mRNA_P-canaliculata_contig102074.320.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig102074.320.1
Unique NamemRNA_P-canaliculata_contig102074.320.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: UPI00167A8A99 (7-carboxy-7-deazaguanine synthase n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167A8A99)

HSP 1 Score: 363 bits (932), Expect = 5.930e-126
Identity = 169/217 (77.88%), Postives = 194/217 (89.40%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKYSAFDLASRVAGLWQGGG----ERWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGVP 639
            M Y+VKEIFLTVQGEGVRAGTV+VFLRFAGCNLWSGLERDRA+AVCKFCDTDFVKTDG++GGKY+A +L+ +V  LWQG G    E WVVCTGGEP+LQLD  LI AIH  GFKIAVETNGT+A P+GIDW+CVSPKA+A+LVQ SGDELKLVFPQDEN PSDF +LDF +FCLQPRDDSYLG++KKA H+ AAFQYCL++P+WRLS+QTHK+IGVP
Sbjct:    1 MTYSVKEIFLTVQGEGVRAGTVSVFLRFAGCNLWSGLERDRATAVCKFCDTDFVKTDGLSGGKYTAAELSEKVRSLWQGQGDLVGEPWVVCTGGEPLLQLDQALIKAIHCCGFKIAVETNGTIAAPEGIDWLCVSPKANAELVQTSGDELKLVFPQDENIPSDFTHLDFANFCLQPRDDSYLGAEKKATHTDAAFQYCLENPIWRLSIQTHKTIGVP 217          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: UPI0004236E49 (7-carboxy-7-deazaguanine synthase n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0004236E49)

HSP 1 Score: 313 bits (803), Expect = 2.730e-106
Identity = 151/219 (68.95%), Postives = 173/219 (79.00%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKY-SAFDLASRVAGLWQGGGER-----WVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGVP 639
            M Y+VKEI+LTVQGEG + G  AVFLRFAGCNLWSGL +DRASAVCKFCDTDF+ T+G NGGK+ +A DL +  A  W   GE      WV+CTGGEP+LQLD  LI A HA GFK+AVETNGT+  P G+DWICVSPKA+A+LVQ SG ELKLV+PQDEN P DF +LDF HFCLQPRDDSY+G  KKA H +AAF YCL +P WRLSVQTHK +GVP
Sbjct:    1 MTYSVKEIYLTVQGEGAQTGIAAVFLRFAGCNLWSGLTKDRASAVCKFCDTDFIGTNGPNGGKFKTAADLVTAAAKHWPSIGEAQRGQPWVICTGGEPLLQLDTALIDAFHAVGFKVAVETNGTIKAPTGLDWICVSPKANAELVQTSGHELKLVYPQDENKPEDFAHLDFEHFCLQPRDDSYMGI-KKAAHEKAAFDYCLGNPQWRLSVQTHKYLGVP 218          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: UPI001F3E0AE8 (7-carboxy-7-deazaguanine synthase n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI001F3E0AE8)

HSP 1 Score: 303 bits (775), Expect = 1.060e-101
Identity = 148/214 (69.16%), Postives = 166/214 (77.57%), Query Frame = 1
Query:    7 YAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKYSAFD-LASRVAGLWQG--GGERWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGVP 639
            Y+VKE +LTVQGEG + G  AVFLRFAGCNLWSG E+DRA+AVCKFCDT FV TDG  GG++   D LA  V   W    GGE WVVCTGGEP+LQL A LIAA+H  G KIAVE+NGT+A P+GIDW+ VSPKA A LVQ SGDELKLVFPQ ENHP DF +LDF +F LQPRDDS   S K A H+QAAF+YCL HP W+LSVQTHK IGVP
Sbjct:   27 YSVKETYLTVQGEGAQTGRPAVFLRFAGCNLWSGREKDRATAVCKFCDTQFVGTDGPGGGQFKTPDALAEHVMSFWPKTPGGEPWVVCTGGEPLLQLGAPLIAALHKVGLKIAVESNGTIAAPEGIDWLTVSPKASAPLVQKSGDELKLVFPQVENHPEDFTDLDFKNFYLQPRDDSLTDSSKNAAHAQAAFEYCLRHPQWKLSVQTHKFIGVP 240          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: A0A2G2QZ68_9PROT (7-carboxy-7-deazaguanine synthase n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2QZ68_9PROT)

