mRNA_P-canaliculata_contig100923.174.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: UPI00135A6769 (gamma-glutamyltransferase n=2 Tax=unclassified Psychromonas TaxID=2614957 RepID=UPI00135A6769) HSP 1 Score: 311 bits (796), Expect = 1.070e-99 Identity = 158/225 (70.22%), Postives = 188/225 (83.56%), Query Frame = 1 Query: 4 MKKKLTKIFLATSITIVLTACSGGGSSDNDDVTVDCEIDQANPECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATS----FIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYYV 666 MK+KL++IFLATS ++L +C+ + + + +V+CEIDQANPECASGFEE+ A IAN+Y+AVTNNPLATDAAYDVLK+GGNAIDAAIAAQMVLTLVEPQSSGIGGG FMLY+DA+TK I HF+GRE APSAATGDMF+VDGVA S F +RV+GGKSTGVPG LKMLK AHDE GT W DLF PAI+L+EEGFEVS+RL SI GD++ CK + + S +YV Sbjct: 2 MKRKLSRIFLATSAVMMLASCNDSDET-SVEASVNCEIDQANPECASGFEERSAVIANDYMAVTNNPLATDAAYDVLKDGGNAIDAAIAAQMVLTLVEPQSSGIGGGGFMLYYDADTKNIVHFDGRETAPSAATGDMFYVDGVAPSGYNGFFQRVLGGKSTGVPGTLKMLKKAHDEYGTKVWSDLFTPAISLAEEGFEVSERLEASIEGDAVFCKDSDNTSDFYV 225
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: A0A2M9TE98_9GAMM (Glutathione hydrolase proenzyme n=9 Tax=Halomonadaceae TaxID=28256 RepID=A0A2M9TE98_9GAMM) HSP 1 Score: 192 bits (488), Expect = 2.250e-54 Identity = 101/181 (55.80%), Postives = 125/181 (69.06%), Query Frame = 1 Query: 121 QANPECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 + +PE SG+EEK + NPLATDA Y VLK GGNAIDAA+A QMVLTLVEPQSSGIGGGAF++++D + F +GRE APSAATG++F DG F++ V G S GVPGVL+ML+ AH E G AW +LF PAITL+EEGF VS RL TS+A D+ L + + + YY Sbjct: 28 EMSPEVGSGYEEKPGWAVESFAVAAANPLATDAGYQVLKAGGNAIDAAVAVQMVLTLVEPQSSGIGGGAFLMHYDGSNVQAF--DGRETAPSAATGELFMEDGEPLPFMDAVASGLSVGVPGVLRMLEQAHAEHGQLAWRELFTPAITLAEEGFAVSHRLHTSLANDTALREDPLARAFYY 206
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: A0A4U3C9X6_9GAMM (Glutathione hydrolase proenzyme n=21 Tax=Halomonadaceae TaxID=28256 RepID=A0A4U3C9X6_9GAMM) HSP 1 Score: 191 bits (484), Expect = 8.570e-54 Identity = 100/178 (56.18%), Postives = 123/178 (69.10%), Query Frame = 1 Query: 130 PECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 PE SGFEEK A+ + NPLATDA Y VLK GGNAIDAA+A QMVLTLVEPQSSGIGGGAF+++ D ++ ++GRE AP+A TG++F DG F+E V G S GVPG L+ML+ AH E G AW++LF PAITL+EEGF VS RL TS+A D L + + + YY Sbjct: 31 PEVGSGFEEKPGWAADSFAVAAANPLATDAGYQVLKAGGNAIDAAVAVQMVLTLVEPQSSGIGGGAFLMHFDGA--DVQAYDGRETAPAAVTGELFMEDGEPLPFMEAVASGLSVGVPGTLRMLEQAHAEHGQLAWQELFTPAITLAEEGFAVSQRLHTSLANDEYLRENDLAQAFYY 206
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: A0A2A3XG14_9GAMM (Glutathione hydrolase proenzyme n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XG14_9GAMM) HSP 1 Score: 190 bits (482), Expect = 1.700e-53 Identity = 100/184 (54.35%), Postives = 125/184 (67.93%), Query Frame = 1 Query: 112 EIDQANPECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 E +PE SG+EEK A+ + NPLATDA Y +LK GGNAIDAAIA QMVL LVEPQSSGIGGGAF++Y+D +I ++GRE AP TG++F DG +F++ V G S GVPG L+ML+ AH E G AWE+LF PAITL+EEGF VS+RL T++A D L + A+ YY Sbjct: 26 EAPSISPEVESGYEEKPGWSADSFAVAAANPLATDAGYQILKAGGNAIDAAIAVQMVLNLVEPQSSGIGGGAFLMYYDGA--DIRAYDGRETAPQGVTGELFMEDGEPIAFMDAVASGLSVGVPGTLRMLEKAHAEHGELAWEELFKPAITLAEEGFAVSNRLHTTLASDEYLRQDALASQFYY 207
