mRNA_P-canaliculata_contig100139.66.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig100139.66.1 vs. uniprot
Match: A0A518ESB1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ESB1_9BACT) HSP 1 Score: 161 bits (408), Expect = 9.200e-46 Identity = 78/123 (63.41%), Postives = 93/123 (75.61%), Query Frame = 1 Query: 7 REDVGGAIDAGIAYLIAQQKPDGSWGDDAPKMLELGFALNTYRSWRIASHGISCMALACVDETPERLDALRSAVKFLSEAELPKRDSDWDIDYVWTSLYGFTAAIELLGDPRLQEEGSLASLR 375
RE G AID A+L+ + + DGSWGDD P + E+GFAL+T+RSWRIASHGI CMALA +DETPER AL AV +L + ELP+RDSDWDIDYVW+SLYGFTA IELL D R Q + A L+
Sbjct: 43 REAAGPAIDQAAAFLVGEIREDGSWGDDLPTLEEVGFALSTFRSWRIASHGIVCMALASLDETPERRAALERAVGWLCDCELPRRDSDWDIDYVWSSLYGFTATIELLQDERFQVDAWRARLQ 165
BLAST of mRNA_P-canaliculata_contig100139.66.1 vs. uniprot
Match: A0A523PU28_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PU28_9BACT) HSP 1 Score: 107 bits (268), Expect = 3.540e-25 Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 1 MAREDVGGAIDAGIAYLIAQQKPDGSWGDDA-PKMLELGFALNTYRSWRIASHGISCMALACVDETPERLDALRSAVKFLSEAELPKRDSDWDIDYVWTSLYGFTAAIELLGDPRLQEEGSLASL 372
++RE+V +D + YL+ Q G WG A +L+LGFA TY +++ +H ++CMALA V ET ER AL +AV +L + +P R DWDID VW++LYGF A ++L+ D R + A L
Sbjct: 44 LSREEVYTDLDRAVQYLVDTQAETGRWGTRACESLLDLGFATETYHAYQFGAHAVACMALAAVSETSERRIALENAVHWLCGSPIPTRGDDWDIDNVWSALYGFVALVDLVQDERFARDPWKAGL 168
BLAST of mRNA_P-canaliculata_contig100139.66.1 vs. uniprot
Match: A0A7Y5PYG1_9PLAN (Terpene cyclase/mutase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5PYG1_9PLAN) HSP 1 Score: 102 bits (255), Expect = 1.770e-23 Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 1 MAREDVGGAIDAGIAYLIAQQKPDGSWGDDAP-KMLELGFALNTYRSWRIASHGISCMALACVDETPERLDALRSAVKFLSEAELPKRDSDWDIDYVWTSLYGFTAAIELLGDPR 342
M +E A++ +A++ Q PDGSW AP ++ELGF+ TY +W++ + ++ MAL +ETPER AL +++ LP R DWD+DY+W SLYG A++ L DPR
Sbjct: 34 MTQEQARVALERSLAFITGSQNPDGSWCGSAPDSVMELGFSPETYYTWQLGAVELTLMALMQCEETPERRAALDKGMQWFCTTRLPARGDDWDVDYMWPSLYGVVCAVDALDDPR 148
BLAST of mRNA_P-canaliculata_contig100139.66.1 vs. uniprot
Match: A0A7C2L212_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C2L212_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 9.270e-11 Identity = 34/110 (30.91%), Postives = 53/110 (48.18%), Query Frame = 1 Query: 25 AIDAGIAYLIAQQKPDGSWGDDAPKMLELGFAL----NTYRSWRIASHGISCMALACVDETPERLDALRSAVKFLSEAELPKRDSDWDIDYVWTSLYGFTAAIELLGDPR 342
AI G+A+L+A Q PDGSWG + ++ T+RSW++A+ G+ C+AL + L + +L + +R S+WD W +YG A PR
Sbjct: 43 AISRGVAFLLADQNPDGSWGGPRNAVWTFTGSVWSNPETHRSWKVATTGLCCLALLEAGDGEPALSTANRGIDYLLDHAAVRRPSEWDTMNNWAYIYGVQALAAAYAHPR 152
BLAST of mRNA_P-canaliculata_contig100139.66.1 vs. uniprot
Match: A0A5B9W5M4_9BACT (Uncharacterized protein n=1 Tax=Aquisphaera giovannonii TaxID=406548 RepID=A0A5B9W5M4_9BACT) HSP 1 Score: 52.0 bits (123), Expect = 3.270e-5 Identity = 41/133 (30.83%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 13 DVGGAIDAGIAYLIAQQKPDGSWGD-DAPKMLELGFALNTYRSWRIASHGISCMAL-----ACVDETPERLD---------ALRSAVKFLSEAELPK-RDSDWDIDY-VWTSLYGFTAAIELLGDPRLQEEGS 360
++ +I+ G+A+L+ Q+PDGSWG + K L + + ++ ++R+A+ + AL A TP R++ A+ FL ELP+ R D + Y VW YG TA + + G RL EG+
Sbjct: 63 EIAASINRGVAFLLKDQRPDGSWGSPERTKELNIIAGVGSHHAFRVATTALCVAALTEATQAAEARTPGRVELARPEDVRRAIERGEDFLFR-ELPRVRRHDAMLIYNVWAHAYGITALVRMHG--RLPGEGA 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100139.66.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100139.66.1 >prot_P-canaliculata_contig100139.66.1 ID=prot_P-canaliculata_contig100139.66.1|Name=mRNA_P-canaliculata_contig100139.66.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=125bp MAREDVGGAIDAGIAYLIAQQKPDGSWGDDAPKMLELGFALNTYRSWRIAback to top mRNA from alignment at P-canaliculata_contig100139:6..380- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig100139.66.1 ID=mRNA_P-canaliculata_contig100139.66.1|Name=mRNA_P-canaliculata_contig100139.66.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=375bp|location=Sequence derived from alignment at P-canaliculata_contig100139:6..380- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100139:6..380- >mRNA_P-canaliculata_contig100139.66.1 ID=mRNA_P-canaliculata_contig100139.66.1|Name=mRNA_P-canaliculata_contig100139.66.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at P-canaliculata_contig100139:6..380- (Pelvetia canaliculata dioecious)back to top |