HSP 1 Score: 296 bits (758), Expect = 1.860e-99
Identity = 139/216 (64.35%), Postives = 165/216 (76.39%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKYSAFD-LASRVAGLWQG---GGERWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGV 636
            M Y+VKEIFL++QGEG   G  +VFLRFAGCNLWSG E+DRASAVCKFCDT+FV  DG+ GG++   + LA  V   W     GGE WV+CTGGEP+LQLD DLI A+H  GFKI VE+NGTL  P+GIDW+C+SPKADA+LVQ SGDELKLV+PQ EN P DF  LDF  F LQPRDDSYL + K   H +A F+YC+ +P WRLS+QTHK +GV
Sbjct:    1 MTYSVKEIFLSIQGEGAHTGRPSVFLRFAGCNLWSGREKDRASAVCKFCDTEFVGMDGLGGGQFKTAEALAXXVXSYWPSNDRGGEPWVICTGGEPLLQLDTDLIEALHKAGFKIGVESNGTLKAPKGIDWLCISPKADAELVQKSGDELKLVYPQPENKPEDFEYLDFNVFSLQPRDDSYLENNKSDAHKRATFEYCIANPKWRLSLQTHKYLGV 216          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: A0A420WJM9_9PROT (7-carboxy-7-deazaguanine synthase n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WJM9_9PROT)

HSP 1 Score: 296 bits (757), Expect = 2.310e-99
Identity = 145/218 (66.51%), Postives = 167/218 (76.61%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKY-SAFDLASRVAGLWQGGGE----RWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGVP 639
            M+YAVKE +LTVQGEG +AG  AVFLRF+GCNLW+G E+DRA AVC+FCDTDF+ TDG  GG++ +A +LA  VA  W    E     WV+CTGGEP LQLD  LI A H  GFK+A+ETNGTL +PQG+DWICVSPKADA LVQ +G ELKLV+PQ EN PSDFV LDF  F LQP DDS     ++A HSQAAF+YCL HP WRLSVQTHK IGVP
Sbjct:    1 MSYAVKECYLTVQGEGAQAGITAVFLRFSGCNLWTGREKDRAKAVCQFCDTDFIGTDGPGGGRFDNAKELARHVASFWPQSDEDKAHAWVICTGGEPALQLDESLIQAFHEAGFKVAIETNGTLKLPQGLDWICVSPKADAPLVQRAGHELKLVYPQIENKPSDFVELDFEVFSLQPLDDS-----EQAAHSQAAFEYCLAHPKWRLSVQTHKYIGVP 213          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: A0A8J3G145_9PROT (7-carboxy-7-deazaguanine synthase n=2 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G145_9PROT)

HSP 1 Score: 290 bits (741), Expect = 6.960e-97
Identity = 141/213 (66.20%), Postives = 165/213 (77.46%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKYSAFDLASRVAGLWQGGGE-RWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGV 636
            M+YAVKE++LTVQGEG +AG VAVFLRFAGCNLWSG E+DRA+AVC FCDTDF+ TDG  GG++ A  LA  V   W  G + RWVVCTGGEP+LQLDA LIAA+ ++GFKIA+ETNGT+  P GIDWICVSPKA+A +VQ SG ELKLV+PQ EN P  FV+LDF +F LQP DD       +  ++ AAFQYCL HP WRLSVQ HK IGV
Sbjct:    8 MSYAVKELYLTVQGEGGQAGRVAVFLRFAGCNLWSGREQDRATAVCSFCDTDFIGTDGPGGGRFDAEGLAEAVLAAWPAGQQDRWVVCTGGEPLLQLDAALIAALKSKGFKIAIETNGTIVAPDGIDWICVSPKANAPVVQRSGQELKLVYPQKENQPDQFVDLDFENFFLQPLDDP-----SRQLNTDAAFQYCLAHPQWRLSVQAHKYIGV 215          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: A3UG96_9PROT (7-carboxy-7-deazaguanine synthase n=3 Tax=Oceanicaulis TaxID=153232 RepID=A3UG96_9PROT)

