mRNA_P-canaliculata_contig10043.106.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: D7FR84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR84_ECTSI) HSP 1 Score: 545 bits (1405), Expect = 2.470e-184 Identity = 344/665 (51.73%), Postives = 414/665 (62.26%), Query Frame = 1 Query: 1 ILKGKTLPSDDDSLEVAGIVSKAKSSRGASGEAK---------FTQEKRLMLVGSTASEVQVVHKLREDMIVRNDLEGVTIPKGYKKVALNIPSDSPAHSPYRFERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQAG-RTLTSR------EPAGLPGNERGYILVKEAFEGGSGRLGGGSEALTHVFSAQQLAGKAAMLRLTPEEQEVEDCCGHSTVKENSAVAASQGAHKCEGELASAGNAAHGVEEEKGEMGGAEEGNPGGDHPMDAIEPTEMVLEEATTQEDMAA---EVMGGVTDPVRSNARRRGRAGGATVEAIGDSATGFPRPMDVTQEKDNAPSANDPP--------------------------APQQLLPLPSTASDSPLDELVAMGFARDAAHEALSISGGSIAEAASRLLSPGL-------SSVGVG----GGGNNPSDEGPRTS---------REVRVQQATEKIAGHNDHGKALKCLEVLEAMLRNILEHPAEEKFRRVRRSNGKFKTSVGSVAGGVELLLAAGFEVQGTDQLKLGRQDPGLIWLARTTVEGWRERL 1800 ILKGK L + +LE AG++ + + + A F Q+ +LMLVGS SEV+ V + ++ + VRNDL G PKGYKKVALN P SPYRFERIETLPGLP E+ AR+ILESLA DPGVR+VLEKH+WTVGALCEL PEGKVG+S +CV+GLN NHG KI LRLRTDDL+GFRKILSIRKVLFHELAHN+ S+HDDNFY LMRQVEREAAEL+W +Q+G RT+ R EPAGLPG G+ILVKEAFEGGSGRLGG S A T +FSA ++AG+AA+ RLTPEEQEVEDCCGH+ VAA + E LA A V E D D + P T D + GG R G + E GD + P+D + AP+ + A +L P P T S LDEL+AMGF R+AA EALS SGGSI +AA RLL+PG+ SS VG GGG S E R + R+VR+QQA +++AGH D +A++CL+VL A+LRNI+EHP E KFR+VRRSNGKFK SVG+VAGGV+LLLAAGFE +G DQL+LGRQDPGLIWLA++TVE W+ERL Sbjct: 44 ILKGKALRDEAGTLEAAGVLVPSPAQTATTTTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDRVRVRNDLNGQVTPKGYKKVALNYPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDKCVLGLNQNHGMKIFLRLRTDDLRGFRKILSIRKVLFHELAHNDISDHDDNFYMLMRQVEREAAELNWMQQSGGRTVAGRPPAPRAEPAGLPGGGEGFILVKEAFEGGSGRLGGDSNAFTKIFSAGEMAGQAAVQRLTPEEQEVEDCCGHTK-----GVAAGAAEVEKEERLAETNAMASSVSEMSVTS----------DDLDDGVAPALTSAAAGATSGDHGGTDGKTRGGEERQAERGQRLTGASEMNVAEEEGDGIS--VEPVDSPPLEAAAPTPLEXXXXXXXXXXXXXXXXXXXXXXXETLAAAATKLGPAPRTPESSSLDELLAMGFPREAAVEALSASGGSIPDAAYRLLTPGMMESGRNNSSEAVGMTAAGGGAQGSREAGRDTGSEGAVRLPRDVRLQQAADRVAGHADRARAVQCLDVLAAVLRNIMEHPEEAKFRKVRRSNGKFKASVGAVAGGVDLLLAAGFEERGDDQLELGRQDPGLIWLAKSTVEAWQERL 691
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: A0A836CEA9_9STRA (WLM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA9_9STRA) HSP 1 Score: 243 bits (619), Expect = 1.560e-67 Identity = 225/707 (31.82%), Postives = 315/707 (44.55%), Query Frame = 1 Query: 1 ILKGKTLPSDDDSLEVAGIVSKAKSSRGASGEAKFTQEKRLMLVGSTASEVQVVHKLREDMIVRNDLEGV-TIPKGYKKVALNIPSDSPA-HSPYRFERIETLPGLPNEDMAREILESLADDPG---------------------------VRSVLEKHKWTVGALCELRPEG----------------KVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQAGRTLTSREPA-----------GLPGNERGYILVKEAFEGGSGRLGGGSEALTHVFSAQQLAGKA-----AMLRLTPEEQEVEDCCGHSTVKENSAVA-----ASQGAHKC---------------EGELASAGNAAHGVEEEKGEMGGAE-EGNPGGDHPMDAIEPTEMVLEEATTQED---MAAEVMGGVTDPVRSNARRRGRAGGATVEAIGDSATGFPRPMDVTQEKDNAPSANDPPAPQQLLPLPSTASDSPLDELVAMGFARDAAHEALSISGGSIAEAASRLLSPGLSSVGVGGGGNNPSDEGPRTSREVRVQQATEKIAGHNDHGKALK----------------------CLEVLEAMLRNILEHPAEEKFRRVRRSNGKFKTSVGSVAGGVELLLAAGFEVQGTDQLKLGRQDPGLIWLARTTVEGWRERL 