLKALATIFGGPRRRTDTVLS
EYQIPDIDREDNTTEAAASRALYLHYVANNPTFWRDISSHVDAIAFKDLS
LAAISCMTAVINANWHSTPAFPLPSTIPVPEAGYLAILSPPALDFTLPCL
LAPPLTISSIAGARADPDNSLYVTAAAKFDALRALHSKLTSQVLRDPVIG
YEEIRDTLAKRIAEGAIRRHIRMPGRIATLDG*
back to top

mRNA from alignment at P-canaliculata_contig1021:16731..18629+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig1021.331.1 ID=mRNA_P-canaliculata_contig1021.331.1|Name=mRNA_P-canaliculata_contig1021.331.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1899bp|location=Sequence derived from alignment at P-canaliculata_contig1021:16731..18629+ (Pelvetia canaliculata dioecious)
ATGGCAACAAATGGCCATGGTGCCACCGTGTGTCAGCGCCTGCTCGATCA TCTCAATCAGGTCCTAGACGACCCGAACACAATTCTGGACGTCAAGTTGT TCGAAGAAACCAAACTCTTCTCGACCAGAAATCTTCGGAAAGATGAGCGA AAGCCGCTGATTCAGAAGTTGACTGGGGTCCTTGCGGTTCTGCAACAGGA TCCGTCCCCAGTCTTGGGTCTGCTTGTCCCTCTGCTGGATGTATTCACAT TTACCGAGCTCCTTGAACTCAGCCATCAAGAGCTTCCTTTGACCGATGGT CTAGCCGTGGGCGAGCATATGGGTGGCTACAATGACCTTGTGTTGACTGT GTTGGAAAAGGCAACGGGAAATCCCGCCGACGCAGCGCGCGTAGCTACCA TGTTGGACGTCATGAACGCTTTGGTTCGTCTATGGCTCTGTACCACTCTG GTCAGGACTGCGGTGCGAGCCCAAAAGCTGCTGCTGGATCTGTTGAGAGT CGACCAAGAAGTCCAAACGCATACCGGCGCACATGTTCCCAGCGGTGGCC AAGGGCTAGTGTGGAAGCGAATCTTTGGCGATCGCAATATTTACGCGACG TTGTTTGATGCCTGCTCGTTCAAAGGACCTTTGACGATTAGCATGAGCAA GCAGCAGAAGACCTTGGCACAGGCAAGGCTAATGGACTGGCTGCCCGTCG TCGCGTCAATGGACTGGAGCGCCGTGTCGCGAAGCCACCATGCAGACGTG GAAGACGCATATGACGCGCGGAACCTCCTCCACTTCGCGGCAATTCGCAT GGTCGATTGCGACGCCGACGTGTTGATGGGCCGCTGCGTCATCGACTTCT ACTCGGATTTGCTCCATTCGCAGAGACGCACTTCCGCCCCAACGACTTCG TCAACCAGCTCTTCCCCGTCGCTTTGCTACCTGATAACAACCGGTTTGCA CGCGCAGACTGCAGCGATATACTTGCAGCTTCCGGGCAATTCTATAGATC CGCTCGCGTCGAGTTTGCTTTACGGCCCGGCCGCCAACTACATCGCCACT TACGCCTCCAGCTATCCCGAACATTTTCTGGCCAGTGAAATGCCACAGCA GGTTAAAACCCGGATTTCAACGGCCCTTGACTTGTCCCTCGCCATGTGGG CCCATGCAACGTCACCGAAGAACGATCTTCATCTCATCGCCAGCCTGCCG CCTCAATGTCTTCTTCCCGGAGGAAGAGCGGCCGCATGGAGCGATACTCC GATCTCATTGCTACCCTCCCGTTCGACAAACTCCGACGTACTAAAAGCCC TGGCCACGATATTCGGTGGGCCACGCCGGAGAACTGATACGGTCCTATCC GAATACCAAATCCCCGACATCGACCGGGAGGATAACACCACCGAAGCGGC AGCCTCGAGAGCACTGTACCTTCACTATGTCGCCAACAACCCGACTTTCT GGCGTGATATCTCCTCTCACGTAGATGCGATCGCCTTCAAGGATCTCTCA CTCGCTGCAATCAGTTGCATGACAGCCGTCATCAACGCAAATTGGCATTC AACTCCCGCTTTCCCGCTCCCATCGACTATTCCCGTCCCCGAGGCTGGCT ATCTCGCCATTCTGAGCCCACCGGCGCTGGATTTTACGCTCCCGTGTCTA CTGGCTCCTCCTCTGACGATTTCCAGCATTGCGGGAGCGAGAGCAGACCC CGATAATTCGTTATACGTAACCGCAGCCGCCAAGTTTGACGCTCTCCGAG CACTCCATTCAAAGCTCACGTCGCAGGTTTTGCGCGACCCAGTGATTGGG TACGAAGAGATCAGAGATACCCTCGCCAAGCGCATCGCCGAGGGGGCAAT AAGGCGGCATATCCGCATGCCGGGAAGAATTGCTACGCTCGATGGATGA
