mRNA_P-canaliculata_contig10093.177.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: D7FQ84_ECTSI (Glycerophosphocholine acyltransferase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ84_ECTSI) HSP 1 Score: 544 bits (1402), Expect = 2.140e-181 Identity = 262/339 (77.29%), Postives = 298/339 (87.91%), Query Frame = 2 Query: 2 AVTGDPLKSVRLHFQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWCPLDPWRGGSPGMGPECSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRYWAAMEAEAAAKAEALLIKAAKVRERELTR 1018 AVTGDPLKSVRLH +EKRSKPF+MRM+DKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVM+PVLLLMRYPDYRQRKWLFFY DFCYYVQ CM+AIFV+PH CRL K IF++ MGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRW PLDP RGG+ G PEC +G ++GD+ A+ +Y+ WQ+LY+ KTE D+ KLDADPEIQTSLRWLTTSP N MH+IVL +MR+ FK+DETF+P T KTKMIFMGSQLV+T++VSLPTPFLYN+K AS+SL VF+ ALWNSSNYYI+VFSRRYW +MEAE+AAKAEAL++KA + RERE R Sbjct: 119 AVTGDPLKSVRLHLEEKRSKPFVMRMLDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMVPVLLLMRYPDYRQRKWLFFYYDFCYYVQFWCMVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQDGFDMGDVGTAMGMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKIVLALMRKTGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQSMEAESAAKAEALVVKATRQRERERLR 457
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: A0A836CMU1_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU1_9STRA) HSP 1 Score: 328 bits (842), Expect = 2.450e-99 Identity = 150/310 (48.39%), Postives = 217/310 (70.00%), Query Frame = 2 Query: 23 KSVRLHFQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWCPLDPWRGGS--PGMGPECSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRYWAAME 946 + +R H +K +P ++R++DK AFT GVL +++SE+VLL+ PERFW+WYS +IP L+ +RYP YR RKW +F LDFCY+V + CM+ ++V P C K+ F++ G L+WA+P WRNSLVFHD++K +S ++H FP+ L L+ RW W+ G+ PG P+C + + L D +A+ +Y WQ++Y+IKTE DR L ADP +QTSLRWLTT KN +H++VL RR++ +DETF P TLKTK+IFM +Q+ +T++ P P LY + A + VL +F A+WN N+YI+VF+RRYWA +E Sbjct: 73 EKIRDHILDKGQEPLVVRLLDKVAFTFGVLNIVISEWVLLVYPERFWMWYSAIIPTLIAVRYPYYRMRKWQYFLLDFCYFVHLFCMVQLYVFPDSCMGMKLAFLFANGPLIWAIPSWRNSLVFHDMEKTSSVYVHFFPALLTLSTRWHAT--WQHGAAPPGGAPQCDDTVTLLDFGLAMAVYTAWQIVYFIKTEVVDRPILLADPALQTSLRWLTTDSKNALHKLVLLAARRMRIMARDETFEPSTLKTKIIFMSTQMAFTVVTMAPVPALYASYPAHAAFVLAMFGCAVWNGGNFYIEVFARRYWADLE 380
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: W7TS45_9STRA (Glycerophosphocholine acyltransferase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS45_9STRA) HSP 1 Score: 283 bits (723), Expect = 3.490e-82 Identity = 144/310 (46.45%), Postives = 200/310 (64.52%), Query Frame = 2 Query: 2 AVTGDPLKSVRLHFQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWCPLDPWRGGSPGMGPECSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRY 931 AVTGD +K VR H +E P + R +DK AFT GVL + VSE++L+ P FW WY +IPVL+ R P YR KW FF LDFCY+VQV C++ ++ P +C L K IF+ G L +AVP+WRNSLVFHD++K+TS +IH++P L LRW P P S + +++ D+ A +Y+ WQ++YY+K E DR++L+ADPE+QTSLRWL KN +H++VL + R DE F+ TLKTK IF+ +Q +YTL+ LP +Y++ V+ L +F A++N +NYYIDVFS RY Sbjct: 125 AVTGDEMKRVRDHIRE----PPVARRLDKLAFTFGVLNLTVSEFMLIKFPHVFWAWYMAVIPVLVFFRIPHYRSLKWGFFLLDFCYFVQVLCILQLYAFPSNCNLLKSIFLLANGPLAFAVPVWRNSLVFHDLEKITSLYIHVYPGLLLYALRWYPSSP----SAAATLDACGSMDVKDLLPAAVVYLAWQIMYYVKIEILDRARLEADPELQTSLRWLAKDHKNALHRLVLRLTRATGVLAPDERFDHRTLKTKSIFILTQFIYTLLTCLPALVIYHSFQLHVAYGLGMFTVAVFNGANYYIDVFSVRY 426
