mRNA_P-canaliculata_contig100.47.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: D8LT38_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT38_ECTSI) HSP 1 Score: 764 bits (1972), Expect = 6.010e-253 Identity = 487/1169 (41.66%), Postives = 673/1169 (57.57%), Query Frame = 1 Query: 1 LNNLLYPEFLAALDDLAMQHPDVCKMVNSAAGLALEERVANITREVPPESHREIGSGTHLGLSSGVSPRVGSRTHPVNTPPSARAPATHYQRLERNPEKIVNVQAVSPKNVKKVNTSVAGR-AATRAEAEAGVGVLSE------AVAESNAHPAEFDMVG-FCPDDQRLLILLQSHILVNSEARKSVCSEMEAEGIGARQRAFGRIEAAALLIQAALVRGCAGRSLAREARKKRTSRQSSPGVSWP--LLRCR-QGFLARTRASKLAASRYFR*LDEQVGAEYYFDLKTGESSWTKPKILGKFELGSAVVVPPKEEMLVPMCNECSQDFVDCDEDMLCTLCD-----NRMHRAGSSATHLRVVIHMCDECRFQQY-------GDNFCASCFGYVHRRGRLRRHKFEPLVAFCHQCGERAQAVRCFGCHPEGLLLLCKPCQRFKHGNIPINETTTHRVEALGLKSMKAQRLKAERSAHIKKMRMKTESVMMAQKKLDTRRLEKAIKRQTASRGYLARKRRKHLISRNSSWRVQRLRDDEVRENKIYKLRR*LGNAPLLTSDTDQELVLKQYPRWWETTIVDIVIPGIGWHEGARMVREQVFFFNNSRRRGRWAILEGRLRLINARWLLRRMERKQLGRDAFYARTVAAYCSVRPEGGTGIQHKEALQQVSRKAKRAVKNMEEQRRKAEEMAKKAQNELEALVGPFRPRKTVRTTLREGMLMPFVLSVNRGEATARLEKIQGISEVLHWMPKGRWVRIDR--PSG------GECASVPLPPSCAMGPFVVRGVKDGNGGKIIREDGVEVEGDAFTFMSFLGFRKRGASVDETHETVGVTMGQYSTDMASKIARAPIGSHCGSHGEESAEKGSWLHSTTTRTTPLLLLNRQWLLPSTSHCRVYAMPLLPFPRKVGPGLSSLKT-----------LMCAALGLQVEHAQLSC--TNYKCVSTKLRRTSNYQHEAVQSNKRL----QRIGDCKRVVWKEHGRRRKTQGVRACAVIVQILEYL--ITKPPGTYSRTSFAGMEDHGELKSCLSQQVT-----------------IMYRSQRQESEA---VVEFVGHIWIDLDTPTPVLREFIRRFCGAWLNEHAKGERFLMEDSRGILIGRSEEGGRITATAMQMVQERFNKETRNTDYIVFVQIE 3297
L++L YP FLAALDD+ QHPD+ ++ ++AA A EE VA + R +P + + S SGV + P N SAR AT + + N + + +N + ++GR A A++ AG G ++ A A AE + +G F PDDQRLL+LLQ + VNS+A K CSEMEAEG GAR+RA R+EAAA+++QA + RGC+GR+LAREA +R + ++W LL+ R + F ARTRA+KLA RY+R LD GAEYYFD KTG+SSWTKPKILGKF++ +AVVVP EE++VPMC+EC+ +R+HR G+++THLRV I GDNFC SCF ++HR+GR+RRH FEPLV CH CG+RAQA +CFGC EG LLLCK C +H + ++ HR+EA+G +S+K +RLK E+S+ +++ MK ES ++ D + L AIK Q RGYLARKRR+HL+ ++ W++QR +DD++R+ YK+ R G A LL SDT+QE+VLKQYPRWW++TI+DIV P GWHEGA+MVREQ FF ++R+GRW + RLRL LR RKQ + + V Y R +GG HKE LQQ+SRKAKRAV+N +++R KAEE K A+N LEAL+GPFR R VR + EGMLMPF +S+ +G+A ARLEK Q + EVL WMP GR VR++ PS E + P PPS A GPF V GVK+ + D + A + ++ K E T G+ G +T A I G+ G+ G E + + +++P+L+L+RQWLL C+ YAMP+LP +K+ L L+T + A +G +L T + S R + + +KRL +++ D + E +RR + V + + L+ + K S G + G + L ++V IM+RS + +E VV+ VG+I +DLDTPTPVLREFIRR+CG WLNEHAKG+ F+MED+ G ++ R+ EGG++ ATAM MVQER NK TR+T+ ++FV+ E
Sbjct: 126 LSHLPYPSFLAALDDIGTQHPDLRRLGDAAAAAAQEESVAVLVRAIPGAT-TAVSSLVEADRGSGVGKKS---KRPYNR--SARGEATSPTNADGKRSRAENSRTPTTENRAEKAAKLSGRPGAAGAKSPAGGGATAKVAGAKAAXXXXTAETAEVECLGGFRPDDQRLLVLLQKFVFVNSQAGKEACSEMEAEGRGARRRALDRLEAAAMVVQACVARGCSGRALAREASGRRELHRHDARLNWAASLLQTRMRAFAARTRAAKLAMKRYYRCLDGLTGAEYYFDPKTGKSSWTKPKILGKFDISTAVVVPAGEEIMVPMCHECAXXXXXXXXXXXXXXXXXXXXVDRIHRTGNASTHLRVPIEXXXXXXXXXXXXXXXXXGDNFCVSCFAHIHRKGRIRRHTFEPLVGMCHDCGDRAQAFQCFGCDTEGCLLLCKRCLEARHHYLLPDQLAEHRIEAVGFRSLKLKRLKEEQSSRARELWMKAESAATGKRSRDKKMLAAAIKIQAVWRGYLARKRRRHLMDQHLLWKIQRHKDDQIRKKLTYKVARYFGKARLLKSDTNQEIVLKQYPRWWQSTIMDIVRPTFGWHEGAKMVREQEFFAKKTKRKGRWKVHAARLRLGGELIRLRMESRKQRKYERLRDKAVGVYQHARAKGGVSAAHKEELQQISRKAKRAVQNHQQEREKAEERVKAAENALEALIGPFRLRNNVRAAVTEGMLMPFPVSMQKGKANARLEKGQNMREVLKWMPYGRRVRVEPTDPSSVYLLPEAEAGACPRPPSHAFGPFYVVGVKESR-----QNDKKDKAAAAASALAGNLASKEPGDTKERPAT-GLGSGAAATTPAESIGEG--GTAAGADGGEDS-----VVDLKAQSSPVLILDRQWLLEEAPLCQAYAMPILPVIQKI---LMVLRTGIRDSSVVQVAIKVAVVGTHQHRDRLERWQTKFDDDSDMHARLERWAAGSEDRSKRLMLRRRKLFDVEEGFQPE--KRRVMEAVESVLALWTSLQEMTDFAKSAAATGLASTQGADGKGMIGGKLGREVVVQLFKKWVQSDDRTKVIIMHRSGKAANEPAVEVVQVVGYIKVDLDTPTPVLREFIRRYCGGWLNEHAKGDHFVMEDTTGEIVRRNREGGKLNATAMDMVQERINKTTRDTESVIFVRDE 1270
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: A0A6H5KU11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU11_9PHAE) HSP 1 Score: 275 bits (702), Expect = