mRNA_P-canaliculata_contig102056.316.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: S3DDX9_GLAL2 (Homeo n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) TaxID=1116229 RepID=S3DDX9_GLAL2) HSP 1 Score: 260 bits (665), Expect = 3.090e-82 Identity = 126/281 (44.84%), Postives = 175/281 (62.28%), Query Frame = 1
Query: 1 LRIVRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQQKWDLKMLSVYSKGKGVSAMV*AAIYDGCKRSELVIMERDPESKRGGYSTNSYIATLEQGLLP----IHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQHDALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
LR VR PK TY + K+ G++ S T ++L+E+ I W A+ RP LT+ A +RLA+ ++ GYT E+W F++SDECSVERG GKA++WVFRTP QKWD +M+ Y K +S MV +D RS+L +++RD +K+ GYS NSYI L + P + EG F QD A IHT+ K WF +H I ++ WPPYSPDLNPIEH+WW LKR + + P + + + + E L WA+I +T + +SMPRR++A + A GW TKY
Sbjct: 87 LRFVRTNPKATYAQVRKEVGLKCSVSTIKKILKENGISNWRARRRPFLTDSVAAKRLAWCLRHRGYTVEEWGLFIWSDECSVERGRGKAQEWVFRTPAQKWDKEMIQTYKANKDLSVMVWGCFWDN-GRSDLYVLDRDFAAKKHGYSANSYIDVLNAQVAPWYEELDDEGYIFMQDNAPIHTAHKVRDWFIEHGIRVIDWPPYSPDLNPIEHIWWVLKRMLIEHYPHLEGASEDNIEE--MQEALKDCWARIPKETFDTLYKSMPRRVEACIKAGGWHTKY 364
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: A0A3E2H4T7_SCYLI (Uncharacterized protein (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2H4T7_SCYLI) HSP 1 Score: 231 bits (589), Expect = 9.060e-71 Identity = 116/277 (41.88%), Postives = 165/277 (59.57%), Query Frame = 1
Query: 10 VRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQQKWDLKMLSVYSKGKGVSAMV*AAIY---DGCKRSELVIMERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQHDALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
VR+EPK++ + K V+IS + R+L+ I W + RP LT+E A +RL + K + + D+ ++F+DECS ER G +W + P+QKWD +M++ YSK K +S MV AAI+ +SELVI++RD ESK+ GY+ NSYI ++ L I G+ F QD IH + K WF D I + WPPYSPDLNPIEH+WWHLK V +++P+ + AL L +AW + D + + LES+ +R AV+AA GW TKY
Sbjct: 90 VRKEPKSSMAKIRKHMEVKISNKAITRILDSVGIWHWRCKRRPYLTDEIAAKRLTWCLKRKDWELSDFLNYIFTDECSAERRAGGITEWAWFQPKQKWDKEMVTTYSKSKDISVMVWAAIWWSNGKVHKSELVILDRDFESKKFGYTANSYIKVIDDQLPKIWEPGLIFMQDNTPIHCANKVKQWFKDMAIPVTDWPPYSPDLNPIEHVWWHLKAKVLEIHPELKDMGKNDEAIIALENALIEAWDLLDDSIIQSCLESLCKRRDAVIAAKGWHTKY 366
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: K2R8D4_MACPH (Transposase-like protein n=1 Tax=Macrophomina phaseolina (strain MS6) TaxID=1126212 RepID=K2R8D4_MACPH) HSP 1 Score: 224 bits (571), Expect = 2.590e-68 Identity = 120/280 (42.86%), Postives = 165/280 (58.93%), Query Frame = 1
Query: 1 LRIVRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQQKWDLKMLSVYSKGKGVSAMV*AAIYDGCKRSELVIMERDPESKRGG--YSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQIT-GPKAQHDALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
LRIVR+EPK TY+ + +Q+GV RT RLL+ K + P L + R R ++SDECS ERG GK R+W FRTP QKW+ M+ Y+KGK VS MV AA RS+L +M RD E+K+GG YSTNSY+ LE+ + + GM QD ASIHT+ K WF + RI +++WP YSPDLNPIEH+W+HLK V ++ P+ ++ G + L + L +AW ++ ++L +M RR +AV+AA+GW KY