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig1021:16731..18629+

>mRNA_P-canaliculata_contig1021.331.1 ID=mRNA_P-canaliculata_contig1021.331.1|Name=mRNA_P-canaliculata_contig1021.331.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3798bp|location=Sequence derived from alignment at P-canaliculata_contig1021:16731..18629+ (Pelvetia canaliculata dioecious)
ATGGCAACAAATGGCCATGGTGCCACCGTGTGTCAGCGCCTGCTCGATCA
TCTCAATCAGGTCCTAGACGACCCGAACACAATTCTGGACGTCAAGTTGT
TCGAAGAAACCAAACTCTTCTCGACCAGAAATCTTCGGAAAGATGAGCGA
AAGCCGCTGATTCAGAAGTTGACTGGGGTCCTTGCGGTTCTGCAACAGGA
TCCGTCCCCAGTCTTGGGTCTGCTTGTCCCTCTGCTGGATGTATTCACAT
TTACCGAGCTCCTTGAACTCAGCCATCAAGAGCTTCCTTTGACCGATGGT
CTAGCCGTGGGCGAGCATATGGGTGGCTACAATGACCTTGTGTTGACTGT
GTTGGAAAAGGCAACGGGAAATCCCGCCGACGCAGCGCGCGTAGCTACCA
TGTTGGACGTCATGAACGCTTTGGTTCGTCTATGGCTCTGTACCACTCTG
GTCAGGACTGCGGTGCGAGCCCAAAAGCTGCTGCTGGATCTGTTGAGAGT
CGACCAAGAAGTCCAAACGCATACCGGCGCACATGTTCCCAGCGGTGGCC
AAGGGCTAGTGTGGAAGCGAATCTTTGGCGATCGCAATATTTACGCGACG
TTGTTTGATGCCTGCTCGTTCAAAGGACCTTTGACGATTAGCATGAGCAA
GCAGCAGAAGACCTTGGCACAGGCAAGGCTAATGGACTGGCTGCCCGTCG
TCGCGTCAATGGACTGGAGCGCCGTGTCGCGAAGCCACCATGCAGACGTG
GAAGACGCATATGACGCGCGGAACCTCCTCCACTTCGCGGCAATTCGCAT
GGTCGATTGCGACGCCGACGTGTTGATGGGCCGCTGCGTCATCGACTTCT
ACTCGGATTTGCTCCATTCGCAGAGACGCACTTCCGCCCCAACGACTTCG
TCAACCAGCTCTTCCCCGTCGCTTTGCTACCTGATAACAACCGGTTTGCA
CGCGCAGACTGCAGCGATATACTTGCAGCTTCCGGGCAATTCTATAGATC
CGCTCGCGTCGAGTTTGCTTTACGGCCCGGCCGCCAACTACATCGCCACT
TACGCCTCCAGCTATCCCGAACATTTTCTGGCCAGTGAAATGCCACAGCA
GGTTAAAACCCGGATTTCAACGGCCCTTGACTTGTCCCTCGCCATGTGGG
CCCATGCAACGTCACCGAAGAACGATCTTCATCTCATCGCCAGCCTGCCG
CCTCAATGTCTTCTTCCCGGAGGAAGAGCGGCCGCATGGAGCGATACTCC
GATCTCATTGCTACCCTCCCGTTCGACAAACTCCGACGTACTAAAAGCCC
TGGCCACGATATTCGGTGGGCCACGCCGGAGAACTGATACGGTCCTATCC
GAATACCAAATCCCCGACATCGACCGGGAGGATAACACCACCGAAGCGGC
AGCCTCGAGAGCACTGTACCTTCACTATGTCGCCAACAACCCGACTTTCT
GGCGTGATATCTCCTCTCACGTAGATGCGATCGCCTTCAAGGATCTCTCA
CTCGCTGCAATCAGTTGCATGACAGCCGTCATCAACGCAAATTGGCATTC
AACTCCCGCTTTCCCGCTCCCATCGACTATTCCCGTCCCCGAGGCTGGCT
