Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 275 |
| Cds size | 174 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815588.775991-UTR-P-canaliculata_contig101557:506..606 | 1622815588.775991-UTR-P-canaliculata_contig101557:506..606 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101557 507..606 - |
| 1693494153.1780398-UTR-P-canaliculata_contig101557:506..606 | 1693494153.1780398-UTR-P-canaliculata_contig101557:506..606 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig101557 507..606 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815588.7872694-CDS-P-canaliculata_contig101557:606..669 | 1622815588.7872694-CDS-P-canaliculata_contig101557:606..669 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101557 607..669 - |
| 1693494153.1858683-CDS-P-canaliculata_contig101557:606..669 | 1693494153.1858683-CDS-P-canaliculata_contig101557:606..669 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101557 607..669 - |
| 1622815588.8025224-CDS-P-canaliculata_contig101557:679..790 | 1622815588.8025224-CDS-P-canaliculata_contig101557:679..790 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101557 680..790 - |
| 1693494153.193938-CDS-P-canaliculata_contig101557:679..790 | 1693494153.193938-CDS-P-canaliculata_contig101557:679..790 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101557 680..790 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101557.244.1 >prot_P-canaliculata_contig101557.244.1 ID=prot_P-canaliculata_contig101557.244.1|Name=mRNA_P-canaliculata_contig101557.244.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=58bp
SFSEQATLAQFVPPGESKLPSESVVWDVTVPGSYLHSCSRAEMRMMFGLP
TAARRAT* back to topmRNA from alignment at P-canaliculata_contig101557:507..790- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101557.244.1 ID=mRNA_P-canaliculata_contig101557.244.1|Name=mRNA_P-canaliculata_contig101557.244.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=284bp|location=Sequence derived from alignment at P-canaliculata_contig101557:507..790- (Pelvetia canaliculata dioecious)
TCCTTCAGCGAACAGGCCACCCTGGCGCAGTTCGTGCCACCAGGCGAGTC
GAAATTGCCGAGTGAAAGCGTGGTGTGGGATGTTACTGTACCCGGTAGCT
ACCTACACAGTGCATTCGTAGTGCAGTCGGGCAGAAATGAGGATGATGTT
TGGATTGCCGACAGCGGCGCGTCGTGCCACATGACGCACAATAGCTCGAG
AATGTATAACATGAGGCCCCCTCCGCCCGGTCGCGAAACCATCACGATCG
GGGACCGTCGAAAAATTAACGTAGAGTGTATCGG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101557:507..790- >mRNA_P-canaliculata_contig101557.244.1 ID=mRNA_P-canaliculata_contig101557.244.1|Name=mRNA_P-canaliculata_contig101557.244.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=348bp|location=Sequence derived from alignment at P-canaliculata_contig101557:507..790- (Pelvetia canaliculata dioecious)
TCCTTCAGCGAACAGGCCACCCTGGCGCAGTTCGTGCCACCAGGCGAGTC
GAAATTGCCGAGTGAAAGCGTGGTGTGGGATGTTACTGTACCCGGTAGCT
ACCTACACAGTTCCTTCAGCGAACAGGCCACCCTGGCGCAGTTCGTGCCA
CCAGGCGAGTCGAAATTGCCGAGTGAAAGCGTGGTGTGGGATGTTACTGT
ACCCGGTAGCTACCTACACAGTTGCAGTCGGGCAGAAATGAGGATGATGT
TTGGATTGCCGACAGCGGCGCGTCGTGCCACATGATGCAGTCGGGCAGAA
ATGAGGATGATGTTTGGATTGCCGACAGCGGCGCGTCGTGCCACATGA back to top
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