mRNA_P-canaliculata_contig10115.203.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: D8LR25_ECTSI (4\'-phosphopantetheinyl transferase superfamily protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR25_ECTSI) HSP 1 Score: 199 bits (505), Expect = 8.360e-60 Identity = 94/131 (71.76%), Postives = 111/131 (84.73%), Query Frame = 1 Query: 1 LEVLPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 L +LP E +RV+ F REND++LALGSRLLQR VVSKVFGL+F ++ IRRTSE KP+F GV +AI G+VSPLL NWNFNVSHHGK+VAIASEP CLCGVD+VDT RR+NE+GPA+DY +YFT HFTD EW Sbjct: 98 LGLLPNTESARVRAFLRENDRKLALGSRLLQRAVVSKVFGLEFHEIDIRRTSESKPFFAGVVKAINDGSVSPLLKNWNFNVSHHGKYVAIASEPACLCGVDVVDTNRRANEQGPAEDYLQYFTGHFTDDEW 228
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: A0A6H5JCW1_9PHAE (ACPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW1_9PHAE) HSP 1 Score: 195 bits (496), Expect = 9.000e-58 Identity = 91/131 (69.47%), Postives = 111/131 (84.73%), Query Frame = 1 Query: 1 LEVLPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 L +LP E +RV+ F REND++LALGSRLLQR +VSKVFGL+F ++ IRRT+E KP+F GV +AI G+VSPLL NWNFNVSHHGK+VA+ASEP CLCGVD+VDT RR+NE+GPA+DY +YFT HFTD EW Sbjct: 96 LGLLPNAESARVRAFLRENDRKLALGSRLLQRALVSKVFGLEFDEIDIRRTAESKPFFAGVVKAIDDGSVSPLLKNWNFNVSHHGKYVAVASEPACLCGVDVVDTNRRANEQGPAEDYLQYFTGHFTDDEW 226
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: A0A0N7L8C9_PLAHL (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8C9_PLAHL) HSP 1 Score: 105 bits (262), Expect = 3.940e-25 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 10 LPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 LP+ ++ +V + E DQ+LALGSRLLQR ++ +V GL + + I RT E KPY+ R +++PLL WN+NVSHHG VAIAS+ L GVD+V R N+ D+ R F HF REW Sbjct: 26 LPDHDQKQVMRYVFEKDQKLALGSRLLQRKLIQEVSGLNYDAIKIARTPENKPYWNR-----DRNSLAPLL--WNYNVSHHGTIVAIASDSRALVGVDVVRLTDRPNQTTSIHDFIRAFKSHFNPREW 146
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: D0NCV0_PHYIT (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NCV0_PHYIT) HSP 1 Score: 103 bits (256), Expect = 7.090e-25 Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 10 LPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 LP+ E+ +V F DQ+LAL SRLLQR ++ ++FG+++ + I RT E KPY+ R +P +WNFNVSHHG V IAS+ L GVD+V R + + +D+FR FT HF EW Sbjct: 26 LPDHEQKQVTRFMFAKDQKLALASRLLQRQLIHELFGVEYDTIDIARTPENKPYW-------NRLPGNPAPSSWNFNVSHHGTIVTIASDARSLVGVDVVRLTDRPHRKTSIEDFFRAFTGHFNPGEW 146
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: A0A833T409_PHYIN (4'-phosphopantetheinyl transferase domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T409_PHYIN) HSP 1 Score: 103 bits (258), Expect = 1.420e-24 Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 10 LPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 LP+ E+ +V F DQ+LAL SRLLQR ++ ++FG+++ + I RT E KPY+ R +P +WNFNVSHHG V IAS+ L GVD+V R + + +D+FR FT HF EW Sbjct: 26 LPDHEQKQVTRFMFAKDQKLALASRLLQRQLIHELFGVEYDTIDIARTPENKPYW-------NRPPGNPAPSSWNFNVSHHGTIVTIASDARSLVGVDVVRLTDRPHRKTSIEDFFRAFTGHFNPGEW 146
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: W2R8Y1_PHYPN (ACPS domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2R8Y1_PHYPN) HSP 1 Score: 103 bits (258), Expect = 1.560e-24 Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 10 LPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 LP+ E+ +V F DQ+LAL SRLLQR ++ ++FG+K+ + I RT E KPY+ R G ++P+ +WN+NVSHHG VAIAS+ L GVD+V R + + ++FR F HF EW Sbjct: 31 LPDHEQKQVMRFMFAKDQKLALASRLLQRQLIHELFGVKYDTIAIARTPENKPYWN------RLGNLAPI--SWNYNVSHHGTVVAIASDSRALVGVDVVRLTDRPHRKTSIGEFFRAFADHFNPGEW 150
