mRNA_P-canaliculata_contig100084.58.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: A0A518J063_9BACT (DUF547 domain-containing protein n=3 Tax=Rosistilla TaxID=2795779 RepID=A0A518J063_9BACT) HSP 1 Score: 256 bits (655), Expect = 1.340e-82 Identity = 121/207 (58.45%), Postives = 155/207 (74.88%), Query Frame = 1 Query: 1 KPTPVVDASGVDHKIWDYLLKSHVSEGLVDYTGIKKDYLFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINHKINDSVMNHEFDGKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWIKE 621 KPTP DASGVDH +WDYLLK+HV GLVDY GI +D+LF Y+R++ + +P L T ++LAL CNAYNA VI+GVI HKI DSVMN+ +G +FF+++EH+ G+T SL+ +E +LIRK F+EPRIHVALVC A+SCP IRAEAY G R+ Q +DQS QFAN KYV DA S L+LS +L+WYGGD++ P G YL W+ + Sbjct: 39 KPTPHPDASGVDHALWDYLLKTHVENGLVDYDGIARDHLFRTYLRQLSESEPSKLTTSADQLALFCNAYNAFVINGVITHKIRDSVMNYNVEGTEFFDLKEHILYGETFSLNEIEHELIRKRFREPRIHVALVCAAKSCPAIRAEAYTGPRLTKQFEDQSIQFANQTKYVTYDAASDTLRLSPLLDWYGGDWD---PVGGYLPWLAD 242
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: A0A5C6CLH5_9BACT (DUF547 domain-containing protein n=1 Tax=Novipirellula galeiformis TaxID=2528004 RepID=A0A5C6CLH5_9BACT) HSP 1 Score: 254 bits (648), Expect = 1.450e-81 Identity = 124/216 (57.41%), Postives = 159/216 (73.61%), Query Frame = 1 Query: 1 KPTPVVDASGVDHKIWDYLLKSHVSEGLVDYTGIKKDYLFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINHKINDSVMNHEFDGKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWIKE-LTDPELAE 645 KPTP DASGVDH +WDYLLKS+V GLVDY G+ +D+LF Y+R++ + +PE L T ++LAL CNAYNA VI+GVI HKI SVM+ + D +FF+++EH+ G+TISL+HLE +LIRK F+EPR+HVALVC A+SCP IRAEAY+G R+ QLQDQS QFANS YV + L+LS ILNWYG D++ G YL W+ E + D EL + Sbjct: 39 KPTPHPDASGVDHALWDYLLKSYVENGLVDYDGMARDHLFRTYLRQLSEAEPEKLTTAADQLALFCNAYNAFVINGVITHKIRGSVMDFQVDDNEFFDIKEHILRGQTISLNHLEHELIRKRFREPRVHVALVCAAKSCPAIRAEAYIGRRLGAQLQDQSIQFANSSLYVDFEPSDATLRLSPILNWYGEDWDH---VGGYLPWLAERVQDAELKQ 251
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: A0A518KWR3_9BACT (DUF547 domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A518KWR3_9BACT) HSP 1 Score: 252 bits (643), Expect = 8.830e-81 Identity = 119/205 (58.05%), Postives = 155/205 (75.61%), Query Frame = 1 Query: 1 KPTPVVDASGVDHKIWDYLLKSHVSEGLVDYTGIKKDYLFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINHKINDSVMNHEFDGKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWI 615 KPTP DASGVDH +WDYLLK+HV GLVDY GI +D+LF Y+R++ + DP L T ++LAL CNAYNA VI+GVI H+I DSVM ++ +G +FF+++EH+ G+T+SL+ +E +LIRK F+EPRIHVALVC A+SCP IR+EAY G R+ QL+DQS QFAN KYV DA S LKLS +L+WYG D+++ G YL W+ Sbjct: 39 KPTPHPDASGVDHALWDYLLKTHVENGLVDYDGIARDHLFRTYLRQLSESDPGKLTTSADQLALLCNAYNAFVINGVITHEIRDSVMKYKVEGAEFFDLKEHILHGETLSLNQIEHELIRKRFREPRIHVALVCAAKSCPAIRSEAYAGTRLAKQLEDQSIQFANQPKYVTYDATSDTLKLSPLLDWYGSDWDQ---VGGYLPWL 240
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: A0A5C6B2L5_9BACT (DUF547 domain-containing protein n=1 Tax=Stieleria varia TaxID=2528005 RepID=A0A5C6B2L5_9BACT) HSP 1 Score: 241 bits (616), Expect = 9.860e-77 Identity = 117/210 (55.71%), Postives = 152/210 (72.38%), Query Frame = 1 Query: 1 KPTPVVDASGVDHKIWDYLLKSHVSEGLVDYTGIKKDYLFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINHKINDSVMNHEFDGKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWIKELTD 630 +P+ D SGVDH +WDYLLKS+V GLVDY + +DYLF Y+R++ + +P+ L T ++LAL CNAYNA VI GVI HKI DSVMN + D FF+++EHLFAGKT+SL+ +E +LIRK F+EPRIHVALVC AR CP IR EAY G R+ QLQDQS FAN+ KYV D + ++LS +L+WYG D++ G YL+W+ LT+ Sbjct: 37 RPSISADPSGVDHNLWDYLLKSYVDGGLVDYDAMSRDYLFRTYLRQLSEAEPQNLTTATDQLALLCNAYNAFVIDGVIRHKIADSVMNFQQDELGFFDIKEHLFAGKTLSLNQIEHELIRKRFREPRIHVALVCAARDCPSIRREAYTGRRLGTQLQDQSVLFANTPKYVHYDESTNTVQLSPLLDWYGDDWSTA---GGYLAWLSGLTE 243
