mRNA_P-canaliculata_contig1002.74.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 436 bits (1122), Expect = 1.580e-139 Identity = 203/279 (72.76%), Postives = 236/279 (84.59%), Query Frame = 3 Query: 3 GYCTVLACELNGENRAVKIPLANCQDPEGAVADILNEIRILKRLRHPNLCTVYGAGGWRKPGDLPFLVLEQLQYQNLAQQCGTDVDEANMKTRIMQRITRAKLPFRKRLDFGFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDSLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAVLYLVDS 839
GYCTVLAC L+GE RAVKIPLA C DPEGAVAD+ NEIRILKRLRHP+LC+VYGAGGWR G+LPFLVLE+LQY+NLAQQCGTDVD+ +M Q+ RAK FRKRL +G QL +LLRYLH+E IPGGFV+HRDLKPSNIG+S DG LKVFDFGLA+L++QRD LTDRYVMTGQTGSQRFMAPEVFDGMPYNEK DI+SYGIVLWE+CALQKPF GMSSH+HA+KVFR G+RP LDKRWP L++L+ CWH + RP+A Q VE + ++ +D+
Sbjct: 91 GYCTVLACMLHGEKRAVKIPLATCSDPEGAVADLTNEIRILKRLRHPHLCSVYGAGGWRAEGELPFLVLERLQYKNLAQQCGTDVDDTSMIVEFKQKKLRAKFRFRKRLGYGLQLGDLLRYLHSESIPGGFVIHRDLKPSNIGISDDGVLKVFDFGLAKLREQRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARIIEKMDA 369
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 231 bits (588), Expect = 5.460e-64 Identity = 127/285 (44.56%), Postives = 178/285 (62.46%), Query Frame = 3 Query: 3 GYCTVLACELNGENRAV-KIPLANCQDPEGAVADILNEIRILKRLR----HPNLCTVYGAGGWRKPGDLPFLVLEQLQYQNLA------QQCGTDVDEANMKTRIMQRITRAKLPFRKRLDFGFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKD-QRDSLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAV 821
G+C V +C NG RAV KIP Q P A AD+L EI I KR+ HPN+ GAG + G+ PFLVLE+L+ +LA + G D + ++ R L +LA+ L+YLH + +PG F++HRDLKP+NIGL +G +KVFDFGL+ +++ +R +L +Y M+G GS+RFM+PEV G+PYNEKVD++S+ IVLWEIC L+KPF GMS H ++V GGLRP LD RWP L+ L++ CWH DP+ RP + ++++ +
Sbjct: 66 GFCIVCSCTYNGVQRAVLKIPKP--QGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAG-FTSRGE-PFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTR-----------LPVALELADALQYLHRDALPG-FILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQI 334
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 214 bits (545), Expect = 1.220e-58 Identity = 117/285 (41.05%), Postives = 164/285 (57.54%), Query Frame = 3 Query: 3 GYCTVLACELNGENRAVKIP--LANCQDPEGAVADILNEIRILKRLR----HPNLCTVYGAGGWRKPGDL---PFLVLEQLQYQNLAQQCGTDVDEANMKTRIMQRITRAKLPFRKRLDFGFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDSLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAVLYL 830
G+C + +C G+ +KIP GA D+L EI I +++ HPN+ +GAG + G+ PFL+LE+LQ G ++ A +R T RL +LAE + +LH IPGG V+HRDLKPSNIGL G +KVFD GL+ ++ ++ T Y M+G GS+RFMAPEV G+ YNEKVD++S+ +VLW+ICAL+KPF GMS H +V +GGLRP LD RWP L L++ CWH P+ RP Q + ++ + +
Sbjct: 26 GFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQ--------GGTLENA------FERSTAVWSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLEAPTRVYEMSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFAM 296
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 214 bits (544), Expect = 6.500e-57 Identity = 119/300 (39.67%), Postives = 171/300 (57.00%), Query Frame = 3 Query: 3 GYCTVLACELNGENRAVKIPLANCQDPEGAVADILNEIRILKRLRHPNLCTVYGAG-----------GWRKPGDLP-----------FLVLEQLQYQNLAQQCGTDVDEAN-MKTRIMQRITRA-KLPFRKRLDFGFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDS-LTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAVLY 827
G C++ E G VK+P +C PE A D+ EI IL+RL+HPN+ + GAG G + G+ F++LE L L + T A+ M + +++R + + P +K +D QLA L YLH I G FVVHRDLKP NI S DGRLK+FDFGLA++ +R L+ RY MTG+TGS R+M PEV +PYNEK D++S+G++LWE+ +L++PF G++ + + V +GG RP L + W LR LM RCW D + RPE +V + + + +
