mRNA_P-canaliculata_contig102049.315.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A7X0H6H2_9BACT (Stage II sporulation protein D n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H6H2_9BACT) HSP 1 Score: 133 bits (335), Expect = 3.910e-34 Identity = 78/150 (52.00%), Postives = 97/150 (64.67%), Query Frame = 1
Query: 1 WGPIPRNRIALSRRIAAWGRAESRAEHHAVAGLGTLARVQVATYNRVKRPASFRLTDDTGTAFILDAEGFRNACNFPAAGLPPVKRPTRLLSSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMRLY 450
WGPI R+R LS+RI WG+ H+V LGTL V+V+ NRV RPA + L D +G ++ + E FRN+CNF G P+ +LLS+HVDV V V F XXXXXXX SQWGA+AMA AGH YAAIL FYYPGA++ +Y
Sbjct: 324 WGPIVRDRATLSKRIREWGKRHK----HSVQALGTLQSVRVSARNRVGRPAQYLLVDTSGKSYRIGCEFFRNSCNFTRDGEIPLDSKRKLLSAHVDVDVSATQVRFTXXXXXXXXXXXSQWGAQAMAKAGHGYAAILGFYYPGARVTPIY 469
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A2D5Z4Y2_9BACT (SpoIID domain-containing protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5Z4Y2_9BACT) HSP 1 Score: 123 bits (309), Expect = 1.310e-30 Identity = 69/150 (46.00%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 1 WGPIPRNRIALSRRIAAWGRAESRAEHHAVAGLGTLARVQVATYNRVKRPASFRLTDDTGTAFILDAEGFRNACNFPAAGLPPVKRPTRLLSSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMRLY 450
WGP+ R+R AL+RR+A+WGRA H +A L + V+V++ N V R A F + D G F + E FR+ACN+ AG+ + RL SSHV V+V GG V F G G+ Q+GA+AMA AGH AIL FYYPGA + R+Y
Sbjct: 269 WGPVARDRGALARRLASWGRAH----RHDIANLKRIHNVRVSSRNSVGRVAGFVVVGDEGRIFDIGPESFRHACNYAPAGMA-LAADQRLFSSHVRVTVAGGRVHFTDGRGYGHGVGMGQFGAQAMAMAGHTAPAILAFYYPGAAIERVY 413
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A7Y5WA80_9BACT (SpoIID/LytB domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5WA80_9BACT) HSP 1 Score: 102 bits (253), Expect = 1.500e-22 Identity = 57/141 (40.43%), Postives = 81/141 (57.45%), Query Frame = 1
Query: 31 LSRRIAAWGR-AESRAEHHAVAGLGTLARVQVATYNRVKRPASFRLTDDTGTAFILDAEGFRNACNFPAAGLPPVKRPTRLLSSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMRLY 450
LS+RI AWG+ A+S E L L +V+V N RP + LTDD ++L AE FRNACN PA G+PP+ R R+ S ++ V V R G G+ QW A+ MAD+G D++ +L+ +YPGA +++ Y
Sbjct: 320 LSKRIRAWGKMAKSEVET-----LTRLRKVEVRERNAADRPIRYTLTDDRARTYVLTAEEFRNACNHPAPGVPPITRENRINSGDLEAEVWADRVRIR-GRGWGHGVGMCQWCAQGMADSGQDWSTMLRDFYPGATVVKAY 454
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A0T6A3E9_9BACT (Cell division protein, stage II sporulation protein D n=1 Tax=candidate division NC10 bacterium CSP1-5 TaxID=1640516 RepID=A0A0T6A3E9_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 4.850e-10 Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = 1
Query: 97 LGTLARVQVATYNRVKRPASFRLTDDTGTAFILDAEGFRNACNFPAAGLPPVKRPTRLLSSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMRL 447
LG + R++ A R R + R+ DD G +LD +G R + P R+ S+ + GG +IF G GLSQWGAK MAD + Y ILK Y+P A+L RL
Sbjct: 259 LGEIRRIETARRTRSGRVSRLRIWDDAG---VLDIDGKR---------FRQILGPDRIRSTRFTIYPNGGEMIFI-GQGWGHGVGLSQWGAKGMADLAYSYPEILKHYFPLAELRRL 362
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A7M3MDY5_9DELT (SpoIID domain-containing protein n=2 Tax=Oceanidesulfovibrio indonesiensis TaxID=54767 RepID=A0A7M3MDY5_9DELT) HSP 1 Score: 60.5 bits (145), Expect = 7.820e-8 Identity = 38/100 (38.00%), Postives = 52/100 (52.00%), Query Frame = 1
Query: 145 RPASFRLTDDTGTAFILDAEGFRNACNFPAAGLPPVKRPTRLLSSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMR 444
R SF + DTG + C +A L P + P+RL DV +EG V+ G G+SQWGA+AMA+ G Y AIL Y+PGA+L++
Sbjct: 379 RIESFHVRTDTGMQAL--------PCRDVSALLAPERLPSRLC----DVRLEGDEVVLS-GTGYGHGMGMSQWGARAMAEKGRSYVAILNRYFPGAELLQ 465
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A3C1QPV1_9FIRM (Uncharacterized protein (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3C1QPV1_9FIRM) HSP 1 Score: 57.0 bits (136), Expect = 2.140e-7 Identity = 43/125 (34.40%), Postives = 59/125 (47.20%), Query Frame = 1