Sbjct: 87 LRIVRKEPKITYKEVREQTGVVCHDRTITRLLD---TKPKLPDDTPDLPPKECR-----------------RNIIWSDECSAERGAGKKREWCFRTPGQKWERPMIQTYAKGKDVSVMVWAAFSGKRGRSKLHVMVRDLEAKKGGGGYSTNSYLEVLEKNIPTVWRRGMLVMQDNASIHTAIKVRNWFKEKRITVIRWPAYSPDLNPIEHIWFHLKANVLELYPELNKAPRGKDTIKEKLGKALEEAWEQLPQSLFDSVLGTMKRRCEAVIAAEGWHNKY 346
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: A0A553IEP0_9PEZI (Uncharacterized protein n=1 Tax=Xylaria flabelliformis TaxID=2512241 RepID=A0A553IEP0_9PEZI) HSP 1 Score: 223 bits (567), Expect = 1.930e-67 Identity = 115/282 (40.78%), Postives = 167/282 (59.22%), Query Frame = 1
Query: 1 LRIVRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKY-EGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQQKWDLKMLSVYSKGKG-VSAMV*AAIYDGC---KRSELVIMERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQHDALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
++ VRR+P++TYQ+L +G+ + RT R+L H+++KW A + +L E+ AR RL FARKY + + FSDEC V+ K DWV R +++ +++ S K +S MV I+ +S L++ME DP++ RGG S+ Y+ TLE GLLP + G F QDGA IHT+ K WF H IE++ WPPYSPDLNPIEH W LKR +Y +NP F + +A E++ +AW +IS + +L+S+ R+ AV A GW TK+
Sbjct: 87 VQFVRRQPRSTYQDLRVSTGLNVHDRTFQRVLRRHHLRKWRAAHKIRLDEQKARTRLRFARKYRDPAKLRQLLEAFFSDECIVQTNPDKPSDWVVRFGHERFRKDLVNEESHVKAAISIMVWGMIWQRAGEGHQSPLIVMEGDPKAPRGGVSSRVYLQTLEDGLLPYYEPGDIFMQDGAQIHTANKVKVWFETHGIEVIDWPPYSPDLNPIEHCWHRLKREIYRLNPNFGALQKNEADIATAKEIIQRAWRRISGDLIHRLLDSLKHRLAAVRRARGWYTKF 368
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: A0A364MRN7_9PLEO (X-pro dipeptidyl-peptidase protein n=1 Tax=Stemphylium lycopersici TaxID=183478 RepID=A0A364MRN7_9PLEO) HSP 1 Score: 219 bits (559), Expect = 3.710e-66 Identity = 119/292 (40.75%), Postives = 165/292 (56.51%), Query Frame = 1
Query: 4 RIVRREPKTTYQNLIKQSGVEI----------SKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDW--RQFVFSDECSVERGTGKARDWVFRTPQQKWDLKMLSVYSKGKGVSAMV*AAIY----DGCKRSELVIMERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQHDALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
R R K Y L K+ GV I S+RT R+L+ + + RPKL HA +RL FAR+Y + W R FSDEC V++G+G ++W FR P +KW +M+S + + + MV A+I+ +RS LV+MERD ++ RGGYS SYI L +GLLP + F QDGA IH SR A+ +H I + WPPYSPDLNPIEH+WW LKR +Y PQ++ ++ + + D E L + W I + + ++ SMP+R+ A A GWQTKY
Sbjct: 88 RKARAASKIEYSELAKE-GVVINADRTTSKPPSRRTLYRVLKGDGLINHRFKKRPKLNRGHAVKRLQFARQYRQFA---WGRRTLKFSDECLVQKGSGANQEWCFRFPWEKWKSEMISEHGTSRKPAQMVWASIWLDERGRARRSNLVVMERDSDAPRGGYSAQSYIEALTKGLLPHYRRSQLFMQDGAGIHRSRAVAAFLQEHHINTIAWPPYSPDLNPIEHLWWALKRRMYKHYPQYNNLSQAEEEWDGFCEALKECWRSIPSKLIKRLIMSMPQRLDACRRARGWQTKY 375
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: A0A1E3BGB8_9EURO (Uncharacterized protein n=2 Tax=Aspergillus cristatus TaxID=573508 RepID=A0A1E3BGB8_9EURO) HSP 1 Score: 218 bits (554), Expect = 1.490e-65 Identity = 115/277 (41.52%), Postives = 157/277 (56.68%), Query Frame = 1
Query: 10 VRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQ--QKWDLKMLSVYSKGKGVSAMV*AAIYDGCKRSELVIMERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQ-HDALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
