mRNA_P-canaliculata_contig10180.268.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: A0A835YV88_9STRA (Flavoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV88_9STRA) HSP 1 Score: 214 bits (546), Expect = 2.310e-63 Identity = 100/156 (64.10%), Postives = 122/156 (78.21%), Query Frame = 1 Query: 4 VKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILKELGVVVIPPASKLLACGDRGIGALAAVDDI 471
VK++VT+AS+ F+D +R Y+ +Y A++AL+PP+ VL D EWG W VGDPV H+QLR+WAD++L+APLSANTLGKLANGLCDNLLTC+ARAWD KP +VAPAMNTHMW HP+T RH++ L LGV I P K LACGD G GALA V DI
Sbjct: 42 VKIIVTKASRAFLDCARDYDRPSYDAWSALEPPMEVLADEGEWGMWSKVGDPVQHVQLREWADLLLIAPLSANTLGKLANGLCDNLLTCVARAWDVT--KPLIVAPAMNTHMWSHPLTARHLASLGVLGVTTISPVVKTLACGDTGTGALADVADI 195
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: A0A4D9D302_9STRA (Flavoprotein domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D302_9STRA) HSP 1 Score: 211 bits (536), Expect = 9.670e-62 Identity = 96/164 (58.54%), Postives = 131/164 (79.88%), Query Frame = 1 Query: 1 QVKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILK-ELGVVVIPPASKLLACGDRGIGALAAVDDICNVAKD 489
+VKV +T+A++HF + +++YNP A+A++ L + VL+D EW AW+A+GDPVLHIQLRDWAD++L+APLSANTLGKLA+GLCDNL+T I RAWD + +KP ++APAMNTHMW+HP T + + +L+ +L VIPP SKLLACGDRG G LAA++D+ +D
Sbjct: 41 EVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWNAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDVK-RKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIEDLVRAVQD 203
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: A0A067CM62_SAPPC (Flavoprotein domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CM62_SAPPC) HSP 1 Score: 199 bits (506), Expect = 1.120e-57 Identity = 92/158 (58.23%), Postives = 122/158 (77.22%), Query Frame = 1 Query: 1 QVKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILKE-LGVVVIPPASKLLACGDRGIGALAAVDDI 471
+V+VV+T+++ F+ ++ YNP +AA+ AL+ + + D EW AW+ +GDP+LHIQLRDWADV +VAPLSAN++ KLANGLCDNLLTC+ARAW KP +VAPAMNT MW HP T +H++IL++ G VIPP SK+LACG+ G GALAA+DDI
Sbjct: 34 EVQVVLTKSANFFLPKAAAYNPTMFAAFEALN--VTIHRDEDEWNAWNVIGDPILHIQLRDWADVCVVAPLSANSMAKLANGLCDNLLTCVARAWS--QSKPLLVAPAMNTQMWAHPCTGKHVTILQDDFGYRVIPPVSKMLACGETGNGALAAIDDI 187
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: W4GS25_9STRA (Flavoprotein domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GS25_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.230e-53 Identity = 90/156 (57.69%), Postives = 118/156 (75.64%), Query Frame = 1 Query: 4 VKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILKELGVVVIPPASKLLACGDRGIGALAAVDDI 471
V+VVVT+A++ F+D++ Y+P+A+AA+ AL PI L D EW AW ++GDPVLHI LRDWADV+ +APLSANT+ KLA GLCDNL+TC+ARAW KP +VAPAMNT M+ HP T+ H+ +L+ G ++ P SK LACG+ G GALA+VD I
Sbjct: 164 VRVVVTKAAQFFLDKAATYDPEAHAAFIALSLPI--LRDDDEWNAWSSLGDPVLHIHLRDWADVMCIAPLSANTMAKLAGGLCDNLVTCVARAWS--TAKPLIVAPAMNTQMYAHPATESHLHLLRSFGYSIVSPVSKTLACGEVGNGALASVDTI 315
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: A0A024TQ70_9STRA (Flavoprotein domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQ70_9STRA) HSP 1 Score: 192 bits (489), Expect = 3.240e-53 Identity = 92/156 (58.97%), Postives = 118/156 (75.64%), Query Frame = 1 Query: 4 VKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILKELGVVVIPPASKLLACGDRGIGALAAVDDI 471
V+++VT+A+ F+D + Y+P A+AA+ AL PI L D EW AW ++GDPVLHIQLRDWADV+ +APLSANT+ KLA+GLCDNLLTC+ARAW KP +VAPAMNT M+QH +T +++L+ G V+PP SK LACG+ G GALAAVD I
Sbjct: 163 VRILVTKAATFFLDMAAAYDPVAHAAFDALALPI--LHDDDEWSAWSSLGDPVLHIQLRDWADVLCIAPLSANTMAKLAHGLCDNLLTCVARAWS--PTKPVIVAPAMNTQMYQHRVTSSQLALLRSFGYTVVPPVSKTLACGEVGNGALAAVDTI 314
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: A0A1V9ZY52_9STRA (Phosphopantothenoylcysteine decarboxylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY52_9STRA) HSP 1 Score: 187 bits (474), Expect = 8.220e-53 Identity = 87/163 (53.37%), Postives = 121/163 (74.23%), Query Frame = 1 Query: 4 VKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILK-ELGVVVIPPASKLLACGDRGIGALAAVDDICNVAKD 489
V++V+T+++ F++++ YNP+ YAA+ L I LDD EW W+A+GD +LHIQLR+WA+V +VAPLSANT+ KL NG+CDNLLTC+ARAW + KP ++APAMNT MW HP T + + IL+ + G +IPP SK+LACG+ G GALAAV IC + ++
