mRNA_P-canaliculata_contig100580.122.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: UPI000423FC16 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000423FC16) HSP 1 Score: 556 bits (1433), Expect = 1.930e-194 Identity = 280/341 (82.11%), Postives = 318/341 (93.26%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAANFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023 EGD VRRGQRLYSIYTP+ IAAQKDYLAS+QIGNERRIASVRQRL SKGMQESL+ERLTETRE+IER+PVYAE++GVVT+LMVRDGDYLKPGDP+++LQAY+KVWVIASVPESDLP M IGKTA L FESAPDAA G++DYIYPTID KTRTA+VRISVDN+SGSLRPGAYADI+FEA+ ++TP+T+LSVPSQA+LRDSRGAHVILALG+GRF++RDI IGSS+ GRT+VLSGL+ G+RIVASGQFMLDSESNLREGFSKL+AP A FD +TPLSELPID +TLSQIDHMVD+ALYFHEALIDGYAIDPYFLDP LTLI+ L+ RF GSKL+PIL+ AET Sbjct: 153 EGDIVRRGQRLYSIYTPDLIAAQKDYLASVQIGNERRIASVRQRLKSKGMQESLIERLTETREVIERMPVYAETAGVVTELMVRDGDYLKPGDPVVKLQAYDKVWVIASVPESDLPSMTIGKTATLTFESAPDAATIGEVDYIYPTIDTKTRTAQVRISVDNSSGSLRPGAYADILFEAEPSETPSTKLSVPSQAVLRDSRGAHVILALGDGRFEARDIKIGSSVSGRTQVLSGLSAGDRIVASGQFMLDSESNLREGFSKLNAPMAEFDGSTPLSELPIDAATLSQIDHMVDTALYFHEALIDGYAIDPYFLDPALTLIDGLRIRFEGSKLAPILDSAET 493
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A8J3CSU2_9PROT (Uncharacterized protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CSU2_9PROT) HSP 1 Score: 538 bits (1387), Expect = 5.730e-187 Identity = 278/341 (81.52%), Postives = 306/341 (89.74%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTP-TTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAANFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAE 1020 EGD VRRGQRLYSIYTPE IAAQKDYLASLQIGN RRIASVRQRL+SKGMQ +LV+RLTETREL+E VP+YAES+GVVT LMVRDGDYLKPGD +++LQAY+KVWVIASVPESDLP M IG TA LKFESAPDAA++G +DYIYPTID+KTRTARVRISVDN SGSLRPGAYADI FEA ++TP TTQLSVPSQA+LRDSRGAHVI+ALGEGRF+ R I IG+SIGGRTEVL GL GERIVASGQFMLDSE+NLREG SKLS P + FD +T LS+LPIDG TLSQIDHMVD+ALYFHEALIDGY+IDP FLDPTLTLIENLK RF GS+L PIL+ AE Sbjct: 186 EGDIVRRGQRLYSIYTPELIAAQKDYLASLQIGNARRIASVRQRLLSKGMQTNLVDRLTETRELVETVPIYAESAGVVTALMVRDGDYLKPGDAVMELQAYDKVWVIASVPESDLPAMRIGNTAQLKFESAPDAARTGTVDYIYPTIDVKTRTARVRISVDNVSGSLRPGAYADITFEAGLSETPPTTQLSVPSQAVLRDSRGAHVIIALGEGRFEPRAIEIGTSIGGRTEVLLGLKSGERIVASGQFMLDSEANLREGLSKLSEPTSGFDSSTALSDLPIDGGTLSQIDHMVDTALYFHEALIDGYSIDPSFLDPTLTLIENLKIRFTGSRLMPILDAAE 526
