mRNA_P-canaliculata_contig100273.81.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: UPI0019154D0D (HAMP domain-containing protein n=1 Tax=Psychromonas sp. L1A2 TaxID=2686356 RepID=UPI0019154D0D) HSP 1 Score: 426 bits (1095), Expect = 1.390e-146 Identity = 209/256 (81.64%), Postives = 231/256 (90.23%), Query Frame = 1 Query: 4 KLSLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSG 771 KLSLRSVLIFPYV+L++CLA+AIG LSY AG HAVQTVS HLL ETVNRISQAIDRHVVGSVATLEVAFP+GML+D+DI++++ IR RFWSASSLHLDPNNYVYYGN+AGQA+GLYRYS +GELRVKY PEEHRKFY ++GIN PTL S EE+NFDPR+RPWFHAG NNNDTWTSVYIDFRTHDLIATRARQV+G D FEGVVATDMSLKSLNDFVS+LNIS N IAFIIEPDG LIASSVSPNI+R+K G Sbjct: 3 KLSLRSVLIFPYVVLVVCLALAIGSLSYSAGYHAVQTVSKHLLEETVNRISQAIDRHVVGSVATLEVAFPDGMLMDADIKSNLNNIRDRFWSASSLHLDPNNYVYYGNKAGQAIGLYRYSIKKGELRVKYTPEEHRKFYELNGINSTPTLLSIEEKNFDPRVRPWFHAGSRNNNDTWTSVYIDFRTHDLIATRARQVIGRDGTFEGVVATDMSLKSLNDFVSNLNISENAIAFIIEPDGQLIASSVSPNIKRNKDG 258
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: UPI000422E2E4 (sensor domain-containing diguanylate cyclase n=1 Tax=Psychromonas sp. SP041 TaxID=1365007 RepID=UPI000422E2E4) HSP 1 Score: 422 bits (1085), Expect = 3.160e-143 Identity = 208/256 (81.25%), Postives = 231/256 (90.23%), Query Frame = 1 Query: 4 KLSLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSG 771 KLSLRSVLIFPYV+L++ LA+AIG LSY AG HAVQTVSNHLL ETV+RISQAIDRHVVGSVATLEVAFP+GML+D+DI++++ IR RFWSASSLHLDPNNYVYYGN+AGQA+GLYRYS +GELRVKY PEEHRKFY ++GIN PTL S EE+NFDPR+RPWFHAG NNNDTWTSVYIDFRTHDLIATRARQV+G D FEGVVATDMSLKSLNDFVS+LNIS N IAFIIEPDG LIASSVSPNI+R+K G Sbjct: 3 KLSLRSVLIFPYVVLVVFLALAIGSLSYSAGYHAVQTVSNHLLEETVSRISQAIDRHVVGSVATLEVAFPDGMLMDADIKSNLNNIRDRFWSASSLHLDPNNYVYYGNKAGQAIGLYRYSIKKGELRVKYTPEEHRKFYELNGINSTPTLLSIEEKNFDPRVRPWFHAGSRNNNDTWTSVYIDFRTHDLIATRARQVIGRDGMFEGVVATDMSLKSLNDFVSNLNISENAIAFIIEPDGQLIASSVSPNIKRNKDG 258
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: UPI00174EB934 (diguanylate cyclase n=1 Tax=Marinomonas colpomeniae TaxID=2774408 RepID=UPI00174EB934) HSP 1 Score: 384 bits (985), Expect = 5.200e-128 Identity = 188/256 (73.44%), Postives = 220/256 (85.94%), Query Frame = 1 Query: 4 KLSLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSG 771 KLSLR+VLIFPY+ LI+ LA+AIG LSY G AVQTVSNHLL ETV+R+SQAIDRHVVGSVATLE AFP GML + DI+ +++ +R+R W+ASSL+LDPNNYVYYGN+AGQA+GLYR+S D GELRVK+ P+EHR FY I GING P L S EE+NFDPR+RPWF AG N +D WTSVYIDFRTH+L+ATRARQV G + +FEGVVATDMSLKSLNDFVS+LNIS NGIAFIIEPDG+LIASS S NIQ+D++G Sbjct: 3 KLSLRAVLIFPYIALIVFLALAIGLLSYKTGHRAVQTVSNHLLEETVSRLSQAIDRHVVGSVATLEAAFPAGMLAEEDIKDNLDIVRTRLWTASSLYLDPNNYVYYGNKAGQAIGLYRHSVDSGELRVKFTPDEHRSFYQIDGINGEPKLSSIEEKNFDPRVRPWFQAGWKNPDDIWTSVYIDFRTHNLVATRARQVHGINHEFEGVVATDMSLKSLNDFVSNLNISENGIAFIIEPDGMLIASSSSSNIQQDENG 258
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: UPI001748C359 (diguanylate cyclase n=1 Tax=Marinomonas colpomeniae TaxID=2774408 RepID=UPI001748C359) HSP 1 Score: 361 bits (926), Expect = 3.250e-119 Identity = 178/256 (69.53%), Postives = 209/256 (81.64%), Query Frame = 1 Query: 4 KLSLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSG 771 KLSLRS LI PYV LIICLA+AIG LSY AGSHAVQTVSNHLL ETV+R+SQAIDRHVVGSVATLE AFP G+ V DI + EAIR+R W+ASSL+LDPNNYVYYGN AGQ +GLYR S GELRVK++P EHR FY + GING P S EE+NFDPR+RPWF AG N +D WTSVYIDF+T L+ATRAR++ ++FEGVVATDMSL+SLNDF+ +LNIS N IAFI+E +G+LIASS S NI++D++G Sbjct: 3 KLSLRSALILPYVALIICLALAIGLLSYNAGSHAVQTVSNHLLKETVSRLSQAIDRHVVGSVATLETAFPEGIPVQKDIRNEFEAIRTRLWTASSLYLDPNNYVYYGNVAGQGIGLYRDSISSGELRVKFEPNEHRTFYKVDGINGEPQFSSVEEKNFDPRIRPWFQAGWENVDDIWTSVYIDFKTQHLVATRARRIESEYEEFEGVVATDMSLRSLNDFIGNLNISENAIAFIVESNGMLIASSHSSNIRQDENG 258
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: A0A166LGX5_9GAMM (Uncharacterized protein n=1 Tax=Marinomonas sp. TW1 TaxID=1561203 RepID=A0A166LGX5_9GAMM) HSP 1 Score: 357 bits (917), Expect = 7.180e-118 Identity = 178/257 (69.26%), Postives = 211/257 (82.10%), Query Frame = 1 Query: 4 KLSLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSGK 774 K SLRSVLI PYV L+ICLA+AIG LSY AGSHAVQTVS++LL ETV+R+SQAIDRHVVGSVA LE AFP G+ V DI D E IR+R W+ASSL+LDPNNYVYYGN+AGQA+GLYR S D GELRVK+ PEE R FY I GIN P S E++ FDPR+RPWF AG SN ND WTSVYIDFRT++L+ATRAR++ ++ FEGVVATD+SL+SLNDF++ LNIS N IAFI+E +G+LIASS SPNI+RD +G+ Sbjct: 3 KFSLRSVLILPYVALVICLALAIGLLSYNAGSHAVQTVSDNLLKETVSRLSQAIDRHVVGSVAVLETAFPAGIAVQKDIRKDFENIRTRLWTASSLYLDPNNYVYYGNRAGQAIGLYRDSIDSGELRVKFVPEELRNFYAIDGINSEPLFSSVEDKIFDPRVRPWFQAGWSNVNDIWTSVYIDFRTNNLVATRARRIEDENEAFEGVVATDISLESLNDFIASLNISENAIAFIVESNGMLIASSHSPNIKRDDNGR 259
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: UPI0018F158C2 (sensor domain-containing diguanylate cyclase n=1 Tax=Marinomonas sp. C1424 TaxID=2795388 RepID=UPI0018F158C2) HSP 1 Score: 357 bits (917), Expect = 7.390e-118 Identity = 175/256 (68.36%), Postives = 213/256 (83.20%), Query Frame = 1 Query: 4 KLSLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSG 771 KLSLRSVLIFPYV LIICLA+AIG LSY GSHAV+TVS+HLL ETV+R+SQAIDRHVVGSVA LE AFP G+ V DI+TD+E IR+R W ASSL+LDPNNYVYYGN+AGQA+GL+R S D GELRVK+ P+EHR FY ++GI+ P E++NFDPR+RPWF AG ++ ND WTSVYIDF TH+L+ATRAR++ + +FEGVVATDMSL+SLNDF+ +++IS N I+FIIEP+G+LIASS SPNI D +G Sbjct: 3 KLSLRSVLIFPYVALIICLALAIGLLSYNTGSHAVKTVSDHLLKETVSRLSQAIDRHVVGSVAALETAFPAGIPVSKDIQTDLEQIRTRLWMASSLYLDPNNYVYYGNRAGQAIGLFRKSIDSGELRVKFDPDEHRTFYKVNGIDSEPEFSLIEDKNFDPRVRPWFQAGWNSLNDIWTSVYIDFGTHNLVATRARRIQSENGEFEGVVATDMSLQSLNDFLGNIDISENAISFIIEPNGMLIASSHSPNIITDDNG 258