++R+P +++ K + IS RT A +L+E W AQ RP+LTEE A+ R +A + +T E W + ++SDECSVE G GK WV+R +KW K + Y+KGKG+S M+ AAI+ G +E+ M RD ES R GYS+ SY+ +E L I GM F QD A IHT+ WF +H I L+ WPPYSPDLNPIEH W LK +Y + P + G K Q + + AW + + ++ SM R+ AVL A GW T Y
Sbjct: 88 IKRDPFIKTEDICKLLEMPISTRTIACMLKESGYGHWRAQKRPQLTEEIAKLRYEWAYVRKDWTHEQWSKVIWSDECSVELGKGKKNQWVWRLNHFNEKWKKKHIIPYTKGKGISIMIWAAIWGG-SHTEIYQMSRDEESARRGYSSQSYLKLIEDYLPAIWESGMEFMQDNAPIHTANIIKNWFDEHGIPLIDWPPYSPDLNPIEHAWAKLKERIYILYPDLESFNGTKEQLKEQFYMAMEDAWESLGQEYFDGLVRSMENRVNAVLEAKGWYTHY 363
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: A0A2S7PAX9_9HELO (Transposable element tc3 transposase protein n=1 Tax=Rutstroemia sp. NJR-2017a BBW TaxID=2070414 RepID=A0A2S7PAX9_9HELO) HSP 1 Score: 216 bits (549), Expect = 4.150e-65 Identity = 111/275 (40.36%), Postives = 151/275 (54.91%), Query Frame = 1
Query: 10 VRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQQKWDLKMLSVYSKGKGVSAMV*AAIYDGCKRSELVIMERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQH-DALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
+R+ PK T+ + G+++S L + H I W A+ RP+L ++ DECS ERG GK +WVF TP QKWD +++ Y KGK + MV A + KR+ L IM RD ESK+ GYS SY+ L++ +LP + EG+ F QD A IHT++K WF ++ I WPPYSPDLNPIE+ WW LKR + ++ P F +G + L E L AW + D ++ESMPRRIQA + A GW TKY
Sbjct: 90 IRKYPKVTFDQRREDLGLKMSNTYIKNLCKLHGITYWCAKKRPELKQD--------------------------DECSAERGRGKVVEWVFGTPTQKWDPVLVTTYKKGKDIRVMVWGAFWGDGKRTPLFIMNRDFESKKYGYSVESYLEVLDEMVLPYYEEGLIFMQDNAPIHTAKKVKQWFDENGIRTTDWPPYSPDLNPIENAWWVLKRKMMEMFPDFSVSSGSGEEDIKQLEECLKAAWDALDDDFFITLVESMPRRIQACIEAKGWHTKY 338
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: A0A8H4H0Z7_9EURO (Uncharacterized protein n=1 Tax=Aspergillus fumigatiaffinis TaxID=340414 RepID=A0A8H4H0Z7_9EURO) HSP 1 Score: 216 bits (551), Expect = 4.210e-65 Identity = 111/280 (39.64%), Postives = 167/280 (59.64%), Query Frame = 1
Query: 1 LRIVRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQ--QKWDLKMLSVYSKGKGVSAMV*AAIYDGCKRSELVIMERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQ-HDALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
LR +R +P +Y+++ +++GV +S T + L++ W A+ RP+LT E A+ RL +A+ E + E++++ ++SDECS++ G GK + WV+R KW + ++ Y K K VS M+ AI+ G SE+ M RD S R GYS SY+ LE+ L I+ M+F QD A IHT+R +F ++ I + WPPYSPDLNPIEH W LK +Y ++P + G D E++ +AW + + ++ESMPRRIQAV+ A GW TKY
Sbjct: 85 LRAIRTDPFISYKDIREKTGVSVSDTTIRKCLKKSGYGHWRAKKRPQLTTEAAKARLEWAKARENWGVEEFQRIIWSDECSIQLGKGKGQQWVWRLDHLGSKWKKENIAPYVKPKKVSIMIWVAIW-GSGHSEINRMTRDENSCRNGYSAASYLEILEENLFAIYSPEMSFMQDNAPIHTARIIKKFFEENGISTIDWPPYSPDLNPIEHAWAKLKEMIYRLDPDIENYQGSIGDLKDRFNELIERAWEALGQECFDKLIESMPRRIQAVIEAKGWYTKY 363
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: A0A4S3J0Z6_9EURO (Uncharacterized protein n=1 Tax=Aspergillus tanneri TaxID=1220188 RepID=A0A4S3J0Z6_9EURO) HSP 1 Score: 214 bits (545), Expect = 2.830e-64 Identity = 117/278 (42.09%), Postives = 171/278 (61.51%), Query Frame = 1
