Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 768 |
| Cds size | 762 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815583.3115356-CDS-P-canaliculata_contig100933:161..923 | 1622815583.3115356-CDS-P-canaliculata_contig100933:161..923 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100933 162..923 - |
| 1693494150.3071308-CDS-P-canaliculata_contig100933:161..923 | 1693494150.3071308-CDS-P-canaliculata_contig100933:161..923 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100933 162..923 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815583.324331-UTR-P-canaliculata_contig100933:923..929 | 1622815583.324331-UTR-P-canaliculata_contig100933:923..929 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100933 924..929 - |
| 1693494150.3162565-UTR-P-canaliculata_contig100933:923..929 | 1693494150.3162565-UTR-P-canaliculata_contig100933:923..929 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100933 924..929 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100933.178.1 >prot_P-canaliculata_contig100933.178.1 ID=prot_P-canaliculata_contig100933.178.1|Name=mRNA_P-canaliculata_contig100933.178.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=254bp
MLELRCTRLKKIDALSNVNLSYLLLDGCKKLTSLNPLKNVASLKELDVRD
CYGFKKIDLSDWKQRNLKKITVSDCDGLVVLNGFSQCSKRCELLIDNCNA
LKEIQIQDDSSLDSITVNRCPNLDSINGLPQALSELRIYFCGALTKVSGG
KIPNLDSVEIGACSKLVSFDRYLENVKYFKLIQCHGIKQLSLRQPMPRLA
SVSVEYCDGLIAIDGLPESVNKLKVTGCEALKRVTPTAGLPNLSEANFID
CPNL back to topmRNA from alignment at P-canaliculata_contig100933:162..929- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100933.178.1 ID=mRNA_P-canaliculata_contig100933.178.1|Name=mRNA_P-canaliculata_contig100933.178.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=768bp|location=Sequence derived from alignment at P-canaliculata_contig100933:162..929- (Pelvetia canaliculata dioecious)
ATCGAGATGCTCGAGTTACGGTGCACTCGATTGAAGAAAATCGATGCGTT
ATCTAACGTGAACCTCTCGTATCTTTTGCTTGATGGGTGCAAAAAACTGA
CTAGCCTAAACCCGCTAAAGAACGTTGCATCCTTAAAAGAATTAGATGTG
CGAGATTGTTATGGATTTAAAAAAATCGATCTAAGCGACTGGAAACAGAG
AAACCTCAAGAAGATTACCGTTAGCGATTGTGACGGACTAGTTGTTTTAA
ATGGCTTTTCACAATGCAGCAAAAGATGCGAGCTGTTGATAGATAATTGC
AACGCTCTGAAAGAAATTCAAATTCAAGATGACTCCAGTCTTGATTCTAT
TACTGTGAACCGGTGTCCGAACCTCGATTCAATTAACGGTTTGCCTCAAG
CTTTGTCTGAGCTACGGATCTATTTTTGCGGAGCGTTGACAAAAGTTAGT
GGCGGAAAAATACCAAACCTTGATTCCGTCGAAATTGGAGCCTGTAGCAA
GCTTGTTTCGTTTGATAGGTACCTCGAAAATGTAAAGTATTTCAAATTAA
TTCAATGTCATGGCATCAAGCAGCTAAGTTTGAGGCAGCCTATGCCACGA
CTTGCAAGCGTTTCAGTCGAGTACTGCGATGGCCTGATTGCAATCGACGG
TCTACCAGAGAGTGTCAACAAACTGAAAGTCACCGGGTGTGAGGCTTTGA
AACGAGTCACACCGACGGCCGGTCTCCCGAATCTTAGCGAAGCAAATTTC
ATAGATTGCCCGAATCTC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100933:162..929- >mRNA_P-canaliculata_contig100933.178.1 ID=mRNA_P-canaliculata_contig100933.178.1|Name=mRNA_P-canaliculata_contig100933.178.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1524bp|location=Sequence derived from alignment at P-canaliculata_contig100933:162..929- (Pelvetia canaliculata dioecious)
ATGCTCGAGTTACGGTGCACTCGATTGAAGAAAATCGATGCGTTATCTAA
CGTGAACCTCTCGTATCTTTTGCTTGATGGGTGCAAAAAACTGACTAGCC
TAAACCCGCTAAAGAACGTTGCATCCTTAAAAGAATTAGATGTGCGAGAT
TGTTATGGATTTAAAAAAATCGATCTAAGCGACTGGAAACAGAGAAACCT
CAAGAAGATTACCGTTAGCGATTGTGACGGACTAGTTGTTTTAAATGGCT
TTTCACAATGCAGCAAAAGATGCGAGCTGTTGATAGATAATTGCAACGCT
CTGAAAGAAATTCAAATTCAAGATGACTCCAGTCTTGATTCTATTACTGT
GAACCGGTGTCCGAACCTCGATTCAATTAACGGTTTGCCTCAAGCTTTGT
CTGAGCTACGGATCTATTTTTGCGGAGCGTTGACAAAAGTTAGTGGCGGA
AAAATACCAAACCTTGATTCCGTCGAAATTGGAGCCTGTAGCAAGCTTGT
TTCGTTTGATAGGTACCTCGAAAATGTAAAGTATTTCAAATTAATTCAAT
GTCATGGCATCAAGCAGCTAAGTTTGAGGCAGCCTATGCCACGACTTGCA
AGCGTTTCAGTCGAGTACTGCGATGGCCTGATTGCAATCGACGGTCTACC
AGAGAGTGTCAACAAACTGAAAGTCACCGGGTGTGAGGCTTTGAAACGAG
TCACACCGACGGCCGGTCTCCCGAATCTTAGCGAAGCAAATTTCATAGAT
TGCCCGAATCTCATGCTCGAGTTACGGTGCACTCGATTGAAGAAAATCGA
TGCGTTATCTAACGTGAACCTCTCGTATCTTTTGCTTGATGGGTGCAAAA
AACTGACTAGCCTAAACCCGCTAAAGAACGTTGCATCCTTAAAAGAATTA
GATGTGCGAGATTGTTATGGATTTAAAAAAATCGATCTAAGCGACTGGAA
ACAGAGAAACCTCAAGAAGATTACCGTTAGCGATTGTGACGGACTAGTTG
TTTTAAATGGCTTTTCACAATGCAGCAAAAGATGCGAGCTGTTGATAGAT
AATTGCAACGCTCTGAAAGAAATTCAAATTCAAGATGACTCCAGTCTTGA
TTCTATTACTGTGAACCGGTGTCCGAACCTCGATTCAATTAACGGTTTGC
CTCAAGCTTTGTCTGAGCTACGGATCTATTTTTGCGGAGCGTTGACAAAA
GTTAGTGGCGGAAAAATACCAAACCTTGATTCCGTCGAAATTGGAGCCTG
TAGCAAGCTTGTTTCGTTTGATAGGTACCTCGAAAATGTAAAGTATTTCA
AATTAATTCAATGTCATGGCATCAAGCAGCTAAGTTTGAGGCAGCCTATG
CCACGACTTGCAAGCGTTTCAGTCGAGTACTGCGATGGCCTGATTGCAAT
CGACGGTCTACCAGAGAGTGTCAACAAACTGAAAGTCACCGGGTGTGAGG
CTTTGAAACGAGTCACACCGACGGCCGGTCTCCCGAATCTTAGCGAAGCA
AATTTCATAGATTGCCCGAATCTC back to top
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