HSP 1 Score: 288 bits (737), Expect = 2.220e-96
Identity = 140/214 (65.42%), Postives = 163/214 (76.17%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKYSAFD-LASRVAGLWQGGGERWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGVP 639
            M Y+VKE+FLTVQGEG + G  AVFLRFAGCNLWSGLERDRASA+C+FCDTDFV  DG+NGGK+   + LA +VA LW GGGE +VVCTGGEP+LQLDA LI A+H  GF+IAVETNGT+  P+GIDW+CVSPK+ A L Q SGDELKLV+PQ E  P  F  LDF  F LQP D        +  ++QAAF+YCL HP W LS+QTHK I VP
Sbjct:    1 MTYSVKEMFLTVQGEGGQTGRPAVFLRFAGCNLWSGLERDRASAICQFCDTDFVGVDGVNGGKFKTAEALADKVASLWPGGGEPYVVCTGGEPLLQLDAPLIDALHEAGFRIAVETNGTIKAPEGIDWVCVSPKSTAPLKQTSGDELKLVYPQPEAMPELFSGLDFKQFRLQPMD-----GPDQMKNAQAAFEYCLQHPQWMLSLQTHKWINVP 209          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: A0A848V472_9PROT (7-carboxy-7-deazaguanine synthase n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V472_9PROT)

HSP 1 Score: 287 bits (735), Expect = 4.640e-96
Identity = 143/215 (66.51%), Postives = 160/215 (74.42%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKY-SAFDLASRVAGLWQGG-GERWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGVP 639
            M Y+VKEI+LTVQGEG + G  AVFLRFAGCNLWSGLERDRA+AVCKFCDT FV TDG  GGK+ +A +L +     W G  G+RWVV TGGEP+LQLD  LI A H   FKIAVE+NGTLA P GIDW+C+SPKADA LVQ+ G ELKLVFPQ EN P DF +LDF  F LQP DD  L      D+ QAA  YCL HP WRLSVQTHK +GVP
Sbjct:    1 MTYSVKEIYLTVQGEGGQTGLPAVFLRFAGCNLWSGLERDRANAVCKFCDTQFVGTDGPGGGKFKTALELVAACEKYWPGAEGQRWVVLTGGEPLLQLDDQLIEAFHEADFKIAVESNGTLAAPNGIDWLCISPKADAPLVQIRGHELKLVFPQAENSPEDFTHLDFERFSLQPLDDENL-----RDNMQAALNYCLKHPQWRLSVQTHKWLGVP 210          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: A0A7C8LRJ9_9CAUL (7-carboxy-7-deazaguanine synthase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7C8LRJ9_9CAUL)

HSP 1 Score: 286 bits (731), Expect = 1.820e-95
Identity = 139/214 (64.95%), Postives = 165/214 (77.10%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKY-SAFDLASRVAGLWQGGGERWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGVP 639
            M+YAVKE+F T+QGEG++AG  AVFLRFAGCNLWSG E DRA+AVC FCDTDFV  DG  GG++ SA  LA+ VA LW GGG  +VVCTGGEP+LQ+DA LI A+HA+GF+IAVETNGT+A P GIDWICVSPKADA L Q+ GDELKLV+PQ    P+ F  L F HF LQP D+      ++  ++QAA  YCL HP WRLS QTHKS+G+P
Sbjct:    1 MSYAVKELFYTLQGEGMQAGRPAVFLRFAGCNLWSGREEDRATAVCTFCDTDFVGMDGTGGGRFESAEALAAAVAALWPGGGAPYVVCTGGEPLLQIDAPLIEALHARGFEIAVETNGTIAAPDGIDWICVSPKADAALAQMRGDELKLVYPQTGVDPARFEALAFDHFLLQPMDNP-----QRVTNAQAAVAYCLAHPRWRLSTQTHKSLGIP 209          
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Match: A0A550JZV3_9PROT (7-carboxy-7-deazaguanine synthase n=2 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550JZV3_9PROT)

