mRNA_P-canaliculata_contig102.297.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: A0A4U0UMR6_9PEZI (Uncharacterized protein n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0UMR6_9PEZI) HSP 1 Score: 134 bits (338), Expect = 1.140e-37 Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNKDPVALRSADETLENCYTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVRIKHRYLL+NILYPD K +A + YT+QFRRPS D+++ LL+R++RD V +LFGDYGSGK+A SLQVKY SSATSTAIIRV+REHYR+VW
Sbjct: 1 MVRIKHRYLLVNILYPDAKYSPLRPAATAGDDVPYTVQFRRPSPDQMNGGLLMRLIRDGVVELFGDYGSGKIAGSLQVKYFSSATSTAIIRVSREHYRLVW 101
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: A0A6A6CC76_9PEZI (Uncharacterized protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CC76_9PEZI) HSP 1 Score: 133 bits (335), Expect = 2.180e-37 Identity = 66/101 (65.35%), Postives = 81/101 (80.20%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNKDPVALRSADETLENCYTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVRIKHRYLL++ILYP +A S+ + EN +T+QFRRPS DR+D +LL R++RD V++LFGDYG+G VA SLQVKY S ATSTAI+RVAR HYRMVW
Sbjct: 1 MVRIKHRYLLLDILYPSEDKSIA--SSKKNGENPWTVQFRRPSSDRLDGKLLARLIRDGVSELFGDYGAGMVAGSLQVKYISPATSTAIVRVARAHYRMVW 99
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: A0A4V5NF63_9PEZI (Uncharacterized protein n=2 Tax=Friedmanniomyces simplex TaxID=329884 RepID=A0A4V5NF63_9PEZI) HSP 1 Score: 133 bits (334), Expect = 4.590e-37 Identity = 68/102 (66.67%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNKDPVALRSADETLENC-YTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVRIKHRYLL+NILYPD K LR A + ++ YT+QFRRPS D+V+ LL+R++RD V +LFGDYGSGK+A SLQVKY S ATSTA IRV+REHYR+VW
Sbjct: 1 MVRIKHRYLLVNILYPDTKSS-HLRPASKPGDDVPYTVQFRRPSPDQVNGGLLMRLIRDGVVELFGDYGSGKIAGSLQVKYFSPATSTATIRVSREHYRLVW 101
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: A0A6A6Q801_9PEZI (Rpp14/Pop5 family-domain-containing protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q801_9PEZI) HSP 1 Score: 132 bits (332), Expect = 8.000e-37 Identity = 67/104 (64.42%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNKDPVA---LRSADETLENCYTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVRIKHRYLL+NILYPD+ + R AD+ YT+QFRRP+ DR+D++LL R+VRD V++LFGDYGSG +A SLQ+KY S ATSTAIIRV+R+HYRMVW
Sbjct: 1 MVRIKHRYLLVNILYPDSNNVANGSWKRPADDVP---YTVQFRRPTPDRMDSKLLARLVRDGVSELFGDYGSGMIAGSLQIKYFSPATSTAIIRVSRDHYRMVW 101
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: A0A3M7E2H6_HORWE (Ribonuclease P/MRP protein subunit POP5 n=15 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7E2H6_HORWE) HSP 1 Score: 130 bits (328), Expect = 3.050e-36 Identity = 64/103 (62.14%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNKDPVALRSADETLENC--YTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVR+KHRYLL+NILYPD K + +R A ET + Y++QFR+PS +++ ++LLR++RD VA+LFGDYGSGKVA +LQ+KY S ATSTAIIRV+R+HYR+VW
Sbjct: 1 MVRLKHRYLLVNILYPDPKT-INVRIATETADQNAPYSLQFRQPSSQQLNIKILLRIIRDGVAELFGDYGSGKVAGTLQIKYFSPATSTAIIRVSRDHYRLVW 102
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: UPI001D8759E7 (Ribonuclease P/MRP protein subunit POP5 n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001D8759E7) HSP 1 Score: 128 bits (322), Expect = 2.750e-35 Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNKDPVALRSADETLENCYTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVRIKHRYLL+NILYP + ++++ YT+QFRRPS D +DA+LL R++RD VA+LFGDYG+G A SLQVKY SSATSTAI+RVAR HYRMVW
Sbjct: 1 MVRIKHRYLLLNILYPSLDKANTPATQNDSIP--YTVQFRRPSSDYLDAKLLGRMIRDGVAELFGDYGAGTTAGSLQVKYVSSATSTAIVRVARAHYRMVW 99