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: A0A1U9R989_9GAMM (Glutathione hydrolase proenzyme n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9R989_9GAMM) HSP 1 Score: 189 bits (480), Expect = 3.590e-53 Identity = 99/178 (55.62%), Postives = 123/178 (69.10%), Query Frame = 1 Query: 130 PECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 PE SG+EEK A+ + NPLATDA Y VLK GGNAIDAA+A QMVLTLVEPQSSGIGGGAF++++D + + +GRE AP+AATG++F DG +F++ V G S GVPG LKML+ AH E G +WE LF+PAI L+EEGF VS RL TS+A D L + + YY Sbjct: 37 PEVGSGYEEKPGWAASSFAVAAANPLATDAGYQVLKAGGNAIDAAVAVQMVLTLVEPQSSGIGGGAFLMHYDGSNVQAY--DGRETAPAAATGELFLEDGEPLAFMDAVASGLSVGVPGTLKMLEKAHAEHGQLSWEVLFEPAIVLAEEGFAVSQRLHTSLANDEALRHDPLASAFYY 212
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: A0A3D4KMH0_HALSX (Glutathione hydrolase proenzyme n=5 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A3D4KMH0_HALSX) HSP 1 Score: 188 bits (477), Expect = 9.050e-53 Identity = 107/214 (50.00%), Postives = 133/214 (62.15%), Query Frame = 1 Query: 22 KIFLATSITIVLTACSGGGSSDNDDVTVDCEIDQANPECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 +I LA S +++ S G S + +T PE SG+EEK A + NPLATDA Y VL NGGNAIDAAIA QMVLTLVEPQSSGIGGGAF++++D + + +GRE AP A TG++F +G F + V G S GVPG ++ML+ AH E G AWE LF+PAITL+EEGF VS RL TS+A D L + S YY Sbjct: 5 RIKLALSGLLLVPVYSFGFSYETPSIT---------PEVGSGYEEKPGWEAESFAVAAANPLATDAGYQVLANGGNAIDAAIAVQMVLTLVEPQSSGIGGGAFLMFYDGSNVQAY--DGRETAPGAVTGELFMENGEPLPFADAVASGLSVGVPGTVRMLEQAHKEHGQLAWEALFEPAITLAEEGFAVSQRLHTSLANDEALRSDPLAESFYY 207
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: A0A433KT28_9GAMM (Glutathione hydrolase proenzyme n=3 Tax=Halomonas TaxID=2745 RepID=A0A433KT28_9GAMM) HSP 1 Score: 186 bits (473), Expect = 3.390e-52 Identity = 98/184 (53.26%), Postives = 126/184 (68.48%), Query Frame = 1 Query: 112 EIDQANPECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 E+ PE SGFEEK A+ + NPLATDA Y VLK GGNAIDAA+A QMVL LVEPQSSGIGGGAF++++D +++ ++GRE AP+AATG++F +G F + V G S GVPG ++ML+MAH E G +W+ L PAITL+EEGF VS RL TS+A D+ L + A+ YY Sbjct: 25 EVPSITPEVGSGFEEKPGWEASTFAVAAANPLATDAGYQVLKAGGNAIDAAVAVQMVLALVEPQSSGIGGGAFLMHYDG--RDVQAYDGRETAPAAATGELFTENGEPLDFADAVASGLSVGVPGTVRMLEMAHAEHGLLSWKSLLMPAITLAEEGFAVSQRLHTSLANDTALRENALASDFYY 206
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: UPI00178893EB (gamma-glutamyltransferase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=UPI00178893EB) HSP 1 Score: 186 bits (473), Expect = 3.440e-52 Identity = 98/184 (53.26%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 112 EIDQANPECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 E PE SG+EEK A + NPLATDA Y VL NGGNA+DAAIA QMVLTLVEPQSSGIGGGAF++++D ++ ++GRE AP+A TG++F DG F++ V G S GVPG ++ML+ AH E G AWE+LF PAITL+EEGF VS RL TS+ D L + YY Sbjct: 26 ETPSVTPEVGSGYEEKPGWSAASFAVAAANPLATDAGYQVLANGGNAVDAAIAVQMVLTLVEPQSSGIGGGAFLMHYDGS--DVQAYDGRETAPAAVTGELFMQDGEPLPFMDAVASGLSVGVPGTVRMLEQAHKEHGQLAWEELFVPAITLAEEGFAVSQRLHTSLTSDEALKNDPLAGQFYY 207