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: A0A1M6FLC9_MALRU (Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Malonomonas rubra DSM 5091 TaxID=1122189 RepID=A0A1M6FLC9_MALRU) HSP 1 Score: 345 bits (884), Expect = 5.980e-113 Identity = 174/254 (68.50%), Postives = 203/254 (79.92%), Query Frame = 1 Query: 10 SLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSG 771 SLR+VLIFPYV L+I LA+AIG LSY GS AV+TV+ HLL ETVNRI QAI+RHVVGSVATLE AFPNGML +IETD + +R+RFW A+SLH+DPNNYVYYGN GQA+GLYR S +EGELRVKY PEEHRK Y I GING+P STE FDPR RPWF A S++ D WTSVYIDF T DL+ATRAR+VL + + +GVVATDM L +LNDFV L+IS NG AFIIEP+GLLIASS SPN+++ + G Sbjct: 5 SLRTVLIFPYVTLVIILALAIGALSYQTGSQAVRTVAEHLLEETVNRIGQAIERHVVGSVATLEAAFPNGMLAPKNIETDFDDMRTRFWIATSLHIDPNNYVYYGNLDGQAIGLYRRSFEEGELRVKYFPEEHRKRYRIDGINGIPVFESTEAALFDPRHRPWFQAAQSSDEDIWTSVYIDFGTQDLVATRARRVLDKNGELQGVVATDMPLTALNDFVGTLDISPNGTAFIIEPNGLLIASSSSPNVKQLEDG 258
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: A0A4U0ZPW1_9DELT (Diguanylate cyclase n=1 Tax=Desulforhopalus sp. IMCC35007 TaxID=2569543 RepID=A0A4U0ZPW1_9DELT) HSP 1 Score: 344 bits (883), Expect = 1.000e-112 Identity = 172/256 (67.19%), Postives = 203/256 (79.30%), Query Frame = 1 Query: 4 KLSLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSG 771 K SLRSVLI PY L++ LA+AIG LSY AG AV TVS+HLL ETV+RI QAIDRHVVGSVATLE AFPNGML IE D IR+RFW A+SLH+DPNNYVYYGN+ GQA+GLYR+S + GELRVKY E+HRK+Y + GING TE + FDPR RPW+ AG + N DTWTSVYIDF T DL+ATRARQVL ++ + EGVVATDMSL++LNDFV+HL IS +G+AFI+E DG LIASS SPN+++DK G Sbjct: 3 KASLRSVLIVPYFTLVVVLAVAIGGLSYVAGRQAVLTVSDHLLKETVSRIGQAIDRHVVGSVATLEAAFPNGMLAPHSIEEDFANIRTRFWIATSLHIDPNNYVYYGNRTGQAIGLYRHSYESGELRVKYTAEQHRKWYRLDGINGELQYSFTETKLFDPRNRPWYKAGQNTNQDTWTSVYIDFGTQDLVATRARQVLDHNGEAEGVVATDMSLRALNDFVTHLEISPSGVAFILESDGNLIASSCSPNVKKDKDG 258
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: A0A4U1AMC5_9DELT (Diguanylate cyclase n=1 Tax=Desulfopila sp. IMCC35006 TaxID=2569542 RepID=A0A4U1AMC5_9DELT) HSP 1 Score: 340 bits (873), Expect = 3.030e-111 Identity = 169/255 (66.27%), Postives = 203/255 (79.61%), Query Frame = 1 Query: 10 SLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSGK 774 SLRSVLIFPYV L+I LA+AIG LSY G AV TVS HLL ETV+RISQA+DRHVVGSVATLE AFPNGML IE+D +R+RFW A+SLH+DPNNYVYYGN++GQA+GL+R+S DEGELR+KY PEEHR Y I GI+G E++ FDPR RPW+ A + +DTWTSVYIDF THDL+ATR+R+VL ++ EGVVATDM L++LNDFVS L IS NG+AFI EPDG LIASS SPNI+++ +G+ Sbjct: 5 SLRSVLIFPYVALVIALAVAIGTLSYFTGGQAVLTVSEHLLRETVSRISQAVDRHVVGSVATLEAAFPNGMLAPVSIESDFINMRTRFWIATSLHIDPNNYVYYGNRSGQAMGLFRHSLDEGELRIKYTPEEHRSIYQIEGIDGEMRSRKIEKQLFDPRQRPWYQAAQTAIHDTWTSVYIDFGTHDLVATRSRKVLNNRQEIEGVVATDMPLRALNDFVSSLKISPNGVAFIFEPDGNLIASSCSPNIRQNNAGE 259