1800 + KGKTL DSLE G++ G AK LML+GSTA++V V + + VR+DL G +PKGY KV L + P SPY FER++ L GLP + A+ ILE LA D G VR+V+ KHKWTVG L EL PEG KVG+S C+MGLN N G I LR+RTDDL+GFRK LS+ KVL+HELAHN + +HD++FY LMRQ+EREA ELD+ + AGRT++ GY+LV+EAF GG+ RLGG S L V +A+++A +A A+LRLTPEE+EVE CG K +S A A+Q E A+ A G +GG+ P P + ++ + + E D M EV G + A A GA + + MDV + +P S+ L+EL++MGF AAH AL+ SGG +A L++L +M++ ++++P + +FRRVR +N + + ++ +++L AAG+E +G D+L L R D GL+W A++ ++ RE L Sbjct: 56 VWKGKTLKEPYDSLEETGVL--------VPGRAK------LMLIGSTAADVVAVSQPAPHVRVRDDLTGEEVVPKGYVKVPLGVGGTDPRDRSPYVFERVQALRGLPRQAEAQAILEELAADRGTCYNAXXXXXXXXXXXXXXXXXXXXXXVRAVMAKHKWTVGLLTELYPEGXXXXXXXXXXXXXXXXKVGVSETCLMGLNENRGQTIRLRVRTDDLQGFRKPLSMLKVLYHELAHNVYGDHDNDFYMLMRQIEREANELDFAQSAGRTVSGARSVHRAEXXXXXXXXXXXXSGGYVLVREAFAGGAQRLGGDSAGLARVLTAREMAAQARITSAALLRLTPEEEEVEHACGCHNAKPHSQTAPPVDVATQSVSTVITATPPPPPLSLPLLAAEDAALPMHASDAAGAAGALGGSNARQQPHSPGPREDLQMRDHMHGEGAGSADGDAMNVEVYGAAETAAVAPAAAAPDATGAFLSGVAS--------MDV----------------ETFVPPLSS-----LNELLSMGFEEAAAHRALADSGGDLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALDLLISMIQMVMDNPGQARFRRVRLANPRLQRTLLHSPAALQVLSAAGWERKG-DELVLTRDDVGLLWAAKSLLQAHREAL 718
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: W7TIG9_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIG9_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.620e-66 Identity = 207/598 (34.62%), Postives = 290/598 (48.49%), Query Frame = 1 Query: 118 RLMLVGSTASEVQVVHKLR---EDMIVRNDLEGVTIPKGYKKVALNIPSDSPAHSPYRFERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVERE--AAELDWRRQAGRTLTSREPAGLPGNERGYILVKEAFEGGSGRLGGGSEALTHVFSAQQLAGKAAMLRLTPEEQEVEDCCGHST---------VKENSAVAASQGAHKCEGELASAGNAAHGVEEEKGEMGGAEEGNPGGDHPMDAIEPTEMVLEEATTQEDMAAEVMGGVT-DPVRSNARRR-GRAGGATVEAIGDSATGFPRPMDVTQEKDNAPSANDPPAPQQLLPLPSTASDSPLDELVAMGFARDAAHEALSISGGSIAEAASRLLS---------PGLSSVGVGGGGNNPSDEGPRT-------------SREVRVQQATEKIAGHNDHGKALKCLEVLEAMLRNILEHPAEEKFRRVRRSNGKFKTSVGSVAGGVELLLAAGF-EVQGTDQLKLGRQDPGLIWLARTTVEGWRE 1794 +L+L+G+T + + + + ++ + NDL G + G K + P P Y F+ IE LP LP++DMAR IL LA DPGV V+E++KW+VGALCE+ PEG VG+S+ CVMGLN N G +I LRLRTDDL G+RK LS+RKVLFHELAHN + HD F+ LMR +ER+ A R G E G+PG FEGGSGRLGG + SA+ +AG AA+ RL+ EEQ ++D CG V S + + L + +AAH EEKGE + +P D + + P E T + + T P++ + G G ++++ + +SA F S+ D D +L+ +GF EAL + G + AA LL G + VG N SD PR SR+ RV +A +++A G L++ML+ +LEHP E KFRRVR +N KF+ +VG ++LL GF E +G L+ R DPGL+W + VE +E Sbjct: 79 