Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 2377 |
| Cds size | 1446 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815576.3809948-CDS-P-canaliculata_contig10030:4487..5210 | 1622815576.3809948-CDS-P-canaliculata_contig10030:4487..5210 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10030 4488..5210 - |
| 1693494146.4102027-CDS-P-canaliculata_contig10030:4487..5210 | 1693494146.4102027-CDS-P-canaliculata_contig10030:4487..5210 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10030 4488..5210 - |
| 1622815576.3942673-CDS-P-canaliculata_contig10030:5228..5951 | 1622815576.3942673-CDS-P-canaliculata_contig10030:5228..5951 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10030 5229..5951 - |
| 1693494146.4193902-CDS-P-canaliculata_contig10030:5228..5951 | 1693494146.4193902-CDS-P-canaliculata_contig10030:5228..5951 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10030 5229..5951 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815576.4090738-UTR-P-canaliculata_contig10030:5951..6882 | 1622815576.4090738-UTR-P-canaliculata_contig10030:5951..6882 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10030 5952..6882 - |
| 1693494146.4287877-UTR-P-canaliculata_contig10030:5951..6882 | 1693494146.4287877-UTR-P-canaliculata_contig10030:5951..6882 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10030 5952..6882 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10030.90.1 >prot_P-canaliculata_contig10030.90.1 ID=prot_P-canaliculata_contig10030.90.1|Name=mRNA_P-canaliculata_contig10030.90.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=482bp
MQGQYVPGGDTRRPQAPHSQQESSWGTLSSGALRGSGGSGDSTDPRPNGQ
SYAVQYLPLTYATGGGISRGGVTPPYSSRQTDNRDRAAYTSGGSITPSSP
ESATAAGAADNHGSNGSVNAGESGHHHRLSGEDPPTRGGARGGVISRVAA
GSGAAASRRSFLAGSGFGSLSGQSTSSSSGVAGRALNGRGGRGRGGSSRG
RSNLPRRSQNFGSSGRGRGRQNFGDTRRSTAPRGRGVSGMWPQPARVSNT
GALTSPAASGGEVGDQLRYSGWWGDDLRSGRETDQNESVAVGGYMGGGWN
RVRSAVGTLDRDGMEAGDEDDVEGEEEEEEGEEEEEGEEENDGAEESDSS
GSSSSGDDDDESLEDGEAVEENMNMRDARRNNRNNAQKASESVGAKRRRD
DASPPPSRNGTQKYMATDSGRGAGGGGGELSSRARDPRAFRAAATTAARE
