Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 306 |
| Cds size | 306 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815579.0741246-CDS-P-canaliculata_contig100534:9..315 | 1622815579.0741246-CDS-P-canaliculata_contig100534:9..315 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100534 10..315 + |
| 1693494148.150076-CDS-P-canaliculata_contig100534:9..315 | 1693494148.150076-CDS-P-canaliculata_contig100534:9..315 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100534 10..315 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100534.117.1 >prot_P-canaliculata_contig100534.117.1 ID=prot_P-canaliculata_contig100534.117.1|Name=mRNA_P-canaliculata_contig100534.117.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=102bp
HVSGTFLVNNGTRFETSDHDPKSLRFYLSAENGTTGEQVAFQGGAILEGF
VFAPNSELVVDNGTSIFGAVAANRLLMRGGAKLHQDKSLSTFSIGGDDDS
GV back to topmRNA from alignment at P-canaliculata_contig100534:10..315+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100534.117.1 ID=mRNA_P-canaliculata_contig100534.117.1|Name=mRNA_P-canaliculata_contig100534.117.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=306bp|location=Sequence derived from alignment at P-canaliculata_contig100534:10..315+ (Pelvetia canaliculata dioecious)
CACGTTAGCGGGACGTTCCTGGTGAACAACGGAACGCGCTTCGAGACGAG
TGATCACGACCCTAAGAGCCTGCGGTTCTATCTCAGCGCCGAGAACGGCA
CCACCGGGGAGCAGGTGGCCTTCCAAGGGGGCGCAATCCTCGAGGGCTTC
GTCTTTGCGCCAAATTCAGAGCTGGTGGTCGACAACGGCACCAGCATCTT
TGGTGCGGTGGCTGCGAACCGCCTCCTCATGCGCGGCGGGGCGAAGCTGC
ACCAGGACAAGAGCTTGAGCACCTTCTCCATCGGCGGAGACGACGACAGC
GGCGTG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100534:10..315+ >mRNA_P-canaliculata_contig100534.117.1 ID=mRNA_P-canaliculata_contig100534.117.1|Name=mRNA_P-canaliculata_contig100534.117.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at P-canaliculata_contig100534:10..315+ (Pelvetia canaliculata dioecious)
CACGTTAGCGGGACGTTCCTGGTGAACAACGGAACGCGCTTCGAGACGAG
TGATCACGACCCTAAGAGCCTGCGGTTCTATCTCAGCGCCGAGAACGGCA
CCACCGGGGAGCAGGTGGCCTTCCAAGGGGGCGCAATCCTCGAGGGCTTC
GTCTTTGCGCCAAATTCAGAGCTGGTGGTCGACAACGGCACCAGCATCTT
TGGTGCGGTGGCTGCGAACCGCCTCCTCATGCGCGGCGGGGCGAAGCTGC
ACCAGGACAAGAGCTTGAGCACCTTCTCCATCGGCGGAGACGACGACAGC
GGCGTGCACGTTAGCGGGACGTTCCTGGTGAACAACGGAACGCGCTTCGA
GACGAGTGATCACGACCCTAAGAGCCTGCGGTTCTATCTCAGCGCCGAGA
ACGGCACCACCGGGGAGCAGGTGGCCTTCCAAGGGGGCGCAATCCTCGAG
GGCTTCGTCTTTGCGCCAAATTCAGAGCTGGTGGTCGACAACGGCACCAG
CATCTTTGGTGCGGTGGCTGCGAACCGCCTCCTCATGCGCGGCGGGGCGA
AGCTGCACCAGGACAAGAGCTTGAGCACCTTCTCCATCGGCGGAGACGAC
GACAGCGGCGTG back to top
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