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: UPI00036D76B3 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI00036D76B3) HSP 1 Score: 535 bits (1378), Expect = 1.280e-185 Identity = 269/341 (78.89%), Postives = 308/341 (90.32%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAANFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023 EGD VRRGQRLY IYTPE IAAQKDYLASLQIGN RRIASVRQRL SKGMQE L++RLT +RE+IER+PVYAES+GVVT+LMVRDGDYLKPGDP+++LQ+Y KVWVIASVPES+LP++ IG+ A+LKFESAPDA K+G +DYIYPTID TRTA+VRISV+NASGSLRPGAY DIVFE +T P++QL VPSQAILRDSRGAHVI+ALG+GRF+SR ITIGSSI GRTE+LSGL GERIV+SGQFMLDSES+LREG SKLSAPAANFD TPLS+LPIDG TLS+IDH+VD+ALYFHEA+IDGYAIDPYFLDPTL LI+ LK RF+GS+LSPIL+ + T Sbjct: 190 EGDIVRRGQRLYRIYTPELIAAQKDYLASLQIGNARRIASVRQRLKSKGMQEGLIDRLTTSREVIERMPVYAESAGVVTELMVRDGDYLKPGDPVMKLQSYTKVWVIASVPESELPQIQIGEAASLKFESAPDAPKTGTVDYIYPTIDSNTRTAKVRISVENASGSLRPGAYVDIVFETQQTDAPSSQLVVPSQAILRDSRGAHVIMALGDGRFESRHITIGSSIRGRTEILSGLTAGERIVSSGQFMLDSESSLREGLSKLSAPAANFDAATPLSQLPIDGQTLSEIDHIVDTALYFHEAIIDGYAIDPYFLDPTLALIDTLKDRFSGSRLSPILDASAT 530
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: C6XPA5_HIRBI (Efflux transporter, RND family, MFP subunit n=2 Tax=Hyphomonadaceae TaxID=69657 RepID=C6XPA5_HIRBI) HSP 1 Score: 413 bits (1062), Expect = 8.540e-138 Identity = 216/342 (63.16%), Postives = 262/342 (76.61%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023 EGD+VR G LY +Y+PE IAAQKDY+ASL IGNE RIA+VRQRL S GMQ ++ R++ETRE++ERVPVYAE+ G V +L VR+GDY+KPG PIL+LQ+Y VW+IAS+PE DL + G L F SAPDA+ +G++DYIYPTI+ KTRT VRI +DN+ G LRPGAYADI F+ T +L+VP++AILRDSRGAHVI+ALGEGRF R + IG S G TE+LSGL GE++VASGQFMLDSE NLREGFSKL AP A TPLS+LP+D +TL++IDH D ALYFHEAL D Y IDPYF+DP L L E L+ RFA +KL+ ILE AET Sbjct: 179 EGDTVRPGALLYRVYSPELIAAQKDYIASLAIGNENRIAAVRQRLRSIGMQNVIINRISETREVLERVPVYAEAGGTVDKLQVREGDYIKPGTPILKLQSYADVWIIASIPEQDLALIDTGMPVLLDFLSAPDASATGRVDYIYPTINSKTRTGDVRIEIDNSKGYLRPGAYADIRFDLGGD---TPRLAVPTEAILRDSRGAHVIMALGEGRFAGRAVRIGISANGLTEILSGLVSGEQVVASGQFMLDSEVNLREGFSKLQAPPAFAAGPETPLSQLPVDTTTLAEIDHFTDMALYFHEALTDRYKIDPYFVDPALRLGETLRTRFADTKLADILESAET 517
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A059E1C9_9PROT (RND transporter n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A059E1C9_9PROT) HSP 1 Score: 411 bits (1056), Expect = 2.160e-137 Identity = 217/342 (63.45%), Postives = 261/342 (76.32%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023 EGD+VR G LY +Y+PE IAAQKDY+ASL IGNE RIA+VRQRL S GMQ + + RL+ETRE++ERVPVYAE+ G V +L VR+GDY+KPG PILQLQ+Y VWVIAS+PE DL + G +L F SAPDAA +G++DYIYPTI+ +TRT VRI +DN+ G LRPGAYADI F+ T+L+VP++AILRDSRGAHVI+ALG+GRF R + G S G TE+LSGL GE++VASGQFMLDSE NLREGFSKL AP A TPLS+LP+D +TL++IDH D ALYFHEAL D Y IDPYF+DP L L E L+ RFA +KL ILE AET Sbjct: 142 EGDTVRPGALLYRVYSPELIAAQKDYVASLAIGNENRIAAVRQRLRSIGMQNAAISRLSETREVLERVPVYAEAGGTVDKLQVREGDYVKPGTPILQLQSYADVWVIASIPEQDLAFIDTGMPVSLDFPSAPDAAATGRVDYIYPTINSQTRTGDVRIEIDNSQGYLRPGAYADIRFDLGGE----TRLAVPTEAILRDSRGAHVIMALGDGRFAGRAVRTGVSANGLTEILSGLVPGEQVVASGQFMLDSEVNLREGFSKLQAPPAFAAGPDTPLSQLPVDATTLAEIDHFTDMALYFHEALTDRYKIDPYFVDPALGLGETLRTRFADTKLVGILEPAET 479
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A6L7XJV0_9PROT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6L7XJV0_9PROT) HSP 1 Score: 409 bits (1051), Expect = 3.220e-137 Identity = 213/341 (62.46%), Postives = 263/341 (77.13%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAANF-DETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAE 1020 EGDSVR G+ LY +Y+PE IAAQKDYLASLQIGNE RIA+VRQRL S GMQ + +ERLTETRE+IERVPVYAE++G V++L VR+GDY+KPG P+L+LQ+Y VWVIAS+PE++L + G L F SAP A G++DYIYPTID TRTA VRI VDN++G LRPGAYAD+ F D + +LSVPS+AILRDSRGAHVI++LG GRF R + G S GRT VL+GLA GE +V SGQFMLDSE +LR G ++L AP A TPLSELP+D +TL++IDH+VD ALYFHEAL+D Y IDPYF+DP L + ++LK RF ++L PI+E A+ Sbjct: 95 EGDSVRVGELLYRVYSPELIAAQKDYLASLQIGNENRIAAVRQRLRSVGMQPAAIERLTETREVIERVPVYAEATGTVSRLDVREGDYVKPGTPVLRLQSYADVWVIASIPEAELSSIEHGLAVFLSFPSAPQAPAEGRVDYIYPTIDPHTRTADVRIVVDNSAGHLRPGAYADVRFLLDAGKV---RLSVPSEAILRDSRGAHVIVSLGGGRFAGRAVDTGQSANGRTAVLTGLATGEEVVTSGQFMLDSEVSLRGGLARLEAPPAMLAGPDTPLSELPVDATTLAEIDHLVDMALYFHEALVDDYRIDPYFVDPALQISDSLKVRFGNTRLVPIIENAQ 432
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A3B9KYB9_9PROT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Hyphomonas atlantica TaxID=1280948 RepID=A0A3B9KYB9_9PROT) HSP 1 Score: 410 bits (1055), Expect = 3.250e-137 Identity = 216/342 (63.16%), Postives = 261/342 (76.32%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023 EGD+VR G LY +Y+P+ IAAQKDYL SL+IGNE RI++VRQRL S GMQ + V+RLT+ RE+IERVPVYAE+ G V +L VR+GDY+ PG PIL+LQ+Y+ VWV+AS+PE+DLP + G L F SAP+A G +DYIYPTID TRTA+VRI VDNA+G LRPGAYADI + + +LSVP++AILRDSRGAHVI+ALGEGRF R + G S GRTE+++GL GE++VASGQFMLDSE NLREGFSKL AP A TPLS+LP+D STL++IDH D ALYFHEAL D Y IDPYF+DP L L E L+ RFA +KL PILE ET Sbjct: 144 EGDTVRPGALLYRVYSPDLIAAQKDYLNSLEIGNETRISAVRQRLRSLGMQNAAVDRLTQNREVIERVPVYAEAGGTVAELQVREGDYVSPGTPILRLQSYSGVWVMASLPETDLPLIDTGMPVRLDFPSAPEAPAEGTVDYIYPTIDPATRTAQVRIEVDNAAGYLRPGAYADITMDLGGGE----RLSVPTEAILRDSRGAHVIVALGEGRFAGRAVRTGVSSNGRTEIIAGLTPGEQVVASGQFMLDSEVNLREGFSKLQAPPAIAAGPDTPLSQLPVDASTLAEIDHFTDMALYFHEALTDQYRIDPYFVDPALGLGETLRIRFADTKLVPILEDGET 481