RRPERAASEDSDRERSRSPSVGRVHESPPRPA back to topmRNA from alignment at P-canaliculata_contig10030:4488..6882- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10030.90.1 ID=mRNA_P-canaliculata_contig10030.90.1|Name=mRNA_P-canaliculata_contig10030.90.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2395bp|location=Sequence derived from alignment at P-canaliculata_contig10030:4488..6882- (Pelvetia canaliculata dioecious)
ATTTCCCCACTGCCAGAACCACGGTCACCCAGTTTGGCGCGTAGCCCTCA
TCGCTCGAAGCTTTCCCGTGGCCTAGATCTCAGCGTTCGTCTCTGCGCTC
AGGTTTTGTGATCATTCTGAATCAAGTGGGGTTGTTCATCTTGACGAGGG
TAAACTCTTTGGGAACTTGTGTGACGCGTGGCGAGTAAGACAACGAAGAC
GGGGGTGGGGAAAACTGTTGGGGCGAGTCGAGTCGCTAGGGCCCCCGAAC
AGCAGCTGGGCGGAGCAACGGGTAGGCATAGAGAGACGAATACCACTCGC
ACTGACTTGAGGCAGCGAATCAGCAAGTTTTTTCGCAGCTGCCTCGATCA
CCCCTCACTCGGCTTGTCTCGTGTCTCGTGAAAACGCACGTTTTCGGTGG
TACTGACTTGATCCCTGACACCATCAGTAGAAGGGTCTCGGTGGTAATCT
CGAGGGCTTGTGAGCGACCAAATGTCGATCGCGACCCTCTAGAAGAAGCG
CTGGCCACATTTCCTCCACGCGGGATCATTCTGTGTTGCTACTTCGCGAC
CAGAGCACGGGCGCCCAAAACGAGTCGTCCCGCTTATTTTTCCCCCCAGA
CGGCGTAAACTACTTGTCTTTTCTGGAGCACATTAACTTCTACTGGACGA
AACGACATACAGTATTGTCTGTTAGATTGATCCAAGTTTGTCTCCGTTTT
TTTGAGGGGGGGGCTCTGGTCTTGCGGAGAAAACGAGCAGAGGGAAACAG
AGGGAAACGATCAAAGCAAAGCAACTGCCCCGCCCTCTTCAGTGATTTAG
GCTGCTTCATCAGCGCTACTTCGGTCTGTAGTAGGTCATCCTAGAAGCGG
CAGCTCGAGTGATCGTATCGAACTGACCCCTCACAAGGTTTTGCGGGGTT
GCTGCGTGAAACCGCGCCTCGCCCGGCGGTCATGCAGGGGCAGTACGTCC
CGGGTGGCGATACCCGTCGCCCACAAGCGCCGCATTCCCAGCAGGAGAGT
TCGTGGGGAACCCTTTCTTCTGGGGCCTTACGCGGCAGCGGCGGCAGTGG
CGATAGTACGGACCCCAGGCCAAATGGCCAGTCATACGCCGTGCAGTACC
TCCCGCTAACATACGCCACGGGTGGCGGGATTTCGAGAGGCGGGGTAACG
CCGCCCTATAGCTCTCGGCAGACGGACAACAGGGATCGCGCGGCGTACAC
GAGCGGGGGATCAATAACCCCATCCTCCCCCGAGTCAGCCACTGCCGCCG
GCGCAGCAGATAATCATGGTAGCAATGGTAGCGTCAATGCCGGTGAGTCG
GGCCATCATCACCGATTGTCTGGCGAGGATCCCCCGACGAGAGGCGGCGC
TCGGGGAGGCGTTATCTCTCGGGTGGCGGCGGGATCGGGGGCGGCGGCAT
CTCGAAGAAGCTTCTTGGCTGGTTCGGGTTTCGGAAGTCTATCAGGCCAA
TCAACGTCGTCTTCATCGGGGGTGGCGGGGCGTGCGTTGAATGGCCGTGG
AGGCCGCGGCCGCGGCGGTAGTTCCCGCGGCCGAAGCAATTTGCCGCGCC
GCTCTCAAAATTTCGGGTCTTCTGGCCGGGGGCGGGGCCGTCAAAATTTC
GGGGATACACGGCGATCCACAGCACCACGAGGTAGGGGGGTTTCGGGGAT