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: H3GI69_PHYRM (ACPS domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GI69_PHYRM) HSP 1 Score: 103 bits (258), Expect = 1.920e-24 Identity = 58/131 (44.27%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 1 LEVLPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 L L E+ +V F DQ+LALGSRLLQR ++ +FG+ + V I RT E KPY+ +R T SP WN+NVSHHG VAIAS L GVD+V R + +++FR FT +F REW Sbjct: 29 LHQLSVHEQQQVTRFMFAKDQKLALGSRLLQRQLIHDLFGVSYGAVDIARTPENKPYW-------KRPTESPAPPLWNYNVSHHGTVVAIASAAHALVGVDVVQLTDRPRRKTSVEEFFRAFTDYFNPREW 152
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: A0A2P4XKX7_9STRA (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKX7_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.110e-24 Identity = 55/128 (42.97%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 10 LPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 LPE E+ +V F DQ LALGSRLLQR ++ ++FG+ + + I RT E KPY+ + + S +WN+NVSHHG VAIAS+ L GVD+V R + + +D+FR F HF EW Sbjct: 31 LPEHEQKQVTRFMFAKDQNLALGSRLLQRQLIHELFGVNYDSIEIARTPENKPYW--------KRSESSTPSSWNYNVSHHGTIVAIASDSRSLVGVDVVRLTDRPHRKTSIEDFFRAFAGHFNPNEW 150
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: G4ZRU0_PHYSP (ACPS domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZRU0_PHYSP) HSP 1 Score: 101 bits (252), Expect = 2.560e-24 Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 1 LEVLPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 L LP E+ +V F DQ+LAL SRL+QR ++ ++FG+ + + I RT E KPY+ AE G P +WN+NVSHHG VAIAS+ L GVD+V R + +++FR F +F REW Sbjct: 27 LRQLPAHEQQQVTRFMFAKDQKLALASRLMQRQLIHELFGVDYKGIDIARTPENKPYWKRPAE----GAAPP---SWNYNVSHHGTIVAIASDSRALVGVDVVRLTDRPKRKMSVEEFFRAFADYFNPREW 150
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Match: A0A2G9IA63_9LAMI (Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9IA63_9LAMI) HSP 1 Score: 103 bits (256), Expect = 4.500e-24 Identity = 59/131 (45.04%), Postives = 77/131 (58.78%), Query Frame = 1 Query: 1 LEVLPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRTSERKPYFVGVAEAIRRGTVSPLLLNWNFNVSHHGKFVAIASEPVCLCGVDIVDTERRSNERGPADDYFRYFTQHFTDREW 393 + LP E S + F + DQ+ AL SRLLQ +V +V G+ F ++ IRRT E KP+ V V N+NFNVSHHG +VAIASEPVCL G+DIV NE AD++ R F+ +F+ EW Sbjct: 28 MSFLPHHEHSSITRFVKLEDQKRALVSRLLQYALVHQVLGIPFDEIIIRRTPEGKPFLV-------YDNVKSRFPNFNFNVSHHGDYVAIASEPVCLVGLDIVSHSIPMNET--ADEFIRSFSSYFSTLEW 149 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10115.203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10115.203.1 >prot_P-canaliculata_contig10115.203.1 ID=prot_P-canaliculata_contig10115.203.1|Name=mRNA_P-canaliculata_contig10115.203.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=131bp LEVLPEDERSRVKNFRRENDQRLALGSRLLQRGVVSKVFGLKFSDVTIRRback to top mRNA from alignment at P-canaliculata_contig10115:227..2247- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10115.203.1 ID=mRNA_P-canaliculata_contig10115.203.1|Name=mRNA_P-canaliculata_contig10115.203.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2021bp|location=Sequence derived from alignment at P-canaliculata_contig10115:227..2247- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10115:227..2247- >mRNA_P-canaliculata_contig10115.203.1 ID=mRNA_P-canaliculata_contig10115.203.1|Name=mRNA_P-canaliculata_contig10115.203.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=786bp|location=Sequence derived from alignment at P-canaliculata_contig10115:227..2247- (Pelvetia canaliculata dioecious)back to top |