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: A0A7S2B0L6_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0L6_9STRA) HSP 1 Score: 260 bits (665), Expect = 4.370e-73 Identity = 135/319 (42.32%), Postives = 198/319 (62.07%), Query Frame = 2 Query: 5 VTGDPLKSVRLHFQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWCPLDPWRGGSPGMGPECSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRYWAAMEAEAAA 961 +TG +SV + Q +R KP ++R++DK++F GV T++VSE +LLL PE F+LWY++ + VLL+ R+ Y+ +KW +F LDFCY+ Q+C + F P C L + F Y +G L +V +WRNSLVFHDVDK+T+ +IH+ PSWL RW L G +C E + A Y+ WQ+L+Y+KTE D + L++D + QTSLRW+ +H++VLW+MR+ + E F+P T KTK+IFM SQ V+T I LPT ++ L +++ V+ VF ++N YYI+VFSRRY+ E A A Sbjct: 106 ITGGQSESVLDYLQSQRKKPTVVRLIDKSSFVGGVFTLLVSECILLLYPEYFFLWYTIFMSVLLVARWHSYQFKKWTYFMLDFCYFAQLCNYLQFF-FPRSCTLFHMNFAYAVGPLCCSVIIWRNSLVFHDVDKVTTLYIHILPSWLVYANRW--LIAGTGSRFEELAQC-EAFGTAGLFTAFLGYLFWQVLFYVKTEVVDAAFLNSDKDHQTSLRWMALDDSKAVHRLVLWLMRKYQLMGPKERFDPRTHKTKIIFMASQFVFTAITILPTFLVHKYFLVNLAYVIAVFTAGVYNGGEYYIEVFSRRYYTQFEKTATA 420
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: A0A0L0DIY4_THETB (Glycerophosphocholine acyltransferase 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIY4_THETB) HSP 1 Score: 247 bits (631), Expect = 3.960e-69 Identity = 131/323 (40.56%), Postives = 194/323 (60.06%), Query Frame = 2 Query: 5 VTGDPLKSVRLHFQEKRSKPFMMRMMDKAAFTVGVLT-MIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWCPLDP------------WRGGSPGMGPECSEGIN-LGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRY 931 VTG +R H +E+ P +RM DK +F +G+L +I++EYV++L P F W+++++P L + RY Y + W F +DFCY VQ C+I+++ + IF G LLWA+P WR S+VFH +DK+TS FIH FP+ L TL W P P W + M I+ +G M + +Y++WQ+LYY KTE +DRSK +AD + TSLRWL+ KN MH++VL ++RR+ E F+ T+KTK+IFM +Q VYT+I LP P +Y++ ++L++ + +LWN +N+Y DVFSRRY Sbjct: 103 VTGKEDVRIRDHIRERIRTPKAVRMKDKLSFLLGILVGIILTEYVMILYPVLFGAWFALIMPALCVARYVMYAKLNWHLFLMDFCYVVQALCLISVWTPASATEWHAAIFTLANGPLLWAIPTWRCSMVFHSLDKVTSVFIHAFPAMLTFTLHWYPAVPEGVSLATAATTQWAEYNT-MASHFHAPISFVGWFVMPMAIYLVWQVLYYYKTEVRDRSKFEADKTLTTSLRWLSADDKNPMHKLVLSLLRRIGVMGPTEKFDASTVKTKVIFMATQFVYTVITILPIPIIYSSVHLHIALLVALLGVSLWNGANFYFDVFSRRY 424
