Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 334 |
| Cds size | 309 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815590.9159153-UTR-P-canaliculata_contig10190:8091..8114 | 1622815590.9159153-UTR-P-canaliculata_contig10190:8091..8114 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10190 8092..8114 + |
| 1693494154.2787766-UTR-P-canaliculata_contig10190:8091..8114 | 1693494154.2787766-UTR-P-canaliculata_contig10190:8091..8114 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10190 8092..8114 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815590.9334195-CDS-P-canaliculata_contig10190:8114..8423 | 1622815590.9334195-CDS-P-canaliculata_contig10190:8114..8423 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10190 8115..8423 + |
| 1693494154.288066-CDS-P-canaliculata_contig10190:8114..8423 | 1693494154.288066-CDS-P-canaliculata_contig10190:8114..8423 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10190 8115..8423 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10190.278.1 >prot_P-canaliculata_contig10190.278.1 ID=prot_P-canaliculata_contig10190.278.1|Name=mRNA_P-canaliculata_contig10190.278.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=103bp
MESGTGQTGASRADDANAASKRKHWPSSGPLEGRSAGRKHNKSDEELPHR
MTTATSSSTKDQGGASDKAAAPLLPPCSTNHKLLHPNRRPSQSRPRKAES
IAP back to topmRNA from alignment at P-canaliculata_contig10190:8092..8423+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10190.278.1 ID=mRNA_P-canaliculata_contig10190.278.1|Name=mRNA_P-canaliculata_contig10190.278.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=332bp|location=Sequence derived from alignment at P-canaliculata_contig10190:8092..8423+ (Pelvetia canaliculata dioecious)
GTTCCGGTTTGGGATGTGGGAAAATGGAGTCTGGTACTGGTCAAACGGGA
GCTTCTCGAGCCGACGATGCGAACGCCGCGAGTAAGCGCAAGCATTGGCC
TTCCTCGGGCCCGCTGGAAGGTCGGTCAGCAGGTCGAAAGCATAACAAAT
CAGACGAAGAACTACCACATCGTATGACCACAGCTACATCCTCGAGTACC
AAAGACCAAGGCGGCGCAAGCGACAAAGCCGCCGCGCCACTCCTGCCTCC
TTGCAGCACTAACCACAAGTTGCTACATCCCAACCGACGGCCAAGCCAAT
CCAGGCCCAGAAAGGCCGAATCCATCGCCCCC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10190:8092..8423+ >mRNA_P-canaliculata_contig10190.278.1 ID=mRNA_P-canaliculata_contig10190.278.1|Name=mRNA_P-canaliculata_contig10190.278.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=618bp|location=Sequence derived from alignment at P-canaliculata_contig10190:8092..8423+ (Pelvetia canaliculata dioecious)
ATGGAGTCTGGTACTGGTCAAACGGGAGCTTCTCGAGCCGACGATGCGAA
CGCCGCGAGTAAGCGCAAGCATTGGCCTTCCTCGGGCCCGCTGGAAGGTC
GGTCAGCAGGTCGAAAGCATAACAAATCAGACGAAGAACTACCACATCGT
ATGACCACAGCTACATCCTCGAGTACCAAAGACCAAGGCGGCGCAAGCGA
CAAAGCCGCCGCGCCACTCCTGCCTCCTTGCAGCACTAACCACAAGTTGC
TACATCCCAACCGACGGCCAAGCCAATCCAGGCCCAGAAAGGCCGAATCC
ATCGCCCCCATGGAGTCTGGTACTGGTCAAACGGGAGCTTCTCGAGCCGA
CGATGCGAACGCCGCGAGTAAGCGCAAGCATTGGCCTTCCTCGGGCCCGC
TGGAAGGTCGGTCAGCAGGTCGAAAGCATAACAAATCAGACGAAGAACTA
CCACATCGTATGACCACAGCTACATCCTCGAGTACCAAAGACCAAGGCGG
CGCAAGCGACAAAGCCGCCGCGCCACTCCTGCCTCCTTGCAGCACTAACC
ACAAGTTGCTACATCCCAACCGACGGCCAAGCCAATCCAGGCCCAGAAAG
GCCGAATCCATCGCCCCC back to top
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