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Match: A0A3Q9BPA7_9BURK (Sensor domain-containing diguanylate cyclase n=1 Tax=Undibacterium parvum TaxID=401471 RepID=A0A3Q9BPA7_9BURK) HSP 1 Score: 329 bits (843), Expect = 1.200e-106 Identity = 164/254 (64.57%), Postives = 198/254 (77.95%), Query Frame = 1 Query: 10 SLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRISQAIDRHVVGSVATLEVAFPNGMLVDSDIETDIEAIRSRFWSASSLHLDPNNYVYYGNQAGQAVGLYRYSADEGELRVKYKPEEHRKFYGISGINGVPTLFSTEEENFDPRMRPWFHAGLSNNNDTWTSVYIDFRTHDLIATRARQVLGYDKKFEGVVATDMSLKSLNDFVSHLNISTNGIAFIIEPDGLLIASSVSPNIQRDKSG 771 SLR++LI PYV L++ LA AIG+LSY AG AV TVS+HLL+ET RI QAIDRH+VGS ATLE AFPNGML +DI+ D+ +RSRFW A+SLH+DPNNYVYYGN AGQA+GLYR+S +EGELR+K KPEE+R Y GI+G S EE+ FDPR RPW+ AG + NDTWTSVYIDF T DL+ATRAR+V + K GVVATDMSL+SLNDFV +L +S +G+AFIIEP+G LIA+S PN+Q K G Sbjct: 12 SLRTILIVPYVALVLVLASAIGWLSYRAGDSAVLTVSDHLLLETAERIGQAIDRHLVGSGATLEAAFPNGMLAQADIDKDLVNLRSRFWIATSLHIDPNNYVYYGNTAGQAIGLYRHSLEEGELRIKTKPEENRIRYRFKGIDGPLQFHSKEEKLFDPRSRPWYTAGANAKNDTWTSVYIDFGTQDLVATRARKVSAANGKLAGVVATDMSLRSLNDFVRNLKMSQHGLAFIIEPNGDLIAASSGPNVQHSKDG 265 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100273.81.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100273.81.1 >prot_P-canaliculata_contig100273.81.1 ID=prot_P-canaliculata_contig100273.81.1|Name=mRNA_P-canaliculata_contig100273.81.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=258bp MKLSLRSVLIFPYVILIICLAIAIGFLSYGAGSHAVQTVSNHLLIETVNRback to top mRNA from alignment at P-canaliculata_contig100273:258..1031+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig100273.81.1 ID=mRNA_P-canaliculata_contig100273.81.1|Name=mRNA_P-canaliculata_contig100273.81.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=774bp|location=Sequence derived from alignment at P-canaliculata_contig100273:258..1031+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100273:258..1031+ >mRNA_P-canaliculata_contig100273.81.1 ID=mRNA_P-canaliculata_contig100273.81.1|Name=mRNA_P-canaliculata_contig100273.81.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1548bp|location=Sequence derived from alignment at P-canaliculata_contig100273:258..1031+ (Pelvetia canaliculata dioecious)back to top |