KLVLIGTTTASLAALAEAPARLNNIRIINDLGG-NMSGGIKISTVAAPVLRPRK--YGFQSIEVLPHLPDQDMARRILTDLASDPGVLLVMERYKWSVGALCEMYPEGLVGVSSVCVMGLNENKGQRIFLRLRTDDLLGWRKALSVRKVLFHELAHNVHAAHDQPFHLLMRNIERDVNAFNSSGRAVGGALHLPAEGGGMPGG---------LFEGGSGRLGGRGAST----SARVMAGLAAIQRLSKEEQAIDDACGSGRQSGTMGLTGVTRPSERDSDNPNRSIKATLQAQEDAAH--TEEKGEK---DSKSP--DSELVTVLPAEDPSRSGRTASGPGYDQLPSPTPSPLKPSVPENPGSLGDSSLDEMRESALHF------HSHSAGCCSSTD-------------RMDEAAAQLMGLGFGEAQVLEALHLYDGDLMRAADYLLELAAREERAGEGEGQI-VGASSANLSDPSPRPPAAAIDTPTIPSDSRQARVMEAAQRLAREASEGSNA-AFATLQSMLQALLEHPQELKFRRVRLNNAKFQRTVGRFPAAIDLLRDVGFQEREGGTVLEYTRGDPGLLWWGKCVVEQAKE 632
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: A0A7R9VR13_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VR13_9STRA) HSP 1 Score: 226 bits (577), Expect = 5.300e-65 Identity = 139/307 (45.28%), Postives = 185/307 (60.26%), Query Frame = 1 Query: 7 KGKTLPSDDDSLEVAGIVSKAKSSRGASGEAKFTQEKRLMLVGSTASEVQVVHKLREDMI-----VRNDLEGV-------TIPKGYKKVALNIPSDSPAHSP--YRFERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQAGRTL---TSREPAGLPGNERGYILVKEAFEGGSGRLGGGSEALTHVFSAQQLAGKAAMLRLTPEEQEVEDCCG 876 KG+ L +DD L + + G K + RLM G++ +E++ + E+ + VR+DL V G + +A A +P Y F IETLP LP+E A+EIL SLA+DPG+ + + KH+W VG L E+ PEGKVG CVMGLN N G KILLRLRTDDLKGFRKILSIRKVLFHELAHN S+HD +F+ LMRQ+E+E E+DW + +G T+ S E +G+ G FEGG+ RLGG S+ L+H A+ LA +AA++RLT EE+E++ CCG Sbjct: 57 KGRVLANDDAELYDLVVPN---------GGKKPPKVVRLMATGASEAEIKERDRSFEEGLRAAPRVRDDLTAVGRADLARRREAGQRTLAQAAARSRAAKAPPQYSFGHIETLPNLPDEKKAKEILTSLANDPGILACMAKHRWNVGCLAEMFPEGKVGQDEVCVMGLNQNKGQKILLRLRTDDLKGFRKILSIRKVLFHELAHNVHSDHDGDFFLLMRQIEKECNEMDWTQGSGSTIGGVVSHEGSGV-----GMAGHSTKFEGGTHRLGGDSDFLSHSLPARDLAARAAIMRLTAEEEEIQQCCG 349
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: A0A7S4N2I3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N2I3_9STRA) HSP 1 Score: 212 bits (539), Expect = 2.340e-59 Identity = 132/308 (42.86%), Postives = 174/308 (56.49%), Query Frame = 1 Query: 7 KGKTLPSDDDSLEVAGIVSKAKSSRGASGEAKFTQEKRLMLVGSTASEVQV-----------VHKLREDMIVRNDLEGVTIPKGYKKVALNIPSDSPAHSP-------YRFERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQAGRTLTSREPAGLPGNERGYILVKEAFEGGSGRLGGGSEALTHVFSAQQLAGKAAMLRLTPEEQEVEDCCG 876 KG+ L DD +L +V SG + + RLM G++ +EV+ ++R+D I + + G + + AL + + A + Y F IE P LP D AREIL SLA+DPG+ + + KHKW VG L E+ P+G VG CVMGLN N G KILLRLRTDDLKGFRK LSIRKVLFHELAHN S+H+ +F+ LMRQ+E+E E+DW+R +G T T E FEGG+ RLGG S L+H A+ LA +AA++RLT EE+E+ CG Sbjct: 60 KGRVLSEDDANLYELLVVGPNVGGVKKSGSTR-RRTVRLMATGASTAEVEARDRAFEEGARAAPRIRDD-ISQGGITGAARRREEGQRALEMAAARSARTANGGGSLRYGFGAIEIFPNLPERDKAREILTSLANDPGILACMAKHKWNVGCLAEMFPKGYVGQDEVCVMGLNQNKGQKILLRLRTDDLKGFRKNLSIRKVLFHELAHNVHSDHNGDFFLLMRQIEKECNEMDWKRGSGSTTTGTVGCQHAVEENSVATSSRRFEGGTRRLGGDSLGLSHQIPARDLAARAAVMRLTVEEEEIRRGCG 365