HSP 1 Score: 284 bits (727), Expect = 7.390e-95
Identity = 143/214 (66.82%), Postives = 164/214 (76.64%), Query Frame = 1
Query:    1 MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCDTDFVKTDGINGGKYSAFDLASRVA-GLWQGGGERWVVCTGGEPVLQLDADLIAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVFPQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLWRLSVQTHKSIGVP 639
            M Y+VKE+FLTVQGEG +AG  AVF+RFAGCNLWSGLERDRA+AVC FCDTDFV TDG NGGK+   +  ++ A  LW GGGE   VCTGGEP+LQLDA LIAA+HA GF+IAVETNGTL  P+G+DWICVSPK+ A L Q SG ELKLVFPQ E  P  F +LDF  F LQP D    G  + A+ +QAAF+YCL HP WRLS+QTHK IG P
Sbjct:    1 MTYSVKEMFLTVQGEGGQAGHPAVFIRFAGCNLWSGLERDRAAAVCTFCDTDFVGTDGANGGKFREPEALAKAAFALWPGGGEPLAVCTGGEPLLQLDAPLIAALHAAGFRIAVETNGTLQAPEGLDWICVSPKSTAPLKQTSGHELKLVFPQPEAMPELFEHLDFQEFRLQPMD----GPDQMAN-AQAAFEYCLKHPKWRLSLQTHKWIGAP 209          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102074.320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00167A8A995.930e-12677.887-carboxy-7-deazaguanine synthase n=1 Tax=Litorimo... [more]
UPI0004236E492.730e-10668.957-carboxy-7-deazaguanine synthase n=1 Tax=Hellea b... [more]
UPI001F3E0AE81.060e-10169.167-carboxy-7-deazaguanine synthase n=1 Tax=Robigini... [more]
A0A2G2QZ68_9PROT1.860e-9964.357-carboxy-7-deazaguanine synthase n=1 Tax=Robigini... [more]
A0A420WJM9_9PROT2.310e-9966.517-carboxy-7-deazaguanine synthase n=1 Tax=Litorimo... [more]
A0A8J3G145_9PROT6.960e-9766.207-carboxy-7-deazaguanine synthase n=2 Tax=Algimona... [more]
A3UG96_9PROT2.220e-9665.427-carboxy-7-deazaguanine synthase n=3 Tax=Oceanica... [more]
A0A848V472_9PROT4.640e-9666.517-carboxy-7-deazaguanine synthase n=1 Tax=Hellea s... [more]
A0A7C8LRJ9_9CAUL1.820e-9564.957-carboxy-7-deazaguanine synthase n=2 Tax=Alphapro... [more]
A0A550JZV3_9PROT7.390e-9566.827-carboxy-7-deazaguanine synthase n=2 Tax=Glycocau... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102074contigP-canaliculata_contig102074:38..679 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score316.2
Seed ortholog evalue1.1e-83
Seed eggNOG ortholog1121948.AUAC01000002_gene1390
Preferred namequeE
KEGG rclassRC02989
KEGG koko:K04068,ko:K10026
KEGG ReactionR04710,R10002
KEGG Pathwayko00790,ko01100,map00790,map01100
GOsGO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047
EggNOG free text desc.Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
EggNOG OGs1MUJ2@1224,2TU1S@28211,43WAY@69657,COG0602@1,COG0602@2
EC1.97.1.4,4.3.99.3
COG Functional cat.H
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Exons1
Model size642
Cds size642
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.7227268-CDS-P-canaliculata_contig102074:37..6791622815593.7227268-CDS-P-canaliculata_contig102074:37..679Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102074 38..679 -
1693494155.6355429-CDS-P-canaliculata_contig102074:37..6791693494155.6355429-CDS-P-canaliculata_contig102074:37..679Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102074 38..679 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102074.320.1prot_P-canaliculata_contig102074.320.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig102074 38..679 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig102074.320.1

>prot_P-canaliculata_contig102074.320.1 ID=prot_P-canaliculata_contig102074.320.1|Name=mRNA_P-canaliculata_contig102074.320.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=214bp
MNYAVKEIFLTVQGEGVRAGTVAVFLRFAGCNLWSGLERDRASAVCKFCD
TDFVKTDGINGGKYSAFDLASRVAGLWQGGGERWVVCTGGEPVLQLDADL
IAAIHAQGFKIAVETNGTLAVPQGIDWICVSPKADAKLVQLSGDELKLVF
PQDENHPSDFVNLDFTHFCLQPRDDSYLGSQKKADHSQAAFQYCLDHPLW
RLSVQTHKSIGVP*
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mRNA from alignment at P-canaliculata_contig102074:38..679-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig102074.320.1 ID=mRNA_P-canaliculata_contig102074.320.1|Name=mRNA_P-canaliculata_contig102074.320.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=642bp|location=Sequence derived from alignment at P-canaliculata_contig102074:38..679- (Pelvetia canaliculata dioecious)
ATGAATTACGCCGTTAAAGAAATTTTCCTGACGGTGCAGGGTGAGGGCGT TCGTGCGGGGACGGTGGCTGTTTTTCTGCGCTTCGCCGGATGTAATCTTT GGTCCGGATTAGAACGCGACCGCGCGTCTGCGGTCTGCAAATTCTGCGAT ACTGATTTTGTGAAAACCGACGGGATTAATGGCGGGAAATATTCGGCATT TGACTTGGCTTCGCGAGTGGCCGGCCTTTGGCAAGGCGGCGGCGAGAGAT GGGTGGTTTGCACGGGTGGTGAGCCCGTCTTGCAGTTGGACGCAGACCTC ATTGCGGCCATCCACGCGCAAGGCTTTAAAATCGCAGTTGAAACAAATGG CACCTTGGCTGTGCCGCAGGGAATTGACTGGATTTGTGTCTCTCCCAAGG CAGATGCAAAACTGGTCCAATTGTCAGGAGATGAACTCAAACTCGTTTTC CCGCAAGATGAGAACCACCCATCCGATTTCGTAAATTTGGACTTCACGCA TTTCTGCCTGCAACCCCGCGATGACAGCTATCTTGGATCACAAAAAAAGG CGGACCATTCTCAGGCCGCCTTTCAATATTGCTTAGATCATCCGCTATGG CGTCTGTCGGTGCAGACGCACAAATCGATTGGTGTGCCTTAG
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Coding sequence (CDS) from alignment at P-canaliculata_contig102074:38..679-

