mRNA_P-canaliculata_contig10166.258.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10166.258.1

>prot_P-canaliculata_contig10166.258.1 ID=prot_P-canaliculata_contig10166.258.1|Name=mRNA_P-canaliculata_contig10166.258.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=339bp
MAAFVRYVAIKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRT
FHEAAGRAGGQIEARRPPMRLSYYGGGHYDSVSPIDDRAPLGEESQASAS
TPEPGVLEESALERSRRRKAEAGSGRWDPEEMKLRQEDESPSEQNIMDYA
LAWSRNVFETQFDDIESALVASVDHMEESHLSSLKAASRDSELVVLQEEM
LLTAQAQSEEEQLRKALEASRCTAAAAAAEAEMVSQAIAESMALTSGGLT
EKAGMVEGKPSPGADGQDNQVLGAAAAGTAAAGEDEDEDFKRALLLSGMV
EEWEAPPEGVGTGQDFDLDELQEDPELKFAIDASLAGD*
back to top

mRNA from alignment at P-canaliculata_contig10166:2791..6982-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10166.258.1 ID=mRNA_P-canaliculata_contig10166.258.1|Name=mRNA_P-canaliculata_contig10166.258.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=4192bp|location=Sequence derived from alignment at P-canaliculata_contig10166:2791..6982- (Pelvetia canaliculata dioecious)
CGTCATGCTGTGTTCAGACGCGTCCACACAGGAAGCACAGCACCGACGTC GCGAGCTATGTTTTCGTGAGATTTTGGCACCATTTTCCAGAATCTGCAAT GCGCAATGCTGTTCACTGTCTTGAGTACGACGGTACCTAGCCTTGTTTGG TTACGTTTGCCGAGGAAATCGAGCATGGGCAGCCTCTGTGGCAGCACTAA CCTTGTCACCCACGCTGCCACACGTGTTGTTGATAATATTGGCGGTGGAA TAGAATGAGCGAGTCGAAGCACGTAAGCGAAGCGACATCAATGCGCATCG TCACGCTTCGTGAAGAGCACACAAGATAAATTGCGCGAGGGGTTGTCCGT CAAGCTCACACTCCCCATCCCATCAATTTCCATCAATTCCCCCTGCCGTA TCTGCCCTTCCCCCTGCCGTATTTTTGCGAAACCTCATTACGCGTAAGAG CGAGGCCCACTTCTTCGAGCCATACGTAGAAGGTGACATGGCCGCGTTCG TGAGATACGTGGCCATCAAGCGCCAGAACGCGGTCTGGGGGGACGACCCG GAGGTCCAAGCGCTGTGCGAAATCTACGATAGACCGGCAGAAATATGGGC GTACGACCCTCAGGTGACATGAGTGGTTTTTGAGTATCGCCGGAGCTTAT GCTCGCATCGTTGCGGATCACGCAAAATGACGGCTTGTTGCGCGCGTCGA TCGGTAACGGAGGATCTGCGCCTCGGGAACATGTTTGCTGGGGCGGCAAA AGAGGATCGTATTTCTGGCCCGCTGCTGTCTCGCCCACCTGCCAGTTTTA TTTTTTCTCTCGTTTGACAAAGTGTACCATCCAGACCCGGCGAGCGAATT CCCTTTTCCCGCCCTGTTTTTGTCTAATAATAGTAGAGGTCAGTCCAGCG