mRNA_P-canaliculata_contig101187.208.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: UPI001674C6B5 (enoyl-CoA hydratase-related protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001674C6B5) HSP 1 Score: 327 bits (837), Expect = 5.150e-111 Identity = 155/185 (83.78%), Postives = 170/185 (91.89%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFADR 555 RD GGELVLD +++DTP+IGAINGHAVGIGATMTMPMD+R+CSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKAD+I EEMYRAGYVSEVHPPE VL RALE+ARDIA NCSPTSTA+NKRLLR SMMG+G+LE+AAF +HIEESK LN AFVS DC EGV+AFLEKR P F+DR Sbjct: 92 RDAGGELVLDMFKLDTPLIGAINGHAVGIGATMTMPMDLRVCSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADVIKSEEMYRAGYVSEVHPPEAVLPRALEIARDIAANCSPTSTASNKRLLRNSMMGYGLLEEAAFTAHIEESKLLNAAFVSEDCHEGVKAFLEKRPPNFSDR 276
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: A0A420WD52_9PROT (Enoyl-CoA hydratase n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WD52_9PROT) HSP 1 Score: 257 bits (656), Expect = 1.410e-83 Identity = 126/187 (67.38%), Postives = 147/187 (78.61%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFADRSD 561 RD+GGELVL Y +TPIIGAING AVGIGATM +PMD+RI S +K+AFPFARRGI FDGA+SWFLPRLVG+AKA EWILK I+ +E+ AG +SE+ PE VL AL +ARDIAQNCSPTST NNKRLLR SM G G +++A F +HIEES L KAFVS DC EGV AF EKR+P+F D S+ Sbjct: 86 RDRGGELVLSMYDCETPIIGAINGAAVGIGATMLLPMDLRIASVTSKFAFPFARRGIAFDGASSWFLPRLVGFAKAQEWILKGSILKADELVSAGLISELKAPEEVLPHALNVARDIAQNCSPTSTINNKRLLRHSMQGFGAMDEAPFKAHIEESVLLEKAFVSEDCREGVTAFFEKRSPEFKDYSE 272
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: UPI000423C76D (enoyl-CoA hydratase-related protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000423C76D) HSP 1 Score: 256 bits (655), Expect = 2.140e-83 Identity = 132/186 (70.97%), Postives = 147/186 (79.03%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFADRS 558 RD GG L L ++ DTPII A+NG AVGIGATM PMDIRI S K K+AFPFARRGIV DGAASWFLPRLVG+AKANEWILKA I EE+ RAG+ SE+ PE VL AL LARDIA NCSPTSTANNKRLLRASM+G G L DA F H+ ESK L+KAFVS DC EGV++FLEKR P+F DR+ Sbjct: 89 RDAGGILNLAVFECDTPIIAAVNGAAVGIGATMLCPMDIRIGSNKAKYAFPFARRGIVCDGAASWFLPRLVGFAKANEWILKASFISAEELQRAGFFSEICDPEEVLPTALHLARDIAVNCSPTSTANNKRLLRASMLGGGTLGDAPFGLHMMESKMLSKAFVSPDCMEGVQSFLEKRPPQFKDRA 274
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: A0A520XL35_9ACTN (Enoyl-CoA hydratase n=2 Tax=Bacteria TaxID=2 RepID=A0A520XL35_9ACTN) HSP 1 Score: 239 bits (610), Expect = 1.190e-76 Identity = 123/186 (66.13%), Postives = 144/186 (77.42%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFADRS 558 RD GG L L T++ DTPII AING AVG+G TMT+PMDIRI S + K++FPFARRGIVFDGAAS+FLPRLVG+AKA EWILKAD+ EE G++SE+ PE VL RA+ELA+DIA NCSPTS ANNK+LLR SM G+G + +H ESK L KAFVS DC EGV+AFLEKRAP F DR+ Sbjct: 86 RDLGGVLNLRTHESDTPIIAAINGSAVGVGDTMTIPMDIRIASNRAKFSFPFARRGIVFDGAASYFLPRLVGFAKAQEWILKADLFSAEEALAGGFMSELTEPENVLPRAMELAQDIALNCSPTSVANNKKLLRESMAGNGPVA-----AHAMESKMLAKAFVSPDCAEGVQAFLEKRAPNFEDRA 266