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: A0A485LCA6_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCA6_9STRA) HSP 1 Score: 237 bits (605), Expect = 3.030e-66 Identity = 119/292 (40.75%), Postives = 175/292 (59.93%), Query Frame = 2 Query: 62 PFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWCPLDPWRG--GSPGMGPECSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRY 931 P+ ++ +DK FT+GVL +++++Y ++ P FW+WY PV++ +R +++ W +F LDFCY+V C M+ + R +V+F+Y G L+WAV LWRNSLVFHDVD+M+ FIHL P L +RW P P P + +++ D A LY+ WQ Y++KTE DR KLDA PE+ TSLRWLTT KN VL + R ++ E +N T KTK+IF+ +QLVYTL PTPFL+ + + + +F A+ N ++YYI+VF++ Y Sbjct: 90 PYYVKFLDKTQFTLGVLGVMLTQYFIVARPTHFWIWYLFCTPVVIALRIIYFKRVGWQYFLLDFCYFVIFCSMLHVTTFYDSDRFFRVLFIYANGPLVWAVVLWRNSLVFHDVDRMSGVFIHLMPCLLYYAIRWYGCAPLFALPRFPSTDPP-HDSLDVVDFTFATILYLFWQACYFVKTEMFDREKLDARPELLTSLRWLTTDKKNGFSLFVLSLCRAMRVMGPTEEYNSRTTKTKLIFLAAQLVYTLGTFAPTPFLFRSHFVHCAYIQFIFAAAVHNGASYYIEVFAKMY 380
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: A0A6G0WYG3_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYG3_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.820e-65 Identity = 120/304 (39.47%), Postives = 178/304 (58.55%), Query Frame = 2 Query: 38 HFQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRW----CPLDPWRG--GSPGMGPECSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRY 931 H + P+ ++ +DK FT+GVL +++++Y ++ P FWLWY V P+++ +R +++ W +F LDFCY+V C M + L +V+F+Y G L+WAV LWRNSLVFHDVD+M+ FIHL P L +++W PL + G G P GP + + L D A Y++WQ LY+ KTE DR KLDA P++ TSLRWLTT KN VL I R++ + E ++P T KTK+IF+ Q VYT LPT ++ + + +F A+ N ++YY +VF++ Y Sbjct: 53 HEDQSIKDPYYVKFLDKTQFTLGVLGVMLTQYFVVARPSHFWLWYFVCTPIVIALRIIYFKRVGWQYFLLDFCYFVIACSMTHVTFFYDSTHLFRVLFIYANGPLVWAVVLWRNSLVFHDVDRMSGVFIHLMPCLLYYSIQWFGCASPLSIFSGSSGQPASGPV--DSLELADFGYATIGYLIWQTLYFAKTEVVDREKLDARPDLLTSLRWLTTDKKNGFSLFVLAICRQIGVMGRTEEYDPKTTKTKIIFVTGQFVYTFCTFLPTILIFRSHFLHCLYIQFIFAAAVHNGASYYFEVFAKIY 354
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: A0A7S3MDK0_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDK0_9STRA) HSP 1 Score: 239 bits (611), Expect = 4.230e-65 Identity = 124/313 (39.62%), Postives = 190/313 (60.70%), Query Frame = 2 Query: 5 VTGDPLKSVRLHFQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRW--CPLDPWRGGSPG--MGPECSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRY 931 VTGD K +R +E + +P ++ DK AFTVGVL M V +Y LL P+ F WY+ +IP++L RY +R +F +DFCY+ C M+ ++++ K +F+ G L A+P+WRNS VFHD DK+ S +IH+ PS L TLR LD +R PG G + + L D +A+ LY+ WQ +Y KTE+ D+S+LD+DP + TSLRWL KN + L + R + F K+E ++ T+KTK++F+ +QL++TL+ LPTP +Y+ ++ +L + A++N ++YI+VFS+RY Sbjct: 44 VTGDEKKRIRDRIRETQDEPRYVKFFDKVAFTVGVLNMGVCQYFLLNRPDLFPYWYAAIIPLILASRYFYFRSSNNQYFMIDFCYFTIFCTMVNLWLIRDSALFFKTVFICATGPLTLAIPVWRNSFVFHDYDKIVSVYIHILPSMLYYTLRHNNSSLDIFRQAIPGDVCGSANCDRLYLTDYLLAVLLYMFWQFIYLYKTEFLDKSRLDSDPSLMTSLRWLAQDTKNAAARFFLKMFRLIGVFSKEEDYDSRTMKTKIVFVVAQLIFTLVSFLPTPLMYHYSGFHLTWILFIVTSAVFNGGSFYIEVFSKRY 356