TTGATACTGTAAGCTGCGAATTCAGAAAGAAATCGCCTCTCTCCGCGTAC GAAATATCGACAAAATATTCTCCCAACCGTTTTATTCTTGTTGCTGCCAC TTACCGCACCTGCCGATAAGAAAGTTAACAGCGTTCTCCATCTCCCCTGG GGTATTGTATACGCTATGCCATAGTGTTATGTAATGTAGTGTGCACTGTG GCGTATATCTCTATCTCGCGTTAGTGCAGTGCGGTGTTTCGCGTGGTAGG GTGGTTTTATCTCCTTTTCCATCCACAGTGCACTCCTCCTTATTTTAATT TATGTCCTGTTCTCTTCTGCTCGATTCTTTTTATTTTTTGATTCCTTGCT CTTGACATTTTACCTCCACGCCGCTGGGGTTGGGGGATGCGCGCCTCAAC TCGTAGCTCGGCGCGAAGACACTGCGCACGTTTCACGAAGCCGCCGGCCG CGCCGGGGGGCAGATCGAGGCCCGTCGCCCTCCCATGCGCCTCAGCTACT ACGGCGGCGGGCATTACGATTCCGTGTCTCCCATCGACGACCGTGCACCC CTCGGAGAAGAGTCACAGGCATCCGCATCCACCCCCGAACCCGGTGTTTT GGAGGAGTCGGCGCTGGAGAGATCGAGAAGGAGAAAAGCGGAGGCTGGGA GTGGCAGGTGCGAGGTCAAAACACACGAAATCTCAAGTGGCGGATGCATC GAGCTCCGTATTTTTTCTGTCCGTGTTGAGCGTCGTTTTTTTTTAAATCC AATATCGCGCGCCTTGTAGGCTTGGCTGGACGATTCACTGCTGTGTACGA AATACTTGGGTTGAGATCTTCGTTCGGCAATCCTGGTCGATGCCGAGTGC TATTAATCGGCCGTTGTTCCATCCACCTATTTAATAGACCCTCCGAGGCA CTGCGGTAGTTTTGTTTTAGTGAAAGGAAAGGCATCTGGGGTGGGCGCAA CTCTTGCCACGCACCGGTACAACCCTTGGAAGAGCTTTTAATAGGCAGAA ACCGAACATATCGTGGATCGCCGTCGATGAACGTGATTGGACAGGTGGGA TCCGGAGGAAATGAAGCTGCGGCAGGAAGATGAGAGCCCGTCGGAACAGA ATATCATGGACTACGCGCTGGCGTGGAGTAGGAACGTGTTCGAGACGCAG GTAAGGTTCGGTATACCTTTTGCCTGACCCCACCCTCTCTCAACCACTTG CCCGCGCCGAGTGTGTAGCGCACCCATCAAGGGAAGATTGCCCGCCTTAG CTCATTTATCCAGACGGAAATTCCTTTTTTGCCTCGTTTGCCTCAAGAGC AGGAAATGAACGCCTTTTCCCTTGGCCTTATGTTTTTACTTATATTTTCC CTTTTTCAACGGTTGGTTGGATTCCTGGGCGTTATCTCTGCTGCCTTTGT TCATGGTTCGCTTCGTGATCGAGCCCGAGACGTTGCCCGCAGAGCGCCTG ACCGTACCCCACCGGTCATTGAATCCAGCTCTCCCTCGAGGCGTTCGTGC ACGATATCACTCCTTCGCCTTGCTACCTTGGTTTATCGCGCAGTTCGACG ATATAGAGAGCGCCCTCGTGGCCAGCGTGGACCATATGGAGGAGTCGCAC CTGAGCTCACTCAAGGCTGCCTCGAGAGACAGCGAGCTCGTCGTGCTTCA GGTGATGAATAATCTTTGCAACCTCGTTAATTGCGACCAAAATTCGATTT TGTGAGGTGGTTCTTTTTCACTCTTTCCTCGAGCGGTCGACTCTGACCTG AATCCTGACTTCGGCTTGCGCACACCATTCTCGTTTGTCTTGTGAGGTTT ACCCCCCTTCGGCGAGTAAGGGGGTTCAGTACAAAAAATATCACCAGCAA GTGATAACTTGCCCCGAATGCAGCCCGTGAAGATTCCCCCCTATTTTTGT