ATCTCGCCATTCTGAGCCCACCGGCGCTGGATTTTACGCTCCCGTGTCTA
CTGGCTCCTCCTCTGACGATTTCCAGCATTGCGGGAGCGAGAGCAGACCC
CGATAATTCGTTATACGTAACCGCAGCCGCCAAGTTTGACGCTCTCCGAG
CACTCCATTCAAAGCTCACGTCGCAGGTTTTGCGCGACCCAGTGATTGGG
TACGAAGAGATCAGAGATACCCTCGCCAAGCGCATCGCCGAGGGGGCAAT
AAGGCGGCATATCCGCATGCCGGGAAGAATTGCTACGCTCGATGGATGAA
TGGCAACAAATGGCCATGGTGCCACCGTGTGTCAGCGCCTGCTCGATCAT
CTCAATCAGGTCCTAGACGACCCGAACACAATTCTGGACGTCAAGTTGTT
CGAAGAAACCAAACTCTTCTCGACCAGAAATCTTCGGAAAGATGAGCGAA
AGCCGCTGATTCAGAAGTTGACTGGGGTCCTTGCGGTTCTGCAACAGGAT
CCGTCCCCAGTCTTGGGTCTGCTTGTCCCTCTGCTGGATGTATTCACATT
TACCGAGCTCCTTGAACTCAGCCATCAAGAGCTTCCTTTGACCGATGGTC
TAGCCGTGGGCGAGCATATGGGTGGCTACAATGACCTTGTGTTGACTGTG
TTGGAAAAGGCAACGGGAAATCCCGCCGACGCAGCGCGCGTAGCTACCAT
GTTGGACGTCATGAACGCTTTGGTTCGTCTATGGCTCTGTACCACTCTGG
TCAGGACTGCGGTGCGAGCCCAAAAGCTGCTGCTGGATCTGTTGAGAGTC
GACCAAGAAGTCCAAACGCATACCGGCGCACATGTTCCCAGCGGTGGCCA
AGGGCTAGTGTGGAAGCGAATCTTTGGCGATCGCAATATTTACGCGACGT
TGTTTGATGCCTGCTCGTTCAAAGGACCTTTGACGATTAGCATGAGCAAG
CAGCAGAAGACCTTGGCACAGGCAAGGCTAATGGACTGGCTGCCCGTCGT
CGCGTCAATGGACTGGAGCGCCGTGTCGCGAAGCCACCATGCAGACGTGG
AAGACGCATATGACGCGCGGAACCTCCTCCACTTCGCGGCAATTCGCATG
GTCGATTGCGACGCCGACGTGTTGATGGGCCGCTGCGTCATCGACTTCTA
CTCGGATTTGCTCCATTCGCAGAGACGCACTTCCGCCCCAACGACTTCGT
CAACCAGCTCTTCCCCGTCGCTTTGCTACCTGATAACAACCGGTTTGCAC
GCGCAGACTGCAGCGATATACTTGCAGCTTCCGGGCAATTCTATAGATCC
GCTCGCGTCGAGTTTGCTTTACGGCCCGGCCGCCAACTACATCGCCACTT
ACGCCTCCAGCTATCCCGAACATTTTCTGGCCAGTGAAATGCCACAGCAG
GTTAAAACCCGGATTTCAACGGCCCTTGACTTGTCCCTCGCCATGTGGGC
CCATGCAACGTCACCGAAGAACGATCTTCATCTCATCGCCAGCCTGCCGC
CTCAATGTCTTCTTCCCGGAGGAAGAGCGGCCGCATGGAGCGATACTCCG
ATCTCATTGCTACCCTCCCGTTCGACAAACTCCGACGTACTAAAAGCCCT
GGCCACGATATTCGGTGGGCCACGCCGGAGAACTGATACGGTCCTATCCG
AATACCAAATCCCCGACATCGACCGGGAGGATAACACCACCGAAGCGGCA
GCCTCGAGAGCACTGTACCTTCACTATGTCGCCAACAACCCGACTTTCTG
GCGTGATATCTCCTCTCACGTAGATGCGATCGCCTTCAAGGATCTCTCAC
TCGCTGCAATCAGTTGCATGACAGCCGTCATCAACGCAAATTGGCATTCA
ACTCCCGCTTTCCCGCTCCCATCGACTATTCCCGTCCCCGAGGCTGGCTA
TCTCGCCATTCTGAGCCCACCGGCGCTGGATTTTACGCTCCCGTGTCTAC
TGGCTCCTCCTCTGACGATTTCCAGCATTGCGGGAGCGAGAGCAGACCCC
GATAATTCGTTATACGTAACCGCAGCCGCCAAGTTTGACGCTCTCCGAGC
ACTCCATTCAAAGCTCACGTCGCAGGTTTTGCGCGACCCAGTGATTGGGT
ACGAAGAGATCAGAGATACCCTCGCCAAGCGCATCGCCGAGGGGGCAATA
AGGCGGCATATCCGCATGCCGGGAAGAATTGCTACGCTCGATGGATGA
back to top