Sbjct: 55 GMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQITH 354
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI) HSP 1 Score: 210 bits (534), Expect = 8.970e-56 Identity = 114/279 (40.86%), Postives = 166/279 (59.50%), Query Frame = 3 Query: 9 CTVLACELNGENRAVKIPLANCQDPEGAVADILNEIRILKRLRHPNLCTVYGAGGWRKPGDLPFLVLEQLQYQNLAQQCGTDVDEANMKTRIMQRITRAKLPFRKRLDF--------GFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDSLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAV 821
C + + EL+G AVKIP +C++P A D+ E+ +LKR+ H ++ + GAG R+ FLVLE L+ LA + D +EA + +R R K K LDF +LA L +LH +P F+VHRDLKP N+G DG LK+FDFGLAR+ +R+ + RY MTG+TGS R+MAPEV + +PYNEKVD++++G++LWE+ ++ F GM ++V G RP LD WP+ LR L+ +CWH D + RP + E ++ +
Sbjct: 7 CEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGN-REQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTK----KYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRTL 279
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE) HSP 1 Score: 211 bits (536), Expect = 6.440e-54 Identity = 116/281 (41.28%), Postives = 168/281 (59.79%), Query Frame = 3 Query: 9 CTVLACELNGENRAVKIPLANCQDPEGAVADILNEIRILKRLRHPNLCTVYGAGGWRKPGDLPFLVLEQLQYQNLAQQCGTDVDEANMKTRIMQRITRAKLPFRKRLDF--------GFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDSLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAVLY 827
C + + EL+G AVKIP +C++P A D+ E+ +LKR+ H ++ + GAG R+ FLVLE L+ LA + D +EA + +R R K K LDF +LA L +LH +P F+VHRDLKP N+G DG LK+FDFGLAR+ +R+ + RY MTG+TGS R+MAPEV + +PYNEKVD++++G++LWE+ ++ F GM ++V G RP LD WP+ LR L+ +CWH D + RP + E ++ +LY
Sbjct: 220 CEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGN-REQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTK----KYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLR-ILY 493
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 204 bits (519), Expect = 7.740e-52 Identity = 114/277 (41.16%), Postives = 159/277 (57.40%), Query Frame = 3 Query: 9 CTVLACELNGENRAVKIPLANCQDPEGAVADILNEIRILKRLRHPNLCTVYGAGGWRKPGDLPFLVLEQLQYQNLAQQCGTDVDEANMKTRIMQRITRAKLPFR----KRLDFGFQLAELLRYLHAEGIPGG--FVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDSLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAV 821
C + + E G VK+P +C+DPE A D+ E+ +L L H ++ + GAG R+ FLVLE L+ LA + +T + I K R L+ +LAE L YLH + GG FVVHRDLKP NIG DG LK+FDFGLAR +R + RY MTG+TGS R+MAPEV + +PYNEKVD++++G++LWE+ ++ F GMS ++V GG+RP LD WP LR L++ CWH D + RP+ + +K +
Sbjct: 152 CRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAG-LREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLH-HSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 426
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: K0R303_THAOC (Protein kinase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R303_THAOC) HSP 1 Score: 204 bits (519), Expect = 4.840e-51 Identity = 108/274 (39.42%), Postives = 159/274 (58.03%), Query Frame = 3 Query: 3 GYCTVLACELNGENRAVKIPLANCQDPEGAVADILNEIRILKRLRHPNLCTVYGAGGWRKPGDLPFLVLEQLQYQNLAQQCGTDVDEANMKTRIMQRITRAKLPFRKRLDFGFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDSLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAVL 824
G + G++ VK CQD A+ +I +E+ I RL HPN+C + GAG P + F+VLE+L ++Q G D + + R + KL + + L LAE L Y H IP V+HRDLKP NIG + DG+L++FDFGLAR+ + D Y M+G+TGS R+MAPEV D PYN+K D++S+GI+LWE+ A +KP+ GM+ + +V GG RP ++K+WP L LM+ CW + + R +V++I ++L