TGTTGAGATTTCACACTTTTTTGTTGACCTGTCGCCGTCCCTGCAGGAGG AGATGCTTCTCACCGCGCAGGCTCAGAGCGAAGAAGAGCAGCTCCGCAAA GCCCTCGAAGCGTCGCGCTGTACCGCGGCAGCAGCAGCCGCAGAGGCGGA AATGGTCAGCCAGGCTATTGCGGAATCTATGGCCTTGACGAGCGGGGGAT TGACAGAGAAGGCTGGAATGGTAGAAGGGAAACCATCACCCGGTGCCGAT GGGCAAGATAATCAAGTCCTCGGGGCCGCGGCGGCAGGCACCGCGGCGGC TGGCGAGGACGAGGACGAGGACTTCAAAAGGGCTCTTTTGTTATCAGGGA TGGTGGAGGAATGGGAGGCGCCACCGGAGGGCGTTGGTACCGGCCAAGAT TTTGATCTCGACGAGCTGCAAGAGGACCCCGAGTTGAAATTTGCCATTGA CGCTTCTCTGGCGGGCGACTGAAATTTCAATGGCACGGATTCGCGTCGTG TGGCTTGTTAAATGAAGAGTCTCGTCTTCCTCTTTTTCTGGTCGGCTGCG GCACTGCGTTTTTTTTCTTCTTCTGAACTAAAAGCGCGAAGCGGGAGGTT CTACGAACAGCTTACTCGCGCCACTGTCGGCCACGTGTTGTTCACGTGCC GTTCCTGCAGCATGGGTGCGTGTGCGAAAATGTAGTCTGGATTCATTCGG CTAGATTGGGGCTCTCCGCACCTTGTGCGGGTGCTTCCCTAGCTTCTCAC ACTTGTCGTCGAAAAAAAGAGAGAGTTGTGGGCTGCCGGGCGAATGAGGC TTCGTACTGTAAGCAGGTGCGATCACTCAAGTTTTCGTCTCGACTAATGT GTCAATCATCAGTGATGGCTCGCTGTTCTTGGCTGGTGGGCAATCAAAGT TTTCACCTCGGTAGCTTGAGTATAACACAAGACATATATGACACCCAGGG AGTGTGAATGTACATTGCATATAGGAAGCTCTATGGAAACCAGATGAGAA GGGGAGGAAGAAGTCAGATTACCCGCATCCTTTGGTATCCTCAAGGACAA CATACAGGACTTGATCTACATCAATGGTTGCGTCTACCTAACTCTTACAT GTCATGACTGTCAGTCAATCCATTGATTGGCCATTCAAGGAGGATAACTA TCAGTCAATCCATTGATTGGCCAGTCAAGGAGGATAAGGCTGTGCTTTTT TGCTTTGGTACCGACACCACCGGGGGGGAAATTATGTTGGTACTGAAATT CTGCACCACCAGCTGAATGTGTCGAAACGTTTAGTTTAATATGACTTGCT TTTGACATTAAAAGACTTCAGAATTATCCAACTGCATCAGGTTCGGACTT GAACGTTTGATTTCAGAAGAATGAAGAAAGGGAGCACTGAAC
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig10166:2791..6982-

>mRNA_P-canaliculata_contig10166.258.1 ID=mRNA_P-canaliculata_contig10166.258.1|Name=mRNA_P-canaliculata_contig10166.258.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2034bp|location=Sequence derived from alignment at P-canaliculata_contig10166:2791..6982- (Pelvetia canaliculata dioecious)
ATGGCCGCGTTCGTGAGATACGTGGCCATCAAGCGCCAGAACGCGGTCTG
GGGGGACGACCCGGAGGTCCAAGCGCTGTGCGAAATCTACGATAGACCGG
CAGAAATATGGGCGTACGACCCTCAGATGGCCGCGTTCGTGAGATACGTG