Query: 4 RIVRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQQKWDLKMLSVYSKGKGVSAMV*AAIYDGCKRSELVIMERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQHD--ALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
R+VRR P +++ L ++ S T R L++++I+KW ++ R L++E AR RL FAR++ + + W ++FSDECSV+R K +VFR + W ++++ GK +S MV +I+ G RS+LV+MERD S R GY+ SYI TLE GL+ + G FQQD A IHT+ WF H I ++KWPP+SPDLNPIEH+W LKR + +++P + G K+Q D E + +AW I + N+++SMPRR+ AV A GW TKY
Sbjct: 85 RLVRRRPDISWKALTVETPGGASISTIRRALKKYHIRKWRSKKRIPLSKEAARARLEFAREW--FKNDTWHTWIFSDECSVQREANKRLKFVFRYQNEGWRDDLVNLCYHGKPISQMVWGSIWRG-GRSKLVVMERDENSPRNGYTARSYIKTLEDGLIEHYKPGTPFQQDNAKIHTAELTQEWFELHGIWVIKWPPHSPDLNPIEHVWNLLKRKLLELHPYL-YLQG-KSQSDWRNFEEAIQEAWWAIPQALIDNLIDSMPRRVMAVYRARGWYTKY 357
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Match: Q1T726_ASPOZ (Transposase n=3 Tax=cellular organisms TaxID=131567 RepID=Q1T726_ASPOZ) HSP 1 Score: 213 bits (542), Expect = 7.960e-64 Identity = 119/277 (42.96%), Postives = 166/277 (59.93%), Query Frame = 1
Query: 7 IVRREPKTTYQNLIKQSGVEISKRTCARLLEEHNIKKWVAQARPKLTEEHARERLAFARKYEGYTAEDWRQFVFSDECSVERGTGKARDWVFRTPQQKWDLKMLSVYSKGKGVSAMV*AAIYDGCKRSELVIMERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAWFADHRIELLKWPPYSPDLNPIEHMWWHLKRAVYDVNPQFDQITGPKAQHD--ALVEVLPQAWAKISDQTLGNILESMPRRIQAVLAADGWQTKY 831
+ RR PK Y+ LI SG IS T R+L +KKW A+ R L + A++RL FAR + T + +FSDECSV+R + + +VFR + + ++++ + GK +S MV AI+ G RS+LV++ERD S RGGYST SY+A LE+GLLPI+ G FQQD A IH S +A W H I + WP +SPDLNPIEH+W LK+ + ++ P+ G ++Q D E + AW I + + ++ SMPRR+QAV A GW TKY
Sbjct: 86 LARRRPKIGYKALIASSGFSISHSTIKRVLRTFQLKKWKAKKRIPLRPDVAKKRLQFARTWANSTYLS--EMMFSDECSVQRKSNNSTQYVFRFSTEAYRKDLVNLTNHGKDISQMVWGAIWIG-GRSQLVVLERDELSPRGGYSTKSYLACLEKGLLPIYKPGSIFQQDNAKIHVSYEAQDWLERHGIWVPDWPAHSPDLNPIEHLWNLLKKKLLELYPEL--FLGGRSQIDWTQFRESIQAAWWAIPQERIDRLIRSMPRRLQAVRLARGWYTKY 357 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102056.316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102056.316.1 >prot_P-canaliculata_contig102056.316.1 ID=prot_P-canaliculata_contig102056.316.1|Name=mRNA_P-canaliculata_contig102056.316.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=144bp MERDPESKRGGYSTNSYIATLEQGLLPIHPEGMTFQQDGASIHTSRKAMAback to top mRNA from alignment at P-canaliculata_contig102056:1..834+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig102056.316.1 ID=mRNA_P-canaliculata_contig102056.316.1|Name=mRNA_P-canaliculata_contig102056.316.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=834bp|location=Sequence derived from alignment at P-canaliculata_contig102056:1..834+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig102056:1..834+ >mRNA_P-canaliculata_contig102056.316.1 ID=mRNA_P-canaliculata_contig102056.316.1|Name=mRNA_P-canaliculata_contig102056.316.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at P-canaliculata_contig102056:1..834+ (Pelvetia canaliculata dioecious)back to top |