mRNA_P-canaliculata_contig1008.155.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: D8LD78_ECTSI (Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD78_ECTSI) HSP 1 Score: 141 bits (355), Expect = 1.960e-39 Identity = 64/82 (78.05%), Postives = 74/82 (90.24%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELFLS+ EERLYVGKRKGFIKLAM+TG+EVIPCYYFGNT LEI+RHP+LTS+SRKLG S+T+LWGRWGLP+PMP K M Sbjct: 181 IAELFLSNPAEERLYVGKRKGFIKLAMQTGSEVIPCYYFGNTTCLEILRHPVLTSVSRKLGASITILWGRWGLPIPMPGKSM 262
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A835YX01_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX01_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.500e-28 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELFLS EERL++ KR GF+KLAM+TG++VIP Y FGNT L + R L +LSR LGVS+TLLWGRWGLP+PMPRK+M Sbjct: 202 MAELFLSHPSEERLFIAKRTGFLKLAMQTGSDVIPWYLFGNTSTLVVARGSFLMALSRTLGVSITLLWGRWGLPLPMPRKIM 283
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A7S2K2P5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2P5_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.140e-26 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELF SS EERLY+ KRKGFIKLA+R G EV P Y+FGNT AL I++ +LT LSRKL +S+T++WGR+GLP+P K+M Sbjct: 18 MAELFQSSRDEERLYLSKRKGFIKLALREGVEVCPVYFFGNTSALSILKGSLLTYLSRKLQISVTIIWGRFGLPIPRDDKIM 99
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A7S4FD25_CHRCT (Acyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FD25_CHRCT) HSP 1 Score: 108 bits (270), Expect = 1.740e-26 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELF SS+ E +Y+ KRKGFIKLA+RTG +VIP Y+FGNT L +++ L +LSRKLGVS+TL WGRWGLPVP P K++ Sbjct: 231 IAELFASSSQREAVYLNKRKGFIKLALRTGGDVIPAYFFGNTTVLSVLKAGPLAALSRKLGVSVTLFWGRWGLPVPKPVKLV 312
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A7S2W5Y2_9STRA (Acyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5Y2_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.970e-24 Identity = 46/82 (56.10%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELFL S EE++ RKGFIK+AM+ G +++P Y GNT L++VRHPIL+ +SRKLG ++TL WGRWGLP+P+PR V+ Sbjct: 210 IAELFLCSPTEEKVLA--RKGFIKVAMQAGADIVPVYLLGNTTVLQVVRHPILSFISRKLGATITLFWGRWGLPLPLPRPVV 289
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A7S0AX97_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AX97_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.280e-23 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELF S EERLY+ KRKGFIK+A+R G +++PC+ FGNTV L +++H L +LSRKLG S+T +WG+ LP+P +M Sbjct: 11 IAELFKSCLEEERLYLSKRKGFIKIALREGADILPCFMFGNTVVLSVLKHGPLANLSRKLGASVTYMWGKAYLPIPRDEMLM 92
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A7S1GMT6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMT6_CYCTE) HSP 1 Score: 95.9 bits (237), Expect = 3.850e-23 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELF SS EERL++ KRKGFIKLA+R G ++ P Y FGNT AL I ++ L SLSR LGV+LT WG+W LP+P K++ Sbjct: 45 IAELFKSSRTEERLFLSKRKGFIKLALREGVDICPAYLFGNTSALTIFKYGPLASLSRSLGVALTYFWGKWYLPIPCDDKML 126
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A7S1VDB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VDB6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.330e-23 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 L ELF SS EER+++ KRKGFIKLA+R G +++P Y FGNT L + RH L SLSR LGV+LT WG+W LP+P ++ Sbjct: 191 LAELFRSSPTEERVFLSKRKGFIKLALREGVDIVPVYLFGNTTVLTVFRHGPLASLSRNLGVALTYFWGKWYLPIPRDEPLL 272
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A7R9YEL6_9STRA (Acyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEL6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.960e-22 Identity = 42/82 (51.22%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELFL + EE+L++ +RKGFIKLA+R+ EV+P + FGNT L +HP+L LSR L +S+T +WGRWGLPVP+ ++++ Sbjct: 186 IAELFLCTPEEEKLFLMQRKGFIKLALRSNAEVVPVFLFGNTEVLHAFKHPVLEQLSRSLQMSMTWIWGRWGLPVPLQKQIV 267
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Match: A0A7S3TR42_9SPIT (Acyltransferase n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TR42_9SPIT) HSP 1 Score: 95.9 bits (237), Expect = 7.340e-22 Identity = 45/82 (54.88%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 1 LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHPILTSLSRKLGVSLTLLWGRWGLPVPMPRKVM 246 + ELF +S E Y+ +RKGFIKLAMRTG +V+P Y+FGNT L ++ L +LSRKLG+S+TL WG WGLP+P P K++ Sbjct: 203 IAELFETSAKRECCYLLQRKGFIKLAMRTGADVVPAYFFGNTAVLSVLSTGPLATLSRKLGMSVTLTWGLWGLPIPKPVKLI 284 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1008.155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1008.155.1 >prot_P-canaliculata_contig1008.155.1 ID=prot_P-canaliculata_contig1008.155.1|Name=mRNA_P-canaliculata_contig1008.155.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=82bp LQELFLSSTLEERLYVGKRKGFIKLAMRTGNEVIPCYYFGNTVALEIVRHback to top mRNA from alignment at P-canaliculata_contig1008:10077..11209+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig1008.155.1 ID=mRNA_P-canaliculata_contig1008.155.1|Name=mRNA_P-canaliculata_contig1008.155.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1133bp|location=Sequence derived from alignment at P-canaliculata_contig1008:10077..11209+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig1008:10077..11209+ >mRNA_P-canaliculata_contig1008.155.1 ID=mRNA_P-canaliculata_contig1008.155.1|Name=mRNA_P-canaliculata_contig1008.155.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=492bp|location=Sequence derived from alignment at P-canaliculata_contig1008:10077..11209+ (Pelvetia canaliculata dioecious)back to top |