Sbjct: 457 GNAWIHTAVFQGKSVVVKTIKPECQDVALAIKEIESELEIHSRLDHPNICKLVGAGF--TPRGIRFIVLERLDGGTMSQLLGYDNRIRDRRRRFWNK---KKLSYMEVLQCSRDLAESLAYCHGRAIPNAMVMHRDLKPDNIGFALDGKLQLFDFGLARIVENASISNDVYNMSGETGSLRYMAPEVADCRPYNQKADVYSFGIILWELVAFKKPYDGMNREEFYSRVVHGGERPAINKKWPDDLVQLMKSCWDAESSQRINFVDIVDIIDSML 725
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA) HSP 1 Score: 198 bits (504), Expect = 7.320e-51 Identity = 110/279 (39.43%), Postives = 161/279 (57.71%), Query Frame = 3 Query: 30 LNGENRAVKIPLANCQDPEGAVADILNEIRILKRLRHPNLCTVYGAGGWRKPGDLPFLVLEQLQYQNLAQQCGTDVDEANMKTRIMQRITRAKLPFRKRLDFGFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDSLTD-RYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAVLYLVDSDESDTFSK 863
NG+ VK CQD A+ +I +E+ I RL H N+ + GAG K + F+VLE+L +L Q G D + + R ++ + A + L + +A +RY H + +PG V+HRDLKP NIG + DG LKVFDFGLARL + ++ TD +Y M+G+TGS R+MAPEV PYN K D++S+G++LWE+ A +KPF V GG R K +K+WP+ L L+ CWH +P++RP ++++ I A+L + T SK
Sbjct: 222 FNGKPVVVKTLKPECQDVVVAINEIESEVAIHARLNHLNVVELIGAGTTSK--GVRFVVLERLDGGSLTQLLGYDTRIRDRRRRFWKKKSIAYVDV---LRYARSIASAMRYCHEDAVPGSTVLHRDLKPDNIGFALDGTLKVFDFGLARLLENSNAKTDEKYSMSGETGSLRYMAPEVARSFPYNYKADVYSFGVILWEMNAGKKPFADYDRDTFYDSVIHGGERMKCNKKWPEELSDLITACWHENPDLRPSFAEIIDKIDALLEHEKDGSTGTKSK 495
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Match: A0A4D9DAK6_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAK6_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.320e-50 Identity = 107/279 (38.35%), Postives = 155/279 (55.56%), Query Frame = 3 Query: 3 GYCTVLACELNGENRAVKIPLANCQDPEGAVADILNEIRILKRLRHPNLCTVYGAGGWRKPGDLPFLVLEQLQYQNLAQQCGTDVDEANM-KTRIMQRITRAKLPFRKRLDFGFQLAELLRYLHAEGIPGGFVVHRDLKPSNIGLSKDGRLKVFDFGLARLKDQRDSLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKVDIFSYGIVLWEICALQKPFVGMSSHQHAKKVFRGGLRPKLDKRWPKGLRTLMERCWHTDPNVRPEAGQVVEMIKAVLYLVD 836
G V N VKI +C+ E + +I EI +++ L HPN+ Y A GW F+V+E+L+ +L Q+ G + + + R R + L + Q+AE L+Y+H E +PG V+HRDLKP N+G DG LK+ DFGLA+ + ++ + MTG+TGS R+MAPEV YN+K DIFS+ ++WE+ L KPF G + H V +GG RP L+KRWPK L++ CW T+ N RPE +V E +K +L V+
Sbjct: 204 GTSVVYTATYNRLPVIVKILKEDCERNELRLREIRGEIELMQSLNHPNIVQ-YIASGWEPR---TFVVMERLEGGSLNQRLGFAPTHSGVHRNNFFTRDVRKAFSYESLLKYALQMAEALKYMHDEALPGYAVMHRDLKPDNVGFKADGTLKILDFGLAKAIPKDETARQKVRMTGETGSIRYMAPEVALHKQYNQKADIFSWSFIVWEMATLTKPFEGYTKHDFFTNVVKGGERPPLNKRWPKEFAELLQACWDTNQNKRPEMAEVCEALKVLLAGVE 478 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1002.74.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1002.74.1 >prot_P-canaliculata_contig1002.74.1 ID=prot_P-canaliculata_contig1002.74.1|Name=mRNA_P-canaliculata_contig1002.74.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=200bp MKTRIMQRITRAKLPFRKRLDFGFQLAELLRYLHAEGIPGGFVVHRDLKPback to top mRNA from alignment at P-canaliculata_contig1002:293..7792+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig1002.74.1 ID=mRNA_P-canaliculata_contig1002.74.1|Name=mRNA_P-canaliculata_contig1002.74.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=7500bp|location=Sequence derived from alignment at P-canaliculata_contig1002:293..7792+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig1002:293..7792+ >mRNA_P-canaliculata_contig1002.74.1 ID=mRNA_P-canaliculata_contig1002.74.1|Name=mRNA_P-canaliculata_contig1002.74.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at P-canaliculata_contig1002:293..7792+ (Pelvetia canaliculata dioecious)back to top |