mRNA_P-canaliculata_contig101244.214.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: A0A6H5KNF9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNF9_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 3.140e-11 Identity = 40/84 (47.62%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 16 GLPPLLRAAEKGITVAVRVLLGAPTINVNARAPRN--KKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGHL 261 G P+ RAA G+T A+R LL + +N R R K ++G MLLGAGA SLADRR WTA+HFA+WKGHL Sbjct: 29 GYLPIQRAAANGLTAALRELLSTSSTTINKRRKRGIGKIDLDATVPQSGKT----MLLGAGASASLADRRGWTALHFASWKGHL 108
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: A0A526RU79_9HYPH (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A526RU79_9HYPH) HSP 1 Score: 56.2 bits (134), Expect = 6.040e-8 Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 1 Query: 25 PLLRAAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGHLCE 267 PL AA KG ++ L+ P I++NARA +TAL+ AAR GHL+ V++L+ GAD++LAD+ + A KG E Sbjct: 8 PLSLAAAKGHFECIQALVKHPQIDINARADYYGRTALIEAARNGHLDVVRLLVEHGADVNLADKTGRNSALIEAIKGRHYE 88
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: UPI001EE6334B (ankyrin repeat, PH and SEC7 domain containing protein secG-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE6334B) HSP 1 Score: 57.4 bits (137), Expect = 1.420e-7 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 28 LLRAAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGHL 261 L A G VR +L A +++N R ++TA++ AAR GH E V++L+G GAD+SL D+ +H+A W G + Sbjct: 253 LYSACTDGDLGTVRWILAAGHVDINTRGGWRRRTAVMEAARWGHKEVVELLVGKGADVSLLDKYRRNILHYACWSGDV 330
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: A0A8I0KAH5_9RICK (Ankyrin repeat domain-containing protein n=1 Tax=Wolbachia endosymbiont of Pentalonia nigronervosa TaxID=1301914 RepID=A0A8I0KAH5_9RICK) HSP 1 Score: 56.2 bits (134), Expect = 3.230e-7 Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 22 PPLLRAAEKGITVAVRVLL----GAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAA-----WKGH 258 PPL +AAE +R LL G ++VNA RNK+TAL AA GH+EAV+ LL AGADI ++ D T ++ A+ ++GH Sbjct: 11 PPLHQAAENNEVDVMRGLLKKEGGEEDVDVNAVEDRNKETALHFAAGFGHIEAVEFLLAAGADIDAKNKYDETPLYCASRDHRDYQGH 98
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: UPI001CFBE906 (notch-regulated ankyrin repeat-containing protein n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBE906) HSP 1 Score: 53.1 bits (126), Expect = 5.710e-7 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1 Query: 37 AAEKGITVAVRVLLGAPT---INVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGH 258 A +KG T + LL T NVN+ P TAL + R G+LE V++L+ GADI LA+R W+A+H AA+ GH Sbjct: 18 AVKKGNTKELHSLLQNMTSSEFNVNSFFPEEGHTALHQSVRDGNLELVKLLVKFGADIRLANRDGWSALHIAAFGGH 94
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: A0A8K0SHU8_9HYPO (Glycerophosphoryl diester phosphodiesterase family-domain-containing protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0SHU8_9HYPO) HSP 1 Score: 54.3 bits (129), Expect = 1.810e-6 Identity = 29/75 (38.67%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 37 AAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGHL 261 AAE+G++ V+ ++ A ++VNA+ T L +A+ GHL+ V+ L+ AGAD + D R+W A+ +AA++GH+ Sbjct: 414 AAEQGLSELVKDIV-ACGVDVNAQDKTRSWTPLTIASVHGHLDTVKALILAGADTRVPDHREWLAIDYAAYRGHM 487
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: UPI001FEE97D0 (ankyrin repeat domain-containing protein n=1 Tax=Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 TaxID=2563958 RepID=UPI001FEE97D0) HSP 1 Score: 50.4 bits (119), Expect = 3.640e-6 Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 37 AAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKG 255 AA KG ++ L+ P I+++ARA +TAL+ AAR GHL+AV++L+ GAD++ AD+ + A KG Sbjct: 4 AAAKGHYDCIQALVRHPQIDIDARADYYGRTALIEAARNGHLDAVRLLVEHGADVNAADKTGRNSALIEAIKG 76
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: UPI00165810C7 (ankyrin repeat domain-containing protein n=1 Tax=Thauera sp. CAU 1555 TaxID=2767595 RepID=UPI00165810C7) HSP 1 Score: 52.8 bits (125), Expect = 3.740e-6 Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 10 HDGLPPLLRAAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGH 258 HDG PL AA +G + LL A ++A P N+ TAL+LAAR GH++AV+ LL AGAD +L + R TA +A +G+ Sbjct: 124 HDGWAPLHYAAFEGRLAILDKLL-ARGAKIDALTP-NRATALMLAARNGHVDAVRRLLRAGADTALKNDRGLTAAEWARTQGN 204
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: A0A670KBD5_PODMU (NOTCH regulated ankyrin repeat protein n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670KBD5_PODMU) HSP 1 Score: 51.2 bits (121), Expect = 4.040e-6 Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 37 AAEKGITVAVRVLL---GAPTINVNARAPRNKKTALVLAARAGHLEAVQMLLGAGADISLADRRDWTAMHFAAWKGH 258 A G T AV LL + NVNA P + TAL + G+LE V++L+ GAD+ LA+R W+A+H AA+ GH Sbjct: 27 AVRAGNTAAVHALLRTMNSCEFNVNAFGPEGQ-TALHQSVSDGNLELVKLLVRFGADVRLANRDGWSALHMAAFSGH 102
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Match: A0A7D7LGS5_9NOSO (Ankyrin repeat domain-containing protein n=1 Tax=Nostoc edaphicum CCNP1411 TaxID=1472755 RepID=A0A7D7LGS5_9NOSO) HSP 1 Score: 53.1 bits (126), Expect = 4.580e-6 Identity = 36/65 (55.38%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 28 LLRAAEKGITVAVRVLLGAPTINVNARAPRNK---KTALVLAARAGHLEAVQMLLGAGADISLAD 213 LL AAE+G VAVR L NVNAR R K +T L+LAA GHLE V +LL AGADI+ D Sbjct: 334 LLNAAEQGDVVAVRAWLSEGA-NVNARDQRRKTKNRTPLMLAASTGHLEVVNLLLDAGADINATD 397 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101244.214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101244.214.1 >prot_P-canaliculata_contig101244.214.1 ID=prot_P-canaliculata_contig101244.214.1|Name=mRNA_P-canaliculata_contig101244.214.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=92bp LTGHDGLPPLLRAAEKGITVAVRVLLGAPTINVNARAPRNKKTALVLAARback to top mRNA from alignment at P-canaliculata_contig101244:557..832+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig101244.214.1 ID=mRNA_P-canaliculata_contig101244.214.1|Name=mRNA_P-canaliculata_contig101244.214.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=276bp|location=Sequence derived from alignment at P-canaliculata_contig101244:557..832+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101244:557..832+ >mRNA_P-canaliculata_contig101244.214.1 ID=mRNA_P-canaliculata_contig101244.214.1|Name=mRNA_P-canaliculata_contig101244.214.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=552bp|location=Sequence derived from alignment at P-canaliculata_contig101244:557..832+ (Pelvetia canaliculata dioecious)back to top |