Query: 94 GLGTLARVQVATYNRVKRPASFRLTDDTGTAFILDAEGFRNACNFPAAGLPPVK----RPTRLLSSH--VDVSVEGG---HVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLM 441
G G L ++ A + R RL G A+I R A A L V+ R T L S+H ++V +G + +G G+SQWGAK MA+AGHDY IL YYP ++L+
Sbjct: 18 GFGELVGLEAAERDERGRVVRLRLVGSQGEAWIDGELNVRRALQ--PASLQRVRDSLGRQTLLPSAHFFLEVQRDGSGKLQAVQVYGGGAGHQLGMSQWGAKGMAEAGHDYLTILNTYYPQSRLI 140
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A1F9FPR9_9DELT (SpoIID domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_44_16 TaxID=1797862 RepID=A0A1F9FPR9_9DELT) HSP 1 Score: 58.2 bits (139), Expect = 4.660e-7 Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 274 SSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMRLY 450
S+ +V +E G +F G G+ QWGAK MA+AGH+Y ILKFYY A+LM+ Y
Sbjct: 325 STWFNVGIENGAAVFA-GRGYGHGVGMCQWGAKGMAEAGHNYRDILKFYYSDAELMKTY 382
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A7Y4R8S7_9BACT (SpoIID/LytB domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y4R8S7_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 4.780e-7 Identity = 40/150 (26.67%), Postives = 64/150 (42.67%), Query Frame = 1
Query: 1 WGPIPRNRIALSRRIAAWGRAESRAEHHAVAGLGTLARVQVATYNRVKRPASFRLTDDTGTAFILDAEGFRNACNFPAAGLPPVKRPTRLLSSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMRLY 450
WGP+ + ++ ++ + A +G + +++ V R + RLT G + + +E FR A ++ S+H V + +F G GL QWG +AMA G D +ILK YYPG L R+Y
Sbjct: 281 WGPVRLSAADIAAKLPSQA-----------AKVGRVDAIEIIDRTPVGRAKTLRLTGSDGRSVTMMSETFRLAVG-----------SMKIRSTHFTVRRDRDGFVFTDGRGFGHASGLCQWGMEAMARRGFDAGSILKHYYPGMHLTRVY 408
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A532DLF6_9BACT (SpoIID/LytB domain-containing protein n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532DLF6_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 8.640e-7 Identity = 40/117 (34.19%), Postives = 54/117 (46.15%), Query Frame = 1
Query: 97 LGTLARVQVATYNRVKRPASFRLTDDTGTAFILDAEGFRNACNFPAAGLPPVKRPTRLLSSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMRL 447
+GT+A Y+R R A R+ G IL E R A + L P S+ D+ G V+ G GL QWGAK +A G+ Y AIL++Y+PG +LM L
Sbjct: 272 VGTIATFAPLAYSRAGRVARLRVLHSEGE-LILRGEDLRKAIGY---SLVP--------STQFDIEAIGREVVLI-GRGAGHGVGLCQWGAKELASLGYPYQAILRYYFPGTELMYL 375
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Match: A0A1Q3RDC7_9FIRM (SpoIID domain-containing protein n=1 Tax=Clostridiales bacterium 38-18 TaxID=1895746 RepID=A0A1Q3RDC7_9FIRM) HSP 1 Score: 57.4 bits (137), Expect = 9.610e-7 Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 268 LLSSHVDVSVEGGHVIFRHGXXXXXXXGLSQWGAKAMADAGHDYAAILKFYYPGAQLMRLY 450
L +S + G+V+F +G G+SQWGAKAMAD G DY AILK+YY +L++L+
Sbjct: 530 LYNSTESFDITDGYVVF-YGHGYGHGLGMSQWGAKAMADLGFDYEAILKYYYKDTELIQLH 589 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102049.315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102049.315.1 >prot_P-canaliculata_contig102049.315.1 ID=prot_P-canaliculata_contig102049.315.1|Name=mRNA_P-canaliculata_contig102049.315.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=151bp WGPIPRNRIALSRRIAAWGRAESRAEHHAVAGLGTLARVQVATYNRVKRPback to top mRNA from alignment at P-canaliculata_contig102049:547..999- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig102049.315.1 ID=mRNA_P-canaliculata_contig102049.315.1|Name=mRNA_P-canaliculata_contig102049.315.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=453bp|location=Sequence derived from alignment at P-canaliculata_contig102049:547..999- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig102049:547..999- >mRNA_P-canaliculata_contig102049.315.1 ID=mRNA_P-canaliculata_contig102049.315.1|Name=mRNA_P-canaliculata_contig102049.315.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=906bp|location=Sequence derived from alignment at P-canaliculata_contig102049:547..999- (Pelvetia canaliculata dioecious)back to top |