GCCATCAAGCGCCAGAACGCGGTCTGGGGGGACGACCCGGAGGTCCAAGC
GCTGTGCGAAATCTACGATAGACCGGCAGAAATATGGGCGTACGACCCTC
AGCTCGGCGCGAAGACACTGCGCACGTTTCACGAAGCCGCCGGCCGCGCC
GGGGGGCAGATCGAGGCCCGTCGCCCTCCCATGCGCCTCAGCTACTACGG
CGGCGGGCATTACGATTCCGTGTCTCCCATCGACGACCGTGCACCCCTCG
GAGAAGAGTCACAGGCATCCGCATCCACCCCCGAACCCGGTGTTTTGGAG
GAGTCGGCGCTGGAGAGATCGAGAAGGAGAAAAGCGGAGGCTGGGAGTGG
CAGCTCGGCGCGAAGACACTGCGCACGTTTCACGAAGCCGCCGGCCGCGC
CGGGGGGCAGATCGAGGCCCGTCGCCCTCCCATGCGCCTCAGCTACTACG
GCGGCGGGCATTACGATTCCGTGTCTCCCATCGACGACCGTGCACCCCTC
GGAGAAGAGTCACAGGCATCCGCATCCACCCCCGAACCCGGTGTTTTGGA
GGAGTCGGCGCTGGAGAGATCGAGAAGGAGAAAAGCGGAGGCTGGGAGTG
GCAGGTGGGATCCGGAGGAAATGAAGCTGCGGCAGGAAGATGAGAGCCCG
TCGGAACAGAATATCATGGACTACGCGCTGGCGTGGAGTAGGAACGTGTT
CGAGACGCAGGTGGGATCCGGAGGAAATGAAGCTGCGGCAGGAAGATGAG
AGCCCGTCGGAACAGAATATCATGGACTACGCGCTGGCGTGGAGTAGGAA
CGTGTTCGAGACGCAGTTCGACGATATAGAGAGCGCCCTCGTGGCCAGCG
TGGACCATATGGAGGAGTCGCACCTGAGCTCACTCAAGGCTGCCTCGAGA
GACAGCGAGCTCGTCGTGCTTCAGTTCGACGATATAGAGAGCGCCCTCGT
GGCCAGCGTGGACCATATGGAGGAGTCGCACCTGAGCTCACTCAAGGCTG
CCTCGAGAGACAGCGAGCTCGTCGTGCTTCAGGAGGAGATGCTTCTCACC
GCGCAGGCTCAGAGCGAAGAAGAGCAGCTCCGCAAAGCCCTCGAAGCGTC
GCGCTGTACCGCGGCAGCAGCAGCCGCAGAGGCGGAAATGGTCAGCCAGG
CTATTGCGGAATCTATGGCCTTGACGAGCGGGGGATTGACAGAGAAGGCT
GGAATGGTAGAAGGGAAACCATCACCCGGTGCCGATGGGCAAGATAATCA
AGTCCTCGGGGCCGCGGCGGCAGGCACCGCGGCGGCTGGCGAGGACGAGG
ACGAGGACTTCAAAAGGGCTCTTTTGTTATCAGGGATGGTGGAGGAATGG
GAGGCGCCACCGGAGGGCGTTGGTACCGGCCAAGATTTTGATCTCGACGA
GCTGCAAGAGGACCCCGAGTTGAAATTTGCCATTGACGCTTCTCTGGCGG
GCGACTGAGAGGAGATGCTTCTCACCGCGCAGGCTCAGAGCGAAGAAGAG
CAGCTCCGCAAAGCCCTCGAAGCGTCGCGCTGTACCGCGGCAGCAGCAGC
CGCAGAGGCGGAAATGGTCAGCCAGGCTATTGCGGAATCTATGGCCTTGA
CGAGCGGGGGATTGACAGAGAAGGCTGGAATGGTAGAAGGGAAACCATCA
CCCGGTGCCGATGGGCAAGATAATCAAGTCCTCGGGGCCGCGGCGGCAGG
CACCGCGGCGGCTGGCGAGGACGAGGACGAGGACTTCAAAAGGGCTCTTT
TGTTATCAGGGATGGTGGAGGAATGGGAGGCGCCACCGGAGGGCGTTGGT
ACCGGCCAAGATTTTGATCTCGACGAGCTGCAAGAGGACCCCGAGTTGAA
ATTTGCCATTGACGCTTCTCTGGCGGGCGACTGA
back to top