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: A0A8J3CT96_9PROT (Enoyl-CoA hydratase n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CT96_9PROT) HSP 1 Score: 233 bits (594), Expect = 5.080e-74 Identity = 117/185 (63.24%), Postives = 141/185 (76.22%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFADR 555 RD GG+L L +V+ PII A+NG AVGIG TMT+P DIRI + K K+AFPF RRGIVFDGAAS+FLP+LVG++KA +W L + I P++ ++G SE+H VL RA+ELARDIA NCSP + A NKRLLRA+M+GHGVL F +H EES L KAFVS DCEEGVRAFLEKR PKFA+R Sbjct: 96 RDTGGQLNLAISRVNVPIIAAMNGSAVGIGLTMTLPCDIRIAARKAKYAFPFTRRGIVFDGAASFFLPKLVGFSKATQWSLTGNYIDPDDGLQSGLFSELHDNADVLPRAMELARDIAINCSPEAVAQNKRLLRATMLGHGVLAGGPFAAHQEESALLEKAFVSPDCEEGVRAFLEKREPKFANR 280
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: A0A848V7F7_9PROT (Enoyl-CoA hydratase n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V7F7_9PROT) HSP 1 Score: 211 bits (538), Expect = 9.960e-66 Identity = 103/185 (55.68%), Postives = 135/185 (72.97%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFADR 555 RD GG L L ++ +TPII A+NGH+VGIG TM + MD++I S+KTK+ PFARRGIVFDGAAS+FLPR++G + EW+L+ D I PEE AG +SE+ PE VL RA+ +A DIA N SPTS A+NK+LLR+SM+ G + +H++ES L KAF S DC EGV++F EKR+P+F DR Sbjct: 83 RDLGGMLNLRIFECNTPIIAAVNGHSVGIGLTMLLAMDMKIVSKKTKFVLPFARRGIVFDGAASFFLPRIIGMNRTQEWLLRGDPIKPEEALAAGMISEIVEPEDVLNRAMAIAEDIAVNVSPTSAAHNKQLLRSSMLRGGGYDSGPMAAHMQESDMLIKAFASHDCMEGVQSFFEKRSPEFKDR 267
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: UPI00039F0131 (enoyl-CoA hydratase-related protein n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI00039F0131) HSP 1 Score: 203 bits (517), Expect = 1.500e-62 Identity = 108/184 (58.70%), Postives = 127/184 (69.02%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFAD 552 RD GG L L ++ D PIIGAING A GIG TMT PMDIRI S+K K+A PF RRGIV+D A+SWFLPRL+G AKA+E L L +E G + E+ PE VL RALE+ARDIAQN SP S NK+LLR +M G DA H+ ES L ++F+SADC+EGVRAF EKRAPKF D Sbjct: 86 RDFGGVLTLRLWECDVPIIGAINGSAAGIGLTMTFPMDIRIASDKAKFALPFTRRGIVWDAASSWFLPRLIGLAKASELSLTGRTFLSDEALSLGLMHELAAPEDVLPRALEIARDIAQNVSPRSARLNKQLLRQAMADQGGPMDA----HLRESVTLAESFISADCQEGVRAFFEKRAPKFGD 265
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: UPI000566AEB8 (crotonase/enoyl-CoA hydratase family protein n=1 Tax=Pseudonocardia acaciae TaxID=551276 RepID=UPI000566AEB8) HSP 1 Score: 166 bits (421), Expect = 6.910e-48 Identity = 92/185 (49.73%), Postives = 115/185 (62.16%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFADR 555 RD GG L L TYQ P+I AING AVG+GATMT+PMDIR+ ++ K F FARRGIV DG ASWFLPR+VG AKA EW L + E + AG V VHP + +L AL+LAR+IA+N S S N++L+ M+G D +H ES+ L D EGV +FLEKR P++ R Sbjct: 84 RDTGGMLNLRTYQCTKPLIAAINGPAVGVGATMTLPMDIRLAADTAKIGFVFARRGIVADGCASWFLPRVVGIAKALEWTLTGRVFDAAEAHAAGLVRSVHPADELLPAALDLAREIAENTSAVSVTLNRQLMWR-MLG----ADHPMAAHEVESRTLEHVGRGPDAREGVESFLEKRPPRYPGR 263
