mRNA_P-canaliculata_contig101631.251.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig101631.251.1 vs. uniprot
Match: A0A2D6AIZ9_9BACT (Uncharacterized protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2D6AIZ9_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 1.890e-24 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 1 Query: 34 VSHLGMHCSEEELLYWKFFFANRKIRIAQEVFTETHSNPFVAGKSWYNYVIFDTYDILGVDIKFIVR 234 VSHLGMHC+ EEL+ W+ FF R I +AQEV T++H+NP +AGK YNYVIFDT ILGVD+KFIVR Sbjct: 89 VSHLGMHCTSEELISWRKFFEERDIAVAQEVLTDSHTNPVIAGKRSYNYVIFDTRYILGVDLKFIVR 155
BLAST of mRNA_P-canaliculata_contig101631.251.1 vs. uniprot
Match: A0A5B9NI12_9CAUD (Uncharacterized protein n=2 Tax=Myosmarvirus TaxID=2843428 RepID=A0A5B9NI12_9CAUD) HSP 1 Score: 99.0 bits (245), Expect = 2.510e-24 Identity = 46/73 (63.01%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 22 HEPRVSHLGMHCSEEELLYWKFFFANRKIRIAQEVFTETHSNPFVAGKSWYNYVIFDTYDILGVDIKFIVRKD 240 H+ +VSHLGMH S EEL+ W+ FFA I++AQEV TE+H+NP + YNYVIFDT DI+GVD+KFIVRKD Sbjct: 103 HDNQVSHLGMHVSAEELVQWRDFFAAEGIQVAQEVNTESHTNPAIKDTRRYNYVIFDTRDIIGVDLKFIVRKD 175
BLAST of mRNA_P-canaliculata_contig101631.251.1 vs. uniprot
Match: A0A482MII6_9CAUD (Glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase-like superfamily protein n=2 Tax=Myosmarvirus TaxID=2843428 RepID=A0A482MII6_9CAUD) HSP 1 Score: 96.7 bits (239), Expect = 2.010e-23 Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 22 HEPRVSHLGMHCSEEELLYWKFFFANRKIRIAQEVFTETHSNPFVAGKSWYNYVIFDTYDILGVDIKFIVRKD 240 H +VSHLGMH S EEL+ W+ FFA I++AQEV TE+H+NP + YNYVIFDT I+GVD+KFIVRKD Sbjct: 103 HNNQVSHLGMHVSAEELVQWRAFFAAEDIQVAQEVNTESHTNPAIKDSRRYNYVIFDTRGIIGVDLKFIVRKD 175
BLAST of mRNA_P-canaliculata_contig101631.251.1 vs. uniprot
Match: A0A514A8N1_9CAUD (Uncharacterized protein n=1 Tax=Panteoa phage Kyle TaxID=2589665 RepID=A0A514A8N1_9CAUD) HSP 1 Score: 94.4 bits (233), Expect = 1.820e-22 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 1 GNAWMHFHEPRVSHLGMHCSEEELLYWKFFFANRKIRIAQEVFTETHSNPFVAGKSWYNYVIFDTYDILGVDIKFIVR 234 GN W+ VSHLGMH + +ELL ++ +FA++ + IAQEV T+TH+N + + YNYVIFDTYD+LGVD+KFIVR Sbjct: 86 GNNWLENRPHCVSHLGMHVTNDELLSYRAYFASKGVAIAQEVMTQTHTNEAIKDERRYNYVIFDTYDLLGVDLKFIVR 163
BLAST of mRNA_P-canaliculata_contig101631.251.1 vs. uniprot
Match: A0A3S7L8V4_9CAUD (Uncharacterized protein n=4 Tax=Carpasinavirus TaxID=2733099 RepID=A0A3S7L8V4_9CAUD) HSP 1 Score: 93.6 bits (231), Expect = 2.710e-22 Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 1 GNAWMHFHEPRVSHLGMHCSEEELLYWKFFFANRKIRIAQEVFTETHSNPFVAGKSWYNYVIFDTYDILGVDIKFIVR 234 GN WM SHLGMH + E+L ++ FFA+ I +AQEVFT++H+NP + YNYVIFDT+DILG+D+KFIVR Sbjct: 88 GNNWMAHRPHCASHLGMHVTAEKLADFRAFFASEGIAVAQEVFTDSHTNPHIKDSRRYNYVIFDTFDILGIDLKFIVR 165
BLAST of mRNA_P-canaliculata_contig101631.251.1 vs. uniprot
Match: UPI001B800992 (hypothetical protein n=1 Tax=Xanthomonas pisi TaxID=56457 RepID=UPI001B800992) HSP 1 Score: 90.5 bits (223), Expect = 3.860e-22 Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 31 RVSHLGMHCSEEELLYWKFFFANRKIRIAQEVFTETHSNPFVAGKSWYNYVIFDTYDILGVDIKFIVR--KDAAP 249 +VSHLGMH + EL W+ FF I++AQEV T++H+NP +AGK YNYVIFDT +I+GVD+KFIVR +D P Sbjct: 1 QVSHLGMHVTAAELAEWRQFFNEEGIQVAQEVVTDSHTNPNIAGKRRYNYVIFDTREIIGVDLKFIVRLNQDGPP 75
BLAST of mRNA_P-canaliculata_contig101631.251.1 vs. uniprot
Match: I6ZXZ1_9CAUD (Uncharacterized protein n=7 Tax=Wifcevirus TaxID=2733141 RepID=I6ZXZ1_9CAUD) HSP 1 Score: 92.8 bits (229), Expect = 7.630e-22 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 22 HEPRVSHLGMHCSEEELLYWKFFFANRKIRIAQEVFTETHSNPFVAGKSWYNYVIFDTYDILGVDIKFIVR--KDAAP 249 H+ +VSHLGMH + EL W+ FF I++AQEV T++H+NP +AG+ YNYVIFDT +I+GVD+KFIVR +D P Sbjct: 103 HDNQVSHLGMHVTAAELAEWRKFFKEEGIQVAQEVVTDSHTNPNIAGQRRYNYVIFDTREIIGVDLKFIVRLNQDGTP 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101631.251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101631.251.1 >prot_P-canaliculata_contig101631.251.1 ID=prot_P-canaliculata_contig101631.251.1|Name=mRNA_P-canaliculata_contig101631.251.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=81bp MHFHEPRVSHLGMHCSEEELLYWKFFFANRKIRIAQEVFTETHSNPFVAGback to top mRNA from alignment at P-canaliculata_contig101631:6..260+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig101631.251.1 ID=mRNA_P-canaliculata_contig101631.251.1|Name=mRNA_P-canaliculata_contig101631.251.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=255bp|location=Sequence derived from alignment at P-canaliculata_contig101631:6..260+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101631:6..260+ >mRNA_P-canaliculata_contig101631.251.1 ID=mRNA_P-canaliculata_contig101631.251.1|Name=mRNA_P-canaliculata_contig101631.251.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at P-canaliculata_contig101631:6..260+ (Pelvetia canaliculata dioecious)back to top |