mRNA_P-canaliculata_contig10190.279.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: A0A3M7FKA0_HORWE (Uncharacterized protein n=1 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7FKA0_HORWE) HSP 1 Score: 167 bits (423), Expect = 3.600e-50 Identity = 83/124 (66.94%), Postives = 96/124 (77.42%), Query Frame = 3 Query: 132 EPKPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALTG 503 E K NT K+ QPVGPYSQA IAG I+VSGQ+PAT G++VEGSI D T ACCE +K +LE GSS+S+ VKV V+LT+M NF MN VY YF HKP+RS VAVKELPKGVPVEIE +ALTG Sbjct: 4 EIKTFNTPKSAQPVGPYSQAVIAGPHIFVSGQIPATAEGKLVEGSIADKTTACCEGLKNILEDAGSSISRCVKVTVFLTTMDNFAEMNSVYEKYFTHKPSRSCVAVKELPKGVPVEIEAMALTG 127
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: A0A3M7AFD9_HORWE (Uncharacterized protein n=16 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7AFD9_HORWE) HSP 1 Score: 170 bits (430), Expect = 3.780e-50 Identity = 93/167 (55.69%), Postives = 116/167 (69.46%), Query Frame = 3 Query: 9 RTTTTTTSTRQLILAFAGKSRPI--KRIPPLPSRVIRSSIHTMEPKPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALTG 503 RT ++TS + I A+ + + K+ P +R + + I T NT K+ QPVGPYSQA IAG I+VSGQ+PAT G++VEGSI D T ACCE IK +LE GSS+S+ VKV V+LT+M+NF MN VY YF HKP+RS VAVKELPKGVPVEIE +ALTG Sbjct: 46 RTLQSSTSISRTISAYPTTTSTLFYKQSKPTLTRTMATEIKTF-----NTPKSAQPVGPYSQAVIAGPHIFVSGQIPATAEGKLVEGSIADKTTACCEGIKNILEDAGSSISRCVKVTVFLTTMENFAEMNSVYEKYFTHKPSRSCVAVKELPKGVPVEIEAMALTG 207
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: A0A0D1YIV5_9PEZI (Uncharacterized protein n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D1YIV5_9PEZI) HSP 1 Score: 164 bits (415), Expect = 6.280e-49 Identity = 81/120 (67.50%), Postives = 90/120 (75.00%), Query Frame = 3 Query: 144 VNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALTG 503 V+T+KA PYSQA IAG TIYVSGQ+P TP G++VEGSIGD T CCENIK +L GSS+ +IVKVNV+L M NF MNE Y YF HKPARS VAVK LP GVPVEIECIAL G Sbjct: 7 VHTDKAFPVAAPYSQAIIAGGTIYVSGQIPGTPDGKLVEGSIGDKTAQCCENIKAILAEAGSSIERIVKVNVFLDDMANFKEMNETYAKYFTHKPARSCVAVKALPLGVPVEIECIALPG 126
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: A0A6A6PMN9_9PEZI (Endoribonuclease L-PSP/chorismate mutase-like protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PMN9_9PEZI) HSP 1 Score: 164 bits (415), Expect = 2.070e-48 Identity = 85/139 (61.15%), Postives = 103/139 (74.10%), Query Frame = 3 Query: 90 PLPSRVIRSSIHTMEP-KPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALTG 503 PLP +S TM K NT+ A QPVGPYSQA IAG I+VSGQ+PA SG++VEGSI D T+A CE++K +LE GSS+ +++K V+LTSM +F MN VY YF HKP+RS VAVKELPKGVPVEIECIAL+G Sbjct: 33 PLP----QSQTRTMSDLKTFNTKNAAQPVGPYSQAMIAGPHIFVSGQIPADASGKLVEGSIADKTKASCESVKAILEAAGSSIDRVIKTTVFLTSMGDFAEMNGVYEKYFAHKPSRSCVAVKELPKGVPVEIECIALSG 167
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: M2LXY0_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2LXY0_BAUPA) HSP 1 Score: 162 bits (411), Expect = 2.310e-48 Identity = 81/121 (66.94%), Postives = 94/121 (77.69%), Query Frame = 3 Query: 138 KPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALT 500 K VNT+K+ QPVGPYSQA IAG I+VSGQ+PA +G + +GSI D T+ACCE +K +LE GSSLS IVKV V+LT M NF MN VY YF H+PARS VAVKELPKGVPVEIE IAL+ Sbjct: 5 KVVNTKKSMQPVGPYSQAIIAGPHIFVSGQIPADAAGNLTQGSIADKTKACCEGLKNILEEAGSSLSSIVKVTVFLTDMANFGEMNSVYEQYFTHRPARSCVAVKELPKGVPVEIEAIALS 125
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: A0A4U0VKD6_9PEZI (Uncharacterized protein n=2 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0VKD6_9PEZI) HSP 1 Score: 160 bits (406), Expect = 1.210e-47 Identity = 77/121 (63.64%), Postives = 95/121 (78.51%), Query Frame = 3 Query: 138 KPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALT 500 K V ++KAT PVGPYSQA AG I+VSGQ+PA G++++GSI D T+ACCE +K +LE GSS++K+VK V++T+M NF MN VY YF HKPARS VAVKELPKGVPVEIECIAL+ Sbjct: 5 KIVYSKKATPPVGPYSQAIQAGPHIFVSGQIPADAEGKLIQGSIADKTKACCEGVKNILEEAGSSIAKVVKTTVFITTMDNFAEMNSVYEQYFTHKPARSCVAVKELPKGVPVEIECIALS 125