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: A0A4V0I4B8_9BACT (DUF547 domain-containing protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0I4B8_9BACT) HSP 1 Score: 223 bits (569), Expect = 1.350e-69 Identity = 112/210 (53.33%), Postives = 141/210 (67.14%), Query Frame = 1 Query: 1 KPTPVVDASGVDHKIWDYLLKSHVSEGLVDYTGIKKDYLFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINHKINDSVMNHEFDGKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWIKELTD 630 KPTP DASGVDH +WDYLLK+HV G VDY G+ +D+LF Y+R+IG P L T DE+LA CNAYNALVI+GVI H+I DSVM+++ G FF+ +EHL AGKT+SL+ LE +IR F +PR+H +LVCGAR CP IR EAY G + QL DQ+ QF N+ K V DA G + L+ I+ WY D+ R G L W+ D Sbjct: 40 KPTPNPDASGVDHALWDYLLKAHVENGQVDYDGMARDHLFRTYLRQIGSARPCDLATRDEQLAFYCNAYNALVINGVIIHRIKDSVMSYKHAGVGFFDAKEHLVAGKTVSLNDLEHKIIRPTFDDPRVHFSLVCGARGCPPIRPEAYCGRCLNLQLDDQASQFCNNPKSVAYDAPRGAVVLNPIVKWYADDWKAR---GGVLPWLAGRVD 246
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: A0A2E3Z5M2_9PLAN (DUF547 domain-containing protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3Z5M2_9PLAN) HSP 1 Score: 210 bits (535), Expect = 1.730e-64 Identity = 99/192 (51.56%), Postives = 141/192 (73.44%), Query Frame = 1 Query: 4 PTPVVDASGVDHKIWDYLLKSHVSEGLVDYTGIKKDYLFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINHKINDSVMNHEFD-GKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDF 576 P +DA+GVD +WD+LL+++V++GL+DY G+K+D+ F YI ++ P+ L ++ +LA CNAYNA VI+GVI HKI+ SV++ + + GK FF++ EH+ AG+TISLDH E +IR ++EPRIHVALVC A+SCP IR EAY G RI++QL+DQ++ FA+++ YVK E K+ LS IL WY DF Sbjct: 41 PEIQLDAAGVDQGLWDFLLRNYVADGLIDYDGLKRDHYFKVYIAQLATAQPDKLPDENHRLAFDCNAYNAFVINGVIIHKIHGSVLDFKSNAGKGFFDLTEHILAGETISLDHFEHQMIRPTYQEPRIHVALVCAAKSCPAIRGEAYQGKRIREQLEDQAKLFAHNQAYVKYQPEEKKVYLSPILKWYAEDF 232
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: A0A7U4E579_RUNSL (DUF547 domain-containing protein n=4 Tax=Runella TaxID=105 RepID=A0A7U4E579_RUNSL) HSP 1 Score: 144 bits (362), Expect = 5.060e-39 Identity = 87/225 (38.67%), Postives = 123/225 (54.67%), Query Frame = 1 Query: 7 TPVVDASGVDHKIWDYLLKSHVSE-GLVDYTGIKKDY-LFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINH------------KINDSVMNHEFDGKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWIKELTDPEL 639 TP +A+ VDH WD LLK HV++ G V+YT KKDY +Y+ + + P + DE+LA NAYNA I ++++ KI +N +D K F + GK + L+++E +IRK F EPRIH ALVC A+SCP +R EA+V DR+ QL +Q R F N + K K LS IL+WYGGDF ++ P W+ + + +L Sbjct: 21 TPTSNAAPVDHSAWDKLLKKHVNDKGFVNYTAFKKDYDELKKYLNMLSESAPNDKWSKDEQLAYWINAYNAFTIQLILDNYPGITSIKDIGSKIKIPFVNTPWDVK-FITI-----GGKKMDLNNIEHGIIRKKFDEPRIHFALVCAAKSCPPLRNEAFVADRLDKQLDEQGRDFINDK--TKNSVSKDKADLSKILSWYGGDFTKKMP---IADWVNKYSTVKL 234