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A2D7KHU3_9PROT (Efflux transporter periplasmic adaptor subunit n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D7KHU3_9PROT) HSP 1 Score: 410 bits (1053), Expect = 1.270e-136 Identity = 213/341 (62.46%), Postives = 260/341 (76.25%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAE 1020 EGD+VR G LY +Y+P+ IA QKD +ASL IGNE RIA+VRQRL S GM E V+RL ETRE++ER+PVYAE+ G V L VR+GDY++PG PIL+LQ+Y VWV+ASVPESDLP++ G LKF SAP+A G IDYIYPTID +TRTAR+RI VDNASG LRPGAYADI + + LSVP++AILRDSRGAHVI+ALGEGRF R + G S GRT+++ GL EGE +VASGQF+LDSE NLREG S+L +P+ TPLSELP+D +TL+QIDH D ALYFHEAL DGY IDPYF+DP L L ++L+ +FA +KL PI+E+AE Sbjct: 178 EGDTVRPGALLYRVYSPDLIATQKDLIASLTIGNEARIAAVRQRLRSLGMPERAVDRLVETREVVERIPVYAEAGGTVAALEVREGDYVRPGTPILRLQSYAGVWVMASVPESDLPRLDTGLPVQLKFPSAPEAPGEGVIDYIYPTIDPQTRTARMRIEVDNASGYLRPGAYADISMQLSSGEF----LSVPTEAILRDSRGAHVIVALGEGRFAGRAVRTGVSANGRTQIIEGLTEGEEVVASGQFLLDSEVNLREGLSRLQSPSTITAGPETPLSELPVDAATLAQIDHFTDMALYFHEALTDGYRIDPYFVDPALALGDSLRTQFADTKLVPIIEEAE 514
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A2D8ZUI8_9PROT (Efflux transporter periplasmic adaptor subunit n=2 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A2D8ZUI8_9PROT) HSP 1 Score: 409 bits (1051), Expect = 3.770e-136 Identity = 217/342 (63.45%), Postives = 259/342 (75.73%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAET 1023 EGDSVR G LY IY+PE IAAQKDY+A+L IGNE RIA+VRQRL S GMQ + ++RLTETRE+ ERVPVYAE+ G V L VR+GDY+KPG PIL+LQ+Y VWVIAS+PE DL + G +L F SAP A G++DYIYPTI+ KTRTA VRI +DN++G LRPGAYADI F+ T+L+VP++AILRDSRG HVI+ALG+GRF R + G S G TE+LSGLA GE++VASGQFMLDSE NLREGFSKL AP A TPLS+LP+D TL++IDH D ALYFHEA+ D Y IDPYF+DP L L E L+ RFAG+KL +LE AET Sbjct: 179 EGDSVRPGALLYRIYSPELIAAQKDYIAALTIGNENRIAAVRQRLRSIGMQNTTIDRLTETREVRERVPVYAEAGGTVDTLEVREGDYVKPGTPILRLQSYADVWVIASIPEQDLAFIDTGMPVSLDFPSAPKAPGEGRVDYIYPTINPKTRTADVRIEIDNSAGYLRPGAYADIGFDLGGE----TRLAVPTEAILRDSRGTHVIMALGDGRFAGRAVRTGVSANGLTEILSGLAPGEQVVASGQFMLDSEVNLREGFSKLQAPPAFTAGPDTPLSQLPVDAITLAEIDHFTDMALYFHEAMTDRYKIDPYFVDPALGLGEGLRSRFAGTKLIAVLEPAET 516