GTGGGTGTCGGGTGGCAGAAAGCCGCAGCCTGCAAGGGTTTCCAACACCG
GCGCGTTGACGAGCCCCGCGGCGTCAGGCGGGGAGGTCGGGGACCAGCTC
CGCTACAGTGGTTGGTGGGGAGACGATCTCAGGTCGGGCAGGGAAACGGA
TCAGAATGAATCGGTGGCCGTTGGTGGGTACATGGGGGGAGGGTGGAATC
GGGTGAGGAGCGCTGTAGGAACACTTGACCGCGATGGAATGGAAGCGGGA
GATGAAGATGATGTGGAAGGCGAGGAAGAGGAGGAGGAGGGAGAGGAAGA
AGAAGAGGGGGAGGAAGAAAACGACGGAGCTGAGGAGTCTGACAGCAGCG
GAAGTAGTTCCAGTGGGGATGACGATGACGAGAGCCTGGAGGACGGGGAG
GCCGTGGAGGAGAACATGAACATGCGCGACGCGCGTCGCAACAATCGCAA
TAATGCCCAAAAGGCCAGCGAGAGTGTCGGCGCGAAGAGGCGCCGAGACG
ACGCCTCGCCCCCTCCTTCCCGAAACGGCACGCAGAAGTACATGGCCACG
GATAGCGGTAGAGGCGCCGGTGGCGGCGGCGGGGAATTATCTTCTAGGGC
GCGGGACCCTCGGGCGTTTCGCGCCGCCGCCACAACCGCAGCGCGCGAAA
GACGTCCAGAGCGCGCGGCGTCGGAGGATAGCGATCGAGAACGCTCGCGG
AGTCCCTCTGTGGGGCGCGTCCACGAGTCACCACCTCGCCCTGCC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10030:4488..6882- >mRNA_P-canaliculata_contig10030.90.1 ID=mRNA_P-canaliculata_contig10030.90.1|Name=mRNA_P-canaliculata_contig10030.90.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2892bp|location=Sequence derived from alignment at P-canaliculata_contig10030:4488..6882- (Pelvetia canaliculata dioecious)
ATGCAGGGGCAGTACGTCCCGGGTGGCGATACCCGTCGCCCACAAGCGCC
GCATTCCCAGCAGGAGAGTTCGTGGGGAACCCTTTCTTCTGGGGCCTTAC
GCGGCAGCGGCGGCAGTGGCGATAGTACGGACCCCAGGCCAAATGGCCAG
TCATACGCCGTGCAGTACCTCCCGCTAACATACGCCACGGGTGGCGGGAT
TTCGAGAGGCGGGGTAACGCCGCCCTATAGCTCTCGGCAGACGGACAACA
GGGATCGCGCGGCGTACACGAGCGGGGGATCAATAACCCCATCCTCCCCC
GAGTCAGCCACTGCCGCCGGCGCAGCAGATAATCATGGTAGCAATGGTAG
CGTCAATGCCGGTGAGTCGGGCCATCATCACCGATTGTCTGGCGAGGATC
CCCCGACGAGAGGCGGCGCTCGGGGAGGCGTTATCTCTCGGGTGGCGGCG
GGATCGGGGGCGGCGGCATCTCGAAGAAGCTTCTTGGCTGGTTCGGGTTT
CGGAAGTCTATCAGGCCAATCAACGTCGTCTTCATCGGGGGTGGCGGGGC
GTGCGTTGAATGGCCGTGGAGGCCGCGGCCGCGGCGGTAGTTCCCGCGGC
CGAAGCAATTTGCCGCGCCGCTCTCAAAATTTCGGGTCTTCTGGCCGGGG
GCGGGGCCGTCAAAATTTCGGGGATACACGGCGATCCACAGCACCACGAG
GTAGGGGGGTTTCGGGGATGTGGATGCAGGGGCAGTACGTCCCGGGTGGC
GATACCCGTCGCCCACAAGCGCCGCATTCCCAGCAGGAGAGTTCGTGGGG
AACCCTTTCTTCTGGGGCCTTACGCGGCAGCGGCGGCAGTGGCGATAGTA
CGGACCCCAGGCCAAATGGCCAGTCATACGCCGTGCAGTACCTCCCGCTA
