Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 357 |
| Cds size | 351 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815582.0744023-UTR-P-canaliculata_contig100844:47..53 | 1622815582.0744023-UTR-P-canaliculata_contig100844:47..53 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100844 48..53 + |
| 1693494149.5585067-UTR-P-canaliculata_contig100844:47..53 | 1693494149.5585067-UTR-P-canaliculata_contig100844:47..53 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100844 48..53 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815582.0898397-CDS-P-canaliculata_contig100844:53..404 | 1622815582.0898397-CDS-P-canaliculata_contig100844:53..404 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100844 54..404 + |
| 1693494149.571204-CDS-P-canaliculata_contig100844:53..404 | 1693494149.571204-CDS-P-canaliculata_contig100844:53..404 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100844 54..404 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100844.162.1 >prot_P-canaliculata_contig100844.162.1 ID=prot_P-canaliculata_contig100844.162.1|Name=mRNA_P-canaliculata_contig100844.162.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=117bp
MLRARQALAQSDLTQAESLLKEAAALPANFDELGDSPATIQALVDRQNQL
VGMAEGQHPDYNAGAASFFLVQAEALLYYQDFDGAETLIKHARSFNVQFN
DKIGDPDRLEKLLEISR back to topmRNA from alignment at P-canaliculata_contig100844:48..404+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100844.162.1 ID=mRNA_P-canaliculata_contig100844.162.1|Name=mRNA_P-canaliculata_contig100844.162.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=357bp|location=Sequence derived from alignment at P-canaliculata_contig100844:48..404+ (Pelvetia canaliculata dioecious)
CAAGTGATGTTGCGAGCCCGACAGGCGCTGGCACAAAGTGACTTGACGCA
GGCAGAAAGTCTGCTCAAAGAAGCCGCTGCGTTGCCAGCGAACTTCGATG
AATTGGGCGATTCGCCCGCGACAATTCAAGCACTGGTCGATCGCCAAAAC
CAATTGGTTGGAATGGCCGAAGGTCAGCATCCGGATTACAACGCCGGCGC
AGCATCGTTCTTTTTAGTGCAAGCAGAAGCTCTGCTGTACTACCAAGACT
TCGATGGAGCAGAAACGTTGATCAAACATGCGCGTTCTTTCAACGTGCAA
TTCAATGACAAAATCGGCGATCCTGATCGCCTTGAGAAGTTGTTGGAAAT
CAGCCGC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100844:48..404+ >mRNA_P-canaliculata_contig100844.162.1 ID=mRNA_P-canaliculata_contig100844.162.1|Name=mRNA_P-canaliculata_contig100844.162.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=702bp|location=Sequence derived from alignment at P-canaliculata_contig100844:48..404+ (Pelvetia canaliculata dioecious)
ATGTTGCGAGCCCGACAGGCGCTGGCACAAAGTGACTTGACGCAGGCAGA
AAGTCTGCTCAAAGAAGCCGCTGCGTTGCCAGCGAACTTCGATGAATTGG
GCGATTCGCCCGCGACAATTCAAGCACTGGTCGATCGCCAAAACCAATTG
GTTGGAATGGCCGAAGGTCAGCATCCGGATTACAACGCCGGCGCAGCATC
GTTCTTTTTAGTGCAAGCAGAAGCTCTGCTGTACTACCAAGACTTCGATG
GAGCAGAAACGTTGATCAAACATGCGCGTTCTTTCAACGTGCAATTCAAT
GACAAAATCGGCGATCCTGATCGCCTTGAGAAGTTGTTGGAAATCAGCCG
CATGTTGCGAGCCCGACAGGCGCTGGCACAAAGTGACTTGACGCAGGCAG
AAAGTCTGCTCAAAGAAGCCGCTGCGTTGCCAGCGAACTTCGATGAATTG
GGCGATTCGCCCGCGACAATTCAAGCACTGGTCGATCGCCAAAACCAATT
GGTTGGAATGGCCGAAGGTCAGCATCCGGATTACAACGCCGGCGCAGCAT
CGTTCTTTTTAGTGCAAGCAGAAGCTCTGCTGTACTACCAAGACTTCGAT
GGAGCAGAAACGTTGATCAAACATGCGCGTTCTTTCAACGTGCAATTCAA
TGACAAAATCGGCGATCCTGATCGCCTTGAGAAGTTGTTGGAAATCAGCC
GC back to top
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