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: A0A7S4RIJ1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RIJ1_9STRA) HSP 1 Score: 210 bits (534), Expect = 3.370e-58 Identity = 112/200 (56.00%), Postives = 140/200 (70.00%), Query Frame = 1 Query: 283 FERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQAGRTLTSREPAGLPGNERGYILVKEAFEGGSGRLGGGSEALT--HVFSAQQLAGKAAMLRLTPEEQEVEDCCG 876 F +IETLP LPNE AR+ILE+LA+D GV + + KH+W VG L EL PEGKVG + CVMGLN N G KILLR+RTDDLKGFRK+LSIRKVLFHELAHN SEHD+ F+QLMRQ+ERE +LDW R G T+ S ++ + ++GG+ RLGG S H ++LA +AAM+RLT EE+E++ CG Sbjct: 187 FGKIETLPNLPNEKKARDILETLANDRGVLACMAKHRWNVGCLAELYPEGKVGETDVCVMGLNQNKGQKILLRIRTDDLKGFRKMLSIRKVLFHELAHNVHSEHDEQFFQLMRQIERECNDLDWTRSQGNTIGSGGVGSSYADDH-ELNSDGLYQGGTYRLGGDSNESENRHHMPVRELAARAAMMRLTAEEEEIQKHCG 385
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: A0A7S3LEW3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEW3_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.380e-56 Identity = 119/239 (49.79%), Postives = 154/239 (64.44%), Query Frame = 1 Query: 166 KLREDMIVRNDLEGVTIPKGYKKVALNIPSDSPAHSPYRFERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQAGRTLTSREPAGLPGNERGYILVKEAFEGGSGRLGGGSE--ALTHVFSAQQLAGKAAMLRLTPEEQEVEDCCG 876 K R++M R L + K Y + N+ S + Y F IETLP LP+ + A+ ILE+LA+DPG+++ + KH W VGAL EL PEGKVG S CVMGLN N G +ILLR+RTDDL+GFRK+LSIRKVLFHELAHN SEH+ F+QLMRQ+E E LDW + AG T S E G +EGG+ RLGG A T+ S ++LA +AA+ R+T EE+E+++ CG Sbjct: 122 KGRKEMERRKRLGRQMMTKIYTRKG-NVAGSS-GYGDYGFGTIETLPNLPHREKAQRILETLANDPGIQACMAKHNWKVGALAELYPEGKVGESEVCVMGLNQNKGMRILLRVRTDDLRGFRKMLSIRKVLFHELAHNVHSEHNGKFFQLMRQIEAECNSLDWTKGAGLTDMSNEDGGT-------------YEGGTFRLGGDKNQAAPTNNLSTRELAAQAALRRMTLEEEEIQNNCG 345
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: A0A7S3XML3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XML3_HETAK) HSP 1 Score: 194 bits (492), Expect = 9.870e-56 Identity = 92/128 (71.88%), Postives = 106/128 (82.81%), Query Frame = 1 Query: 271 SPYRFERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDW 654 SPYRF RIETLPGLP +D AR ILE LA+D G+ V+EKH+W VGALCEL PEG+VG+S CV+GLN N G KILLRLRTDDL+GFRK L +KVL+HELAH +HDD+FYQLMRQ+EREAAELDW Sbjct: 2 SPYRFGRIETLPGLPGQDEARSILEQLANDRGILKVMEKHRWQVGALCELYPEGRVGVSEVCVLGLNQNRGQKILLRLRTDDLRGFRKYLGTKKVLYHELAHMVHDDHDDDFYQLMRQIEREAAELDW 129
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: A0A7S1G5Y2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5Y2_9STRA) HSP 1 Score: 197 bits (502), Expect = 5.160e-55 Identity = 122/254 (48.03%), Postives = 157/254 (61.81%), Query Frame = 1 Query: 271 SPYRFERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQAGRTLTSREPAGLPGNERGYILVKEAFEGGSGRLGGGSEALTHVFSAQQLAGKAAMLRLTPEEQEVEDCC--GHSTVKENSAVAASQGAHKCEGELASAGNAAHGVEEEKGEMGGAEEGNPGG 1026 SP RF I+ LPGLP E+ AR +L +LA+DPGV +V+ KH W