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: UPI000410627B (crotonase/enoyl-CoA hydratase family protein n=1 Tax=Pseudonocardia spinosispora TaxID=103441 RepID=UPI000410627B) HSP 1 Score: 166 bits (419), Expect = 1.380e-47 Identity = 91/186 (48.92%), Postives = 116/186 (62.37%), Query Frame = 1 Query: 1 RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKFADRS 558 RD GG L L TY+ P+I AING AVG+GATMT+PMD+RI ++ K F FARRGIV DG ASWFLPR+VG +KA EW L + E AG V +HP E VL A+ELA++IA+N S S N++L+ M+G D +H ES+ L +AD EGV +FLEKR K+ R+ Sbjct: 84 RDSGGVLNLRTYEFSKPVIAAINGPAVGVGATMTLPMDVRIAADTAKMGFVFARRGIVADGCASWFLPRVVGISKALEWTLSGRVFGAAEALEAGLVRSLHPVEEVLPAAMELAKEIAENTSAISVTFNRQLMWR-MLG----ADHPMAAHEVESRALGFVGGTADAREGVESFLEKRPAKYPGRA 264
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Match: A0A6I4M1U9_9ACTN (Enoyl-CoA hydratase n=1 Tax=Actinomadura physcomitrii TaxID=2650748 RepID=A0A6I4M1U9_9ACTN) HSP 1 Score: 166 bits (419), Expect = 2.480e-47 Identity = 92/181 (50.83%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 4 DKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFPFARRGIVFDGAASWFLPRLVGWAKANEWILKADIILPEEMYRAGYVSEVHPPEGVLTRALELARDIAQNCSPTSTANNKRLLRASMMGHGVLEDAAFMSHIEESKYLNKAFVSADCEEGVRAFLEKRAPKF 546 D GG + L + P+I AING VGIGATM + MDIR+ SEK K F FARRGIV DGA+SWFLPR+VG KA EW L +I P EM RAG VS VH PE +L A +A++IA+N SP S A ++LL M+G + +H+ ES+ L + AD EGV +FLEKR P+F Sbjct: 94 DSGGMVTLRVFASRKPVIAAINGAGVGIGATMPLAMDIRLVSEKAKIGFLFARRGIVPDGASSWFLPRVVGIGKATEWALTGRMIQPREMLRAGLVSAVHAPEDLLPAARAVAKEIAENVSPVSAALTRQLLWR-MLG----AEHPMTAHVAESRALFERARGADAAEGVASFLEKRPPEF 269 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101187.208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101187.208.1 >prot_P-canaliculata_contig101187.208.1 ID=prot_P-canaliculata_contig101187.208.1|Name=mRNA_P-canaliculata_contig101187.208.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=189bp RDKGGELVLDTYQVDTPIIGAINGHAVGIGATMTMPMDIRICSEKTKWAFback to top mRNA from alignment at P-canaliculata_contig101187:450..1016- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig101187.208.1 ID=mRNA_P-canaliculata_contig101187.208.1|Name=mRNA_P-canaliculata_contig101187.208.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=567bp|location=Sequence derived from alignment at P-canaliculata_contig101187:450..1016- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101187:450..1016- >mRNA_P-canaliculata_contig101187.208.1 ID=mRNA_P-canaliculata_contig101187.208.1|Name=mRNA_P-canaliculata_contig101187.208.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1134bp|location=Sequence derived from alignment at P-canaliculata_contig101187:450..1016- (Pelvetia canaliculata dioecious)back to top |