>mRNA_P-canaliculata_contig102074.320.1 ID=mRNA_P-canaliculata_contig102074.320.1|Name=mRNA_P-canaliculata_contig102074.320.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1284bp|location=Sequence derived from alignment at P-canaliculata_contig102074:38..679- (Pelvetia canaliculata dioecious)
ATGAATTACGCCGTTAAAGAAATTTTCCTGACGGTGCAGGGTGAGGGCGT
TCGTGCGGGGACGGTGGCTGTTTTTCTGCGCTTCGCCGGATGTAATCTTT
GGTCCGGATTAGAACGCGACCGCGCGTCTGCGGTCTGCAAATTCTGCGAT
ACTGATTTTGTGAAAACCGACGGGATTAATGGCGGGAAATATTCGGCATT
TGACTTGGCTTCGCGAGTGGCCGGCCTTTGGCAAGGCGGCGGCGAGAGAT
GGGTGGTTTGCACGGGTGGTGAGCCCGTCTTGCAGTTGGACGCAGACCTC
ATTGCGGCCATCCACGCGCAAGGCTTTAAAATCGCAGTTGAAACAAATGG
CACCTTGGCTGTGCCGCAGGGAATTGACTGGATTTGTGTCTCTCCCAAGG
CAGATGCAAAACTGGTCCAATTGTCAGGAGATGAACTCAAACTCGTTTTC
CCGCAAGATGAGAACCACCCATCCGATTTCGTAAATTTGGACTTCACGCA
TTTCTGCCTGCAACCCCGCGATGACAGCTATCTTGGATCACAAAAAAAGG
CGGACCATTCTCAGGCCGCCTTTCAATATTGCTTAGATCATCCGCTATGG
CGTCTGTCGGTGCAGACGCACAAATCGATTGGTGTGCCTTAGATGAATTA
CGCCGTTAAAGAAATTTTCCTGACGGTGCAGGGTGAGGGCGTTCGTGCGG
GGACGGTGGCTGTTTTTCTGCGCTTCGCCGGATGTAATCTTTGGTCCGGA
TTAGAACGCGACCGCGCGTCTGCGGTCTGCAAATTCTGCGATACTGATTT
TGTGAAAACCGACGGGATTAATGGCGGGAAATATTCGGCATTTGACTTGG
CTTCGCGAGTGGCCGGCCTTTGGCAAGGCGGCGGCGAGAGATGGGTGGTT
TGCACGGGTGGTGAGCCCGTCTTGCAGTTGGACGCAGACCTCATTGCGGC
CATCCACGCGCAAGGCTTTAAAATCGCAGTTGAAACAAATGGCACCTTGG
CTGTGCCGCAGGGAATTGACTGGATTTGTGTCTCTCCCAAGGCAGATGCA
AAACTGGTCCAATTGTCAGGAGATGAACTCAAACTCGTTTTCCCGCAAGA
TGAGAACCACCCATCCGATTTCGTAAATTTGGACTTCACGCATTTCTGCC
TGCAACCCCGCGATGACAGCTATCTTGGATCACAAAAAAAGGCGGACCAT
TCTCAGGCCGCCTTTCAATATTGCTTAGATCATCCGCTATGGCGTCTGTC
GGTGCAGACGCACAAATCGATTGGTGTGCCTTAG
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