Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 521 |
| Cds size | 519 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815593.3439429-CDS-P-canaliculata_contig102017:2..521 | 1622815593.3439429-CDS-P-canaliculata_contig102017:2..521 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig102017 3..521 + |
| 1693494155.5225475-CDS-P-canaliculata_contig102017:2..521 | 1693494155.5225475-CDS-P-canaliculata_contig102017:2..521 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig102017 3..521 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102017.311.1 >prot_P-canaliculata_contig102017.311.1 ID=prot_P-canaliculata_contig102017.311.1|Name=mRNA_P-canaliculata_contig102017.311.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=173bp
SRTHGNSSDGSHNSHLHGNSSSGGNPPDPGLAGRDHLPNSRTRGPPGSGH
PLNSSTVAGGPTRGDIIGEAISRTGSGPCVGGAVRRSISPRTAGQKRLHP
CDSIIRMRRHPFQEPTPRSATLPPLPPGHHTTATRLPLRCHRRPDLSAQP
RELHLPSAPPSESDWNFSSGQSR back to topmRNA from alignment at P-canaliculata_contig102017:3..522+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig102017.311.1 ID=mRNA_P-canaliculata_contig102017.311.1|Name=mRNA_P-canaliculata_contig102017.311.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=520bp|location=Sequence derived from alignment at P-canaliculata_contig102017:3..522+ (Pelvetia canaliculata dioecious)
AGTCGCACGCATGGCAACAGCAGCGACGGCAGCCACAACAGTCACCTGCA
TGGCAACAGCAGCAGCGGTGGGAACCCCCCGGACCCTGGTCTAGCTGGGA
GAGACCACCTCCCCAACAGCAGAACACGTGGGCCGCCTGGGAGCGGCCAC
CCCCTCAACAGCAGTACCGTAGCGGGAGGTCCCACCCGCGGAGACATCAT
CGGGGAGGCGATCAGCCGCACTGGCAGCGGGCCCTGTGTCGGTGGTGCGG
TGAGGAGGAGCATTTCCCCGCGAACTGCAGGACAGAAGCGTCTGCACCCG
TGCGACAGCATCATCCGAATGCGGCGTCATCCTTTTCAGGAGCCTACGCC
GCGCAGCGCGACACTTCCTCCCCTCCCTCCTGGACATCACACGACAGCTA
CGCGTCTGCCCCTCCGATGCCATCGCCGCCCGGATCTGTCGGCCCAACCA
CGCGAACTCCACCTCCCATCGGCGCCCCCCTCGGAATCTGATTGGAACTT
CTCCTCCGGGCAATCCCGAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig102017:3..522+ >mRNA_P-canaliculata_contig102017.311.1 ID=mRNA_P-canaliculata_contig102017.311.1|Name=mRNA_P-canaliculata_contig102017.311.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1038bp|location=Sequence derived from alignment at P-canaliculata_contig102017:3..522+ (Pelvetia canaliculata dioecious)
AGTCGCACGCATGGCAACAGCAGCGACGGCAGCCACAACAGTCACCTGCA
TGGCAACAGCAGCAGCGGTGGGAACCCCCCGGACCCTGGTCTAGCTGGGA
GAGACCACCTCCCCAACAGCAGAACACGTGGGCCGCCTGGGAGCGGCCAC
CCCCTCAACAGCAGTACCGTAGCGGGAGGTCCCACCCGCGGAGACATCAT
CGGGGAGGCGATCAGCCGCACTGGCAGCGGGCCCTGTGTCGGTGGTGCGG
TGAGGAGGAGCATTTCCCCGCGAACTGCAGGACAGAAGCGTCTGCACCCG
TGCGACAGCATCATCCGAATGCGGCGTCATCCTTTTCAGGAGCCTACGCC
GCGCAGCGCGACACTTCCTCCCCTCCCTCCTGGACATCACACGACAGCTA
CGCGTCTGCCCCTCCGATGCCATCGCCGCCCGGATCTGTCGGCCCAACCA
CGCGAACTCCACCTCCCATCGGCGCCCCCCTCGGAATCTGATTGGAACTT
CTCCTCCGGGCAATCCCGAAGTCGCACGCATGGCAACAGCAGCGACGGCA
GCCACAACAGTCACCTGCATGGCAACAGCAGCAGCGGTGGGAACCCCCCG
GACCCTGGTCTAGCTGGGAGAGACCACCTCCCCAACAGCAGAACACGTGG
GCCGCCTGGGAGCGGCCACCCCCTCAACAGCAGTACCGTAGCGGGAGGTC
CCACCCGCGGAGACATCATCGGGGAGGCGATCAGCCGCACTGGCAGCGGG
CCCTGTGTCGGTGGTGCGGTGAGGAGGAGCATTTCCCCGCGAACTGCAGG
ACAGAAGCGTCTGCACCCGTGCGACAGCATCATCCGAATGCGGCGTCATC
CTTTTCAGGAGCCTACGCCGCGCAGCGCGACACTTCCTCCCCTCCCTCCT
GGACATCACACGACAGCTACGCGTCTGCCCCTCCGATGCCATCGCCGCCC
GGATCTGTCGGCCCAACCACGCGAACTCCACCTCCCATCGGCGCCCCCCT
CGGAATCTGATTGGAACTTCTCCTCCGGGCAATCCCGA back to top
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