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: F9XJR2_ZYMTI (Uncharacterized protein n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9XJR2_ZYMTI) HSP 1 Score: 127 bits (319), Expect = 7.400e-35 Identity = 62/101 (61.39%), Postives = 76/101 (75.25%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNKDPVALRSADETLENCYTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVR+KHRYLL+NILY + P + +T+QFRRP D++D +LL RVVRD VA+LFGDYG+G VA SLQVKY SSAT+TAIIRV+R HYR+VW
Sbjct: 1 MVRLKHRYLLVNILYTEPAKPARPAKTAAEAQLPWTVQFRRPGQDKMDGKLLARVVRDGVAELFGDYGAGMVAGSLQVKYMSSATNTAIIRVSRAHYRLVW 101
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: UPI000CE17622 (ribonuclease P/MRP protein subunit POP5-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE17622) HSP 1 Score: 127 bits (319), Expect = 9.740e-35 Identity = 65/102 (63.73%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNK-DPVALRSADETLENCYTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVRIKHRYLL+NILYPD K PV SA + E Y++QFR+PS D+++ + L RV++D VA LFGDYGSGK+ASSL +KY S ATST IIRV+R+HYR+VW
Sbjct: 1 MVRIKHRYLLVNILYPDEKKSPVNSASAAKD-EIPYSVQFRQPSSDQLNPKFLARVIKDGVASLFGDYGSGKIASSLLIKYFSPATSTMIIRVSRDHYRLVW 101
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: UPI000CE1D794 (ribonuclease P/MRP protein subunit POP5-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1D794) HSP 1 Score: 127 bits (318), Expect = 1.240e-34 Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNK-DPVA--LRSADETLENCYTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVRIKHRYLL+NILYPD K PV L + D+ Y++QFR+PS D+V+ +L+ +V++D VADLFGDYGSGK+ASSL +KY S ATST IIRV+R+HYR+VW
Sbjct: 1 MVRIKHRYLLVNILYPDGKASPVTSVLATKDDVP---YSVQFRQPSSDQVNPKLISKVIKDGVADLFGDYGSGKIASSLFIKYFSPATSTMIIRVSRDHYRLVW 101
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Match: A0A6A6F854_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Cercospora zeae-maydis SCOH1-5 TaxID=717836 RepID=A0A6A6F854_9PEZI) HSP 1 Score: 125 bits (314), Expect = 1.240e-34 Identity = 61/102 (59.80%), Postives = 84/102 (82.35%), Query Frame = 1 Query: 34 MVRIKHRYLLINILYPDNKDPVALRSADETLENC-YTIQFRRPSDDRVDARLLLRVVRDCVADLFGDYGSGKVASSLQVKYCSSATSTAIIRVAREHYRMVW 336
MVRIKHRYLL+NILYP N++ RSA ++ ++ + +QFRRPS D+ + L +++++ V++LFGDYG+GK+A SLQ+KYCSSATSTAI+RVAREHYR+VW
Sbjct: 1 MVRIKHRYLLLNILYP-NEEKRNPRSASKSEDDLPWAVQFRRPSSDQFNGGTLHKMIKNGVSELFGDYGAGKIAGSLQIKYCSSATSTAIVRVAREHYRLVW 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102.297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102.297.1 >prot_P-canaliculata_contig102.297.1 ID=prot_P-canaliculata_contig102.297.1|Name=mRNA_P-canaliculata_contig102.297.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=112bp QSDNAHSFPLTMVRIKHRYLLINILYPDNKDPVALRSADETLENCYTIQFback to top mRNA from alignment at P-canaliculata_contig102:17197..17588- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig102.297.1 ID=mRNA_P-canaliculata_contig102.297.1|Name=mRNA_P-canaliculata_contig102.297.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=392bp|location=Sequence derived from alignment at P-canaliculata_contig102:17197..17588- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig102:17197..17588- >mRNA_P-canaliculata_contig102.297.1 ID=mRNA_P-canaliculata_contig102.297.1|Name=mRNA_P-canaliculata_contig102.297.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=672bp|location=Sequence derived from alignment at P-canaliculata_contig102:17197..17588- (Pelvetia canaliculata dioecious)back to top |