ACATACGCCACGGGTGGCGGGATTTCGAGAGGCGGGGTAACGCCGCCCTA
TAGCTCTCGGCAGACGGACAACAGGGATCGCGCGGCGTACACGAGCGGGG
GATCAATAACCCCATCCTCCCCCGAGTCAGCCACTGCCGCCGGCGCAGCA
GATAATCATGGTAGCAATGGTAGCGTCAATGCCGGTGAGTCGGGCCATCA
TCACCGATTGTCTGGCGAGGATCCCCCGACGAGAGGCGGCGCTCGGGGAG
GCGTTATCTCTCGGGTGGCGGCGGGATCGGGGGCGGCGGCATCTCGAAGA
AGCTTCTTGGCTGGTTCGGGTTTCGGAAGTCTATCAGGCCAATCAACGTC
GTCTTCATCGGGGGTGGCGGGGCGTGCGTTGAATGGCCGTGGAGGCCGCG
GCCGCGGCGGTAGTTCCCGCGGCCGAAGCAATTTGCCGCGCCGCTCTCAA
AATTTCGGGTCTTCTGGCCGGGGGCGGGGCCGTCAAAATTTCGGGGATAC
ACGGCGATCCACAGCACCACGAGGTAGGGGGGTTTCGGGGATGTGGCCGC
AGCCTGCAAGGGTTTCCAACACCGGCGCGTTGACGAGCCCCGCGGCGTCA
GGCGGGGAGGTCGGGGACCAGCTCCGCTACAGTGGTTGGTGGGGAGACGA
TCTCAGGTCGGGCAGGGAAACGGATCAGAATGAATCGGTGGCCGTTGGTG
GGTACATGGGGGGAGGGTGGAATCGGGTGAGGAGCGCTGTAGGAACACTT
GACCGCGATGGAATGGAAGCGGGAGATGAAGATGATGTGGAAGGCGAGGA
AGAGGAGGAGGAGGGAGAGGAAGAAGAAGAGGGGGAGGAAGAAAACGACG
GAGCTGAGGAGTCTGACAGCAGCGGAAGTAGTTCCAGTGGGGATGACGAT
GACGAGAGCCTGGAGGACGGGGAGGCCGTGGAGGAGAACATGAACATGCG
CGACGCGCGTCGCAACAATCGCAATAATGCCCAAAAGGCCAGCGAGAGTG
TCGGCGCGAAGAGGCGCCGAGACGACGCCTCGCCCCCTCCTTCCCGAAAC
GGCACGCAGAAGTACATGGCCACGGATAGCGGTAGAGGCGCCGGTGGCGG
CGGCGGGGAATTATCTTCTAGGGCGCGGGACCCTCGGGCGTTTCGCGCCG
CCGCCACAACCGCAGCGCGCGAAAGACGTCCAGAGCGCGCGGCGTCGGAG
GATAGCGATCGAGAACGCTCGCGGAGTCCCTCTGTGGGGCGCGTCCACGA
GTCACCACCTCGCCCTGCCCCGCAGCCTGCAAGGGTTTCCAACACCGGCG
CGTTGACGAGCCCCGCGGCGTCAGGCGGGGAGGTCGGGGACCAGCTCCGC
TACAGTGGTTGGTGGGGAGACGATCTCAGGTCGGGCAGGGAAACGGATCA
GAATGAATCGGTGGCCGTTGGTGGGTACATGGGGGGAGGGTGGAATCGGG
TGAGGAGCGCTGTAGGAACACTTGACCGCGATGGAATGGAAGCGGGAGAT
GAAGATGATGTGGAAGGCGAGGAAGAGGAGGAGGAGGGAGAGGAAGAAGA
AGAGGGGGAGGAAGAAAACGACGGAGCTGAGGAGTCTGACAGCAGCGGAA
GTAGTTCCAGTGGGGATGACGATGACGAGAGCCTGGAGGACGGGGAGGCC
GTGGAGGAGAACATGAACATGCGCGACGCGCGTCGCAACAATCGCAATAA
TGCCCAAAAGGCCAGCGAGAGTGTCGGCGCGAAGAGGCGCCGAGACGACG
CCTCGCCCCCTCCTTCCCGAAACGGCACGCAGAAGTACATGGCCACGGAT
AGCGGTAGAGGCGCCGGTGGCGGCGGCGGGGAATTATCTTCTAGGGCGCG
GGACCCTCGGGCGTTTCGCGCCGCCGCCACAACCGCAGCGCGCGAAAGAC
GTCCAGAGCGCGCGGCGTCGGAGGATAGCGATCGAGAACGCTCGCGGAGT
CCCTCTGTGGGGCGCGTCCACGAGTCACCACCTCGCCCTGCC back to top
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