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: A0A7C9NRZ7_9GAMM (Glutathione hydrolase proenzyme n=2 Tax=Halomonas TaxID=2745 RepID=A0A7C9NRZ7_9GAMM) HSP 1 Score: 186 bits (472), Expect = 4.730e-52 Identity = 105/216 (48.61%), Postives = 139/216 (64.35%), Query Frame = 1 Query: 16 LTKIFLATSITIVLTACSGGGSSDNDDVTVDCEIDQANPECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 L K FL+ + +++ S G S + VT PE SGFEEK A+ + NPLATDA Y VLK GGNAIDAA+A QMVLTLVEPQSSGIGGGAF++++D ++ ++GRE AP AA+G++F +G +F++ V G S GVPG L+ML+M H E G W+DLF PAITL+E+GF VS RL TS+A ++ L + + YY Sbjct: 2 LPKRFLSLTGLMLVPLYSWGFSYEAPSVT---------PEVGSGFEEKPGWAASSFAVAAANPLATDAGYQVLKAGGNAIDAAVAVQMVLTLVEPQSSGIGGGAFLMHYDGT--DVQAYDGRETAPQAASGELFIENGEPLAFMDAVASGLSVGVPGTLRMLEMVHAEHGQLPWKDLFTPAITLAEQGFSVSQRLHTSLASETALREDELASVFYY 206
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Match: UPI001CC72F8F (gamma-glutamyltransferase n=1 Tax=Halomonas aquamarina TaxID=77097 RepID=UPI001CC72F8F) HSP 1 Score: 186 bits (472), Expect = 4.810e-52 Identity = 97/184 (52.72%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 112 EIDQANPECASGFEEKEADIANEYIAVTNNPLATDAAYDVLKNGGNAIDAAIAAQMVLTLVEPQSSGIGGGAFMLYHDAETKEIFHFEGREAAPSAATGDMFFVDGVATSFIERVIGGKSTGVPGVLKMLKMAHDELGTTAWEDLFDPAITLSEEGFEVSDRLATSIAGDSILCKGAVHPSGYY 663 E PE SG+EEK + NPLATDA Y VLK GGNA+DAAIA QMVLTLVEPQSSGIGGGAF+L++D ++ ++GRE AP+ ATG++F DG +F+E V G S GVPG ++ML+ AH E G W +LF PAITL+EEGFE+S RL TS+A D L + Y+ Sbjct: 26 EAPSVTPEVGSGYEEKPGWATESFAVAAANPLATDAGYQVLKAGGNAVDAAIAVQMVLTLVEPQSSGIGGGAFLLHYDGA--DVQAYDGRETAPAGATGELFMEDGEPLTFMEAVASGLSVGVPGTVRMLEQAHREHGKLDWSELFVPAITLAEEGFEISQRLHTSLASDQALASDPLAGKFYF 207 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100923.174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100923.174.1 >prot_P-canaliculata_contig100923.174.1 ID=prot_P-canaliculata_contig100923.174.1|Name=mRNA_P-canaliculata_contig100923.174.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=221bp MKKKLTKIFLATSITIVLTACSGGGSSDNDDVTVDCEIDQANPECASGFEback to top mRNA from alignment at P-canaliculata_contig100923:354..1019+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig100923.174.1 ID=mRNA_P-canaliculata_contig100923.174.1|Name=mRNA_P-canaliculata_contig100923.174.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=666bp|location=Sequence derived from alignment at P-canaliculata_contig100923:354..1019+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100923:354..1019+ >mRNA_P-canaliculata_contig100923.174.1 ID=mRNA_P-canaliculata_contig100923.174.1|Name=mRNA_P-canaliculata_contig100923.174.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1326bp|location=Sequence derived from alignment at P-canaliculata_contig100923:354..1019+ (Pelvetia canaliculata dioecious)back to top |