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: A0A8H3VV22_VENIN (Uncharacterized protein n=2 Tax=Venturia inaequalis TaxID=5025 RepID=A0A8H3VV22_VENIN) HSP 1 Score: 163 bits (412), Expect = 2.380e-47 Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 3 Query: 75 IKRIPPLPSR----------VIRSSIHTMEPKPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALTG*TGL 515 I+R+ P P R ++ + + E + ++T+KA PYSQA +AG TIYVSGQ+P + G++VEG+IGD T ACC+NI +LE GSS+ ++VKVN++L M +F MNE YG YF HKPARS VAVK LP GVPVEIECIALTG + L Sbjct: 59 IRRVEPSPYREILKKDIAFKTVKVNSNMTEMQKIHTDKAFPVAAPYSQAIVAGGTIYVSGQIPGSADGKLVEGNIGDKTAACCKNIIAILEAAGSSIERVVKVNIFLDDMAHFKEMNETYGVYFAHKPARSCVAVKALPLGVPVEIECIALTGKSNL 215
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: A0A517L3X5_9PEZI (Uncharacterized protein n=1 Tax=Venturia effusa TaxID=50376 RepID=A0A517L3X5_9PEZI) HSP 1 Score: 162 bits (411), Expect = 2.650e-47 Identity = 79/128 (61.72%), Postives = 95/128 (74.22%), Query Frame = 3 Query: 132 EPKPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALTG*TGL 515 E + ++TEKA PYSQA +AG TIYVSGQ+P G++VEG+IGD T ACC+NI +LE GSS+ ++VKVN++L M NF MNE YG YF HKPARS VAVK LP GVPVEIECIALTG + L Sbjct: 80 EMQKIHTEKAFPVAAPYSQAVVAGGTIYVSGQIPGGADGKLVEGNIGDKTAACCKNIIAILEAAGSSIERVVKVNIFLDDMANFKEMNETYGEYFAHKPARSCVAVKALPLGVPVEIECIALTGKSNL 207
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: M3B1T0_PSEFD (Uncharacterized protein n=2 Tax=Pseudocercospora TaxID=131324 RepID=M3B1T0_PSEFD) HSP 1 Score: 159 bits (402), Expect = 5.040e-47 Identity = 77/119 (64.71%), Postives = 91/119 (76.47%), Query Frame = 3 Query: 144 VNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYF-VHKPARSTVAVKELPKGVPVEIECIAL 497 ++T KA QPV PYSQA AG ++VSGQ+PA P G +VEGSI D T CCE +K +LE GSS+SK+ KV V++TSM+NF MN VY YF HKPARS VAVKELPKGVPVE+ECIAL Sbjct: 7 ISTPKAAQPVAPYSQAIKAGGLVFVSGQIPAAPDGSLVEGSIADKTTVCCEGLKNILEAAGSSISKVTKVTVFITSMENFAEMNSVYEKYFGQHKPARSCVAVKELPKGVPVELECIAL 125
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Match: A0A6A5JZ58_9PLEO (YjgF-like protein n=3 Tax=Pleosporaceae TaxID=28556 RepID=A0A6A5JZ58_9PLEO) HSP 1 Score: 159 bits (402), Expect = 5.900e-47 Identity = 76/122 (62.30%), Postives = 91/122 (74.59%), Query Frame = 3 Query: 138 KPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMTRACCENIKFVLEGCGSSLSKIVKVNVYLTSMQNFPAMNEVYGTYFVHKPARSTVAVKELPKGVPVEIECIALTG 503 K + T+ A P GPY+QA IAG I+VSGQ+PA SG ++EGSI D T+ CCENIK +L G ++ ++VKVNV+L M NF MN VY TYF HKPARS VAVK+LPKGVPVEIECIA TG Sbjct: 5 KKIETKNACPPAGPYTQAIIAGPNIFVSGQIPADTSGNLIEGSIADKTKMCCENIKGILGEAGVAMDRVVKVNVFLDDMANFTEMNGVYETYFAHKPARSCVAVKQLPKGVPVEIECIAYTG 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10190.279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10190.279.1 >prot_P-canaliculata_contig10190.279.1 ID=prot_P-canaliculata_contig10190.279.1|Name=mRNA_P-canaliculata_contig10190.279.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=126bp MEPKPVNTEKATQPVGPYSQACIAGSTIYVSGQLPATPSGEIVEGSIGDMback to top mRNA from alignment at P-canaliculata_contig10190:8819..9704- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10190.279.1 ID=mRNA_P-canaliculata_contig10190.279.1|Name=mRNA_P-canaliculata_contig10190.279.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=886bp|location=Sequence derived from alignment at P-canaliculata_contig10190:8819..9704- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10190:8819..9704- >mRNA_P-canaliculata_contig10190.279.1 ID=mRNA_P-canaliculata_contig10190.279.1|Name=mRNA_P-canaliculata_contig10190.279.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=756bp|location=Sequence derived from alignment at P-canaliculata_contig10190:8819..9704- (Pelvetia canaliculata dioecious)back to top |