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: A0A3C1G2L9_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A3C1G2L9_9BACT) HSP 1 Score: 142 bits (358), Expect = 2.610e-38 Identity = 81/212 (38.21%), Postives = 121/212 (57.08%), Query Frame = 1 Query: 16 VDASGVDHKIWDYLLKSHVS-EGLVDYTGIKKDYLFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINHKINDSVMNHEFDG----KDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWIKELTDPE 636 V A+ DH +++ +L +V +GLVDY GI KD FY Y+ + D +AL T D +LA NAYNA+ I VI K SV G +FF E++ AGK +S D +E +++RK F +PRIH A++C + CP I AY G+ +Q QL +++++ NS + +ID L +S I W+GGDF + GS +++IK + E Sbjct: 27 VTAATFDHSLFNRILSEYVDHKGLVDYNGIAKDKNFYAYMDSLKNVDVQAL-TRDGQLAFWINAYNAVTIEKVIRWKPKKSVRETLVPGVWISTNFFTTRENVVAGKKLSQDDIENEILRKQFHDPRIHFAIICASMGCPPIPKFAYTGEMVQSQLASETQKYLNSPRGTRIDRAENTLYISKIFEWFGGDFIQA--AGSVMNFIKPYLNKE 235
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: UPI00041C82AC (DUF547 domain-containing protein n=1 Tax=Runella zeae TaxID=94255 RepID=UPI00041C82AC) HSP 1 Score: 140 bits (352), Expect = 1.580e-37 Identity = 84/227 (37.00%), Postives = 126/227 (55.51%), Query Frame = 1 Query: 7 TPVVDASGVDHKIWDYLLKSHVSE-GLVDYTGIKKDYL-FYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINH------------KINDSVMNHEFDGKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWIKELTDPELAE 645 TP +A+ VDH WD LLK HV++ G V+YT KKDY +Y+ + P + +E+L NAYNA I ++++ KI +N +D K F + AG+ + L+++E +IRK F EPRIH ALVC A+SCP +R EAYV DR+ QL +Q+R F N + K + K LS I++WYGGDF ++ P + W+ + + ++ + Sbjct: 21 TPTSNAAPVDHSAWDKLLKKHVNDKGFVNYTAFKKDYEELKKYLDMLSASAPNDKWSKEEQLTYWINAYNAFTIQLILDNYPGIGSIKDIGSKIKIPFVNTPWDVK-FIKI-----AGQKMDLNNIEHGIIRKKFDEPRIHFALVCAAKSCPPLRNEAYVADRLNAQLDEQARDFINDK--TKNNVTKDKATLSKIMSWYGGDFTKQMP---IVDWVNKYSSVKITK 236
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Match: UPI0019E20DB7 (DUF547 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019E20DB7) HSP 1 Score: 139 bits (350), Expect = 3.410e-37 Identity = 73/204 (35.78%), Postives = 122/204 (59.80%), Query Frame = 1 Query: 22 ASGVDHKIWDYLLKSHVS-EGLVDYTGIKKDYLFYEYIREIGQCDPEALETDDEKLALACNAYNALVIHGVINHK----INDSVMNHEFDGKDFFNVEEHLFAGKTISLDHLETDLIRKVFKEPRIHVALVCGARSCPVIRAEAYVGDRIQDQLQDQSRQFANSEKYVKIDAESGKLKLSSILNWYGGDFNERYPEGSYLSWIK 618 A+G DH +D +LK++V+ +GLVDY GI D F Y+ + +++ D + LA NAYNA+ I VI K + ++ + + G FF EH AGK++S D +E +++RK FK+PRIH A++C + SCP + AY + +Q +L +++R++ NS++ +ID+ L LS + +W+ GDF + GS +++K Sbjct: 24 AAGFDHSRFDQVLKTYVNNQGLVDYNGIAGDQSFKMYMESLKSAQSDSMSRDGQ-LAFWINAYNAVTIDKVIKWKPKKSVRETFVPGVWTGTKFFTTREHTVAGKSLSQDDIEHEILRKQFKDPRIHFAIICASSSCPRLPRFAYTDENVQAKLAEETRKYINSDRGTQIDSAKNTLYLSKLFDWFAGDFESK--SGSVQNFLK 224 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100084.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100084.58.1 >prot_P-canaliculata_contig100084.58.1 ID=prot_P-canaliculata_contig100084.58.1|Name=mRNA_P-canaliculata_contig100084.58.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=215bp KPTPVVDASGVDHKIWDYLLKSHVSEGLVDYTGIKKDYLFYEYIREIGQCback to top mRNA from alignment at P-canaliculata_contig100084:386..1030+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig100084.58.1 ID=mRNA_P-canaliculata_contig100084.58.1|Name=mRNA_P-canaliculata_contig100084.58.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=645bp|location=Sequence derived from alignment at P-canaliculata_contig100084:386..1030+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100084:386..1030+ >mRNA_P-canaliculata_contig100084.58.1 ID=mRNA_P-canaliculata_contig100084.58.1|Name=mRNA_P-canaliculata_contig100084.58.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1290bp|location=Sequence derived from alignment at P-canaliculata_contig100084:386..1030+ (Pelvetia canaliculata dioecious)back to top |