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Match: A0A259M236_9PROT (Efflux transporter periplasmic adaptor subunit n=2 Tax=unclassified Hyphomonas TaxID=2630699 RepID=A0A259M236_9PROT) HSP 1 Score: 405 bits (1041), Expect = 8.730e-135 Identity = 210/341 (61.58%), Postives = 258/341 (75.66%), Query Frame = 1 Query: 1 EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMQESLVERLTETRELIERVPVYAESSGVVTQLMVRDGDYLKPGDPILQLQAYNKVWVIASVPESDLPKMVIGKTAALKFESAPDAAKSGKIDYIYPTIDMKTRTARVRISVDNASGSLRPGAYADIVFEADKTQTPTTQLSVPSQAILRDSRGAHVILALGEGRFDSRDITIGSSIGGRTEVLSGLAEGERIVASGQFMLDSESNLREGFSKLSAPAA-NFDETTPLSELPIDGSTLSQIDHMVDSALYFHEALIDGYAIDPYFLDPTLTLIENLKGRFAGSKLSPILEKAE 1020 EGD+VR G LY +Y+P+ IAAQKD +ASL IGNE RIA+VRQRL S GM E + RL ETRE++ERVPVYAE+ G V L +R+GDY+KPG P+L+LQ+Y VWV+ASVPESDLP++ G L+F SAP+A G IDYIYPTID +TRTARVRI VDN +G LRPGAYADI + + +LSVP++AILRDSRGAHVI+ALG+GRF R + G S GRT+++ GL +GE +VASGQF+LDSE NLREG +KL P A TPLSELP+D +TL+QIDH D ALYFHEAL D Y IDPYF+DP L L E+L+ RFA +KL PI+++AE Sbjct: 180 EGDTVRPGALLYLVYSPDLIAAQKDLIASLSIGNETRIAAVRQRLRSLGMPERAIHRLVETREVMERVPVYAEAGGTVAALEIREGDYVKPGTPVLRLQSYAGVWVMASVPESDLPRLDTGLPVRLEFPSAPEAPGEGTIDYIYPTIDPQTRTARVRIEVDNTAGFLRPGAYADISMQLSGGE----RLSVPTEAILRDSRGAHVIVALGDGRFAGRAVRTGVSSNGRTQIVEGLTQGEEVVASGQFLLDSEVNLREGLAKLQTPVAITAGPDTPLSELPVDATTLAQIDHFTDMALYFHEALTDAYGIDPYFVDPALALGESLRRRFADTKLVPIIDEAE 516 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100580.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100580.122.1 >prot_P-canaliculata_contig100580.122.1 ID=prot_P-canaliculata_contig100580.122.1|Name=mRNA_P-canaliculata_contig100580.122.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=341bp EGDSVRRGQRLYSIYTPEPIAAQKDYLASLQIGNERRIASVRQRLISKGMback to top mRNA from alignment at P-canaliculata_contig100580:4..1026- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig100580.122.1 ID=mRNA_P-canaliculata_contig100580.122.1|Name=mRNA_P-canaliculata_contig100580.122.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1023bp|location=Sequence derived from alignment at P-canaliculata_contig100580:4..1026- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100580:4..1026- >mRNA_P-canaliculata_contig100580.122.1 ID=mRNA_P-canaliculata_contig100580.122.1|Name=mRNA_P-canaliculata_contig100580.122.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2046bp|location=Sequence derived from alignment at P-canaliculata_contig100580:4..1026- (Pelvetia canaliculata dioecious)back to top |