Sbjct: 40 VQIVLTKSANFFLEKAEKYNPEVYAAFQTLGVKI-YLDD-NEWDTWNAIGDDILHIQLREWAEVFVVAPLSANTMAKLTNGICDNLLTCVARAW--ASSKPLLIAPAMNTQMWNHPCTKKQLQILENDYGYEIIPPMSKMLACGETGNGALAAVKTICTLVQN 198
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: A0A0G4I9D1_9ALVE (Flavoprotein domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I9D1_9ALVE) HSP 1 Score: 186 bits (471), Expect = 1.510e-52 Identity = 92/157 (58.60%), Postives = 106/157 (67.52%), Query Frame = 1 Query: 1 QVKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILKELGVVVIPPASKLLACGDRGIGALAAVDDI 471
+++VV T SKHF D TAL + D EWG W GDPV+HI LR WADV +VAPLSANTL KLANGL DNLLTC+ARAWD Q KPF+V PAMNT MW+H T RHI+ + ELG VV+PP SK LACGD G+GAL VDD+
Sbjct: 38 EIRVVFTSKSKHFCDP------------TALPSNVQSFTDEDEWGHWKQKGDPVVHIDLRRWADVFVVAPLSANTLAKLANGLSDNLLTCVARAWDVQ--KPFIVFPAMNTLMWEHAFTSRHIATIVELGTVVVPPVSKELACGDTGVGALPPVDDV 180
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: K3WBB5_GLOUD (Flavoprotein domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBB5_GLOUD) HSP 1 Score: 183 bits (465), Expect = 1.340e-51 Identity = 87/147 (59.18%), Postives = 107/147 (72.79%), Query Frame = 1 Query: 1 QVKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILKELGVVVIPPASKLLACGDRG 441
+VK+VVT+A F+ + YNP A+ A+TA PI V+ D EW AW VGD VLHI+L+DWADV+L+AP+SANTL K+ANGL DNLLTCIARAW+ +K FV APAMNT MW HP+T RH+ L E G +IPP K+LACG G
Sbjct: 39 EVKLVVTKAGDFFLQKVSEYNPSAWGAFTARAEPIEVIRDEHEWDAWRVVGDSVLHIELKDWADVLLLAPMSANTLAKIANGLSDNLLTCIARAWNV--RKSFVYAPAMNTDMWDHPVTARHLRTLGEFGYEMIPPVEKMLACGVVG 183
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: F0YJ52_AURAN (Flavoprotein domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ52_AURAN) HSP 1 Score: 189 bits (480), Expect = 2.480e-51 Identity = 92/156 (58.97%), Postives = 116/156 (74.36%), Query Frame = 1 Query: 4 VKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILKELGVVVIPPASKLLACGDRGIGALAAVDDI 471
V+VVVTE +K F+ ++ Y+ A+A + A I VL DA EW AW +GD V+H++LR WAD++++APLSAN+L KLANGLCD+LL+C ARAWDF KPFVVAPAMNT MW HP+T H++ L+ LGV +PPASK LACGD G GALA V I
Sbjct: 237 VRVVVTEKAKTFLAKAEAYDAAAWATFQASG--IEVLSDADEWDAWQEIGDDVVHVELRKWADLLVIAPLSANSLAKLANGLCDDLLSCTARAWDFD--KPFVVAPAMNTAMWTHPLTATHLADLRVLGVAAVPPASKKLACGDVGPGALADVPAI 388
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Match: A0A1V9YYZ2_9STRA (Phosphopantothenoylcysteine decarboxylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYZ2_9STRA) HSP 1 Score: 182 bits (462), Expect = 5.890e-51 Identity = 91/172 (52.91%), Postives = 121/172 (70.35%), Query Frame = 1 Query: 1 QVKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVGDPVLHIQLRDWADVILVAPLSANTLGKLANGLCDNLLTCIARAWDFQNKKPFVVAPAMNTHMWQHPMTDRHISILK-ELGVVVIPPASKLLACGDRGI--------------GALAAVDDI 471
+V++V+T+A+ F++++ YNP +AAY AL+ I + D EW +W+A+GDP+LHIQLRDWADV +VAPLSAN++ KLANGL DNLLTC+ARAW + KP +VAPAMNT MW HP TD+H+ +L+ E +I P SK+LACG+ G GALA VDDI
Sbjct: 38 EVQLVLTKAAAFFLEKAASYNPSMFAAYEALN--ITIHRDEDEWSSWNAIGDPILHIQLRDWADVFVVAPLSANSMAKLANGLSDNLLTCVARAWS--SAKPLLVAPAMNTQMWLHPCTDKHLRVLEGEYVYRIIRPVSKMLACGETGARTSCWLRITTFVGYGALAHVDDI 205 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10180.268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10180.268.1 >prot_P-canaliculata_contig10180.268.1 ID=prot_P-canaliculata_contig10180.268.1|Name=mRNA_P-canaliculata_contig10180.268.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=172bp QVKVVVTEASKHFIDRSRIYNPQAYAAYTALDPPIAVLDDAQEWGAWDAVback to top mRNA from alignment at P-canaliculata_contig10180:5245..8378- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10180.268.1 ID=mRNA_P-canaliculata_contig10180.268.1|Name=mRNA_P-canaliculata_contig10180.268.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=3134bp|location=Sequence derived from alignment at P-canaliculata_contig10180:5245..8378- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10180:5245..8378- >mRNA_P-canaliculata_contig10180.268.1 ID=mRNA_P-canaliculata_contig10180.268.1|Name=mRNA_P-canaliculata_contig10180.268.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at P-canaliculata_contig10180:5245..8378- (Pelvetia canaliculata dioecious)back to top |