V L EL P GKVG+S C+MGLN N G +ILLR+RTDDL+GFR + I++VL+HELAHN EHD +F+ L R +ERE AELDW +Q GR L + LP G F GG+GRLGG +E + +FSA++LA AA+LRL+ EQEV C S ++ VAAS+ A + L A E GE+ G +G GG Sbjct: 43 SPMRFGEIKPLPGLPMEEEARALLTALAEDPGVVAVMTKHGWHVPVLSELYPRGKVGVSETCLMGLNRNAGQEILLRIRTDDLQGFRPMRKIKEVLWHELAHNVHGEHDKDFFALNRVLEREGAELDWTQQGGRRLGGAQMF-LPAGGVGAAHDDAPFAGGTGRLGGDAEVAS-MFSARELAASAAVLRLSEAEQEVTSLCVTTPSAADADAEVAASEAAARAAVALRRA---------ESGEVAGVADGGDGG 285
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Match: A0A7R9WVU5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVU5_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.710e-54 Identity = 137/325 (42.15%), Postives = 190/325 (58.46%), Query Frame = 1 Query: 1 ILKGKTLPSDDDSLEVAGIVSKAKSSRGASGEAKFTQEKRLMLVGSTASEVQVVHKLREDM-------IVRNDLEGVTIPKGYKKV-----ALNIPSDSPAHSPYRFERIETLPGLPNEDMAREILESLADDPGVRSVLEKHKWTVGALCELRPEGKVGISAQCVMGLNVNHGAKILLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQAGRTLTSREPAGLPGNERGYILVKE-AFEGGSGRLGGGSE------ALTHVF------SAQQLAGKAAMLRLTPEEQ-EVEDCCGHSTVKEN 897 +LKGK L + +D L ++ A+ S+ +KR + +TA+ +L++ M VR+DL K +++ AL + +P+ SPY F I+ LP LP++D AR IL LA+DPGV + + +HKW VG+L EL P+GKVG SA CVMGLN N G +ILLRLRTDDLKGFRK+LSIRKVLFHELAHN SEHD F+QLMRQ+E+E E+DW + +GL + G I +FEGG+ RLG S+ A +H S ++LA +AA+ R++ +E E+ED CG +E+ Sbjct: 56 VLKGKVLSNANDRLRE--LICAAECSQA--------PKKRKYTLLATATSSSTKQRLQQQMEVASKSRTVRDDLTTAGQAKEHRRKMQGRRALRNTARTPS-SPYGFGSIDVLPNLPHQDTARGILTQLANDPGVLACMAQHKWKVGSLAELYPDGKVGQSAVCVMGLNKNQGQQILLRLRTDDLKGFRKMLSIRKVLFHELAHNVHSEHDSKFFQLMRQIEKECNEMDWT----------QGSGLSAFDGGNIADDSLSFEGGTYRLGSSSDVDSGHRATSHSSFRSQSSSHRELAARAALSRMSVQEMTEIEDGCGCGLERED 359 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10043.106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10043.106.1 >prot_P-canaliculata_contig10043.106.1 ID=prot_P-canaliculata_contig10043.106.1|Name=mRNA_P-canaliculata_contig10043.106.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=603bp ILKGKTLPSDDDSLEVAGIVSKAKSSRGASGEAKFTQEKRLMLVGSTASEback to top mRNA from alignment at P-canaliculata_contig10043:1671..6258+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10043.106.1 ID=mRNA_P-canaliculata_contig10043.106.1|Name=mRNA_P-canaliculata_contig10043.106.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=4588bp|location=Sequence derived from alignment at P-canaliculata_contig10043:1671..6258+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10043:1671..6258+ >mRNA_P-canaliculata_contig10043.106.1 ID=mRNA_P-canaliculata_contig10043.106.1|Name=mRNA_P-canaliculata_contig10043.106.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3618bp|location=Sequence derived from alignment at P-canaliculata_contig10043:1671..6258+ (Pelvetia canaliculata dioecious)back to top |