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: A0A482S386_9ARCH (DUF2838 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S386_9ARCH) HSP 1 Score: 232 bits (591), Expect = 2.160e-64 Identity = 123/325 (37.85%), Postives = 195/325 (60.00%), Query Frame = 2 Query: 5 VTGDPLKSVRLHFQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRW--------CPLDP-----------WRGGSPGMGPECSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFS 922 VTG+ K +R H +E + +P +++MDK FT+GVL + +Y LL +PE F +WY+V++PVLL+ R +R + W +F LDFCY+V +C ++ I VL D K+ F++ GSL A+P+WRNSL+FHD DK+ S ++H+ P L TLRW C P S + + L D AL LY WQ++Y +KTE D+ KLD++P+I TSLRW+ KN + VL I RR+ F E FN ++KTK++F+ SQLV+T++ +P+ +Y++++ + + ++F +++N +++YI+V S Sbjct: 29 VTGNEKKRIRDHLREAQQQPQYVKLMDKLGFTMGVLNITACQYFLLNIPEYFPVWYAVVLPVLLISRLYHFRSQNWHYFLLDFCYFVILCTLLNITVLRSDVFF-KMCFIFATGSLPIAIPVWRNSLIFHDYDKIVSVYVHILPCMLYYTLRWHADYTGSQCLHTPSHTXXXXXXXXXXXASSYLSDSPCPPLCLSDYVAALLLYFAWQVMYILKTEVWDKLKLDSNPDILTSLRWMAKDTKNATARSVLKICRRIGVFGMKEEFNSTSMKTKLVFVSSQLVFTMVSFIPSYIVYHSRMGHLLYIGLIFTISVFNGASFYIEVSS 352
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Match: A0A397CAQ5_9STRA (Glycerophosphocholine acyltransferase 1 n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CAQ5_9STRA) HSP 1 Score: 225 bits (574), Expect = 3.740e-62 Identity = 115/299 (38.46%), Postives = 184/299 (61.54%), Query Frame = 2 Query: 62 PFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVQVCCMIAIFVLPHDCR-LNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRW--CP-----LDPWRGGSPGMGPE-CSEGINLGDMAMALFLYVLWQLLYYIKTEYQDRSKLDADPEIQTSLRWLTTSPKNTMHQIVLWIMRRLKFFKKDETFNPHTLKTKMIFMGSQLVYTLIVSLPTPFLYNNKLASVSLVLIVFIFALWNSSNYYIDVFSRRY 931 P+ ++ +DK FT+GVL +++++Y ++ P +FW+WY V PV++ +R +++ W +F LDFCY+V ++ + + P D R L +V+F+Y G L+WAV LWRNSLVFHD+D+M+ FIH+ P L + W C L P + + P + ++ D A A+ Y++WQ+LY++KTE DR+ LDA P++ TSLRWLTT KN +VL + R E ++P T KTK IF+ +QLVYT++ PTP L+ + + ++F+ A+ N ++YY +VF++ Y Sbjct: 46 PYYVKFLDKTQFTMGVLGVMLTQYFVVARPTQFWMWYLVCTPVVVALRIMYFKRVGWQYFLLDFCYFVTFLSIVHVTLAPSDDRRLFRVLFIYANGPLVWAVVLWRNSLVFHDIDRMSGVFIHIMPCLLYYCVHWHGCSSSSMLLHPPPSVNYFLPPSHAQDSLDGVDFAYAIIGYLIWQVLYFVKTEVVDRAALDARPDLLTSLRWLTTDRKNGFSLLVLGLCRYGGIMGPTEAYDPRTTKTKAIFVAAQLVYTVVTFAPTPLLFTSHFLHCMYIQLIFVAAVHNGASYYFEVFAKLY 344 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10093.177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10093.177.1 >prot_P-canaliculata_contig10093.177.1 ID=prot_P-canaliculata_contig10093.177.1|Name=mRNA_P-canaliculata_contig10093.177.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=417bp MMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYback to top mRNA from alignment at P-canaliculata_contig10093:5232..11149- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10093.177.1 ID=mRNA_P-canaliculata_contig10093.177.1|Name=mRNA_P-canaliculata_contig10093.177.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5918bp|location=Sequence derived from alignment at P-canaliculata_contig10093:5232..11149- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10093:5232..11149- >mRNA_P-canaliculata_contig10093.177.1 ID=mRNA_P-canaliculata_contig10093.177.1|Name=mRNA_P-canaliculata_contig10093.177.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2502bp|location=Sequence derived from alignment at P-canaliculata_contig10093:5232..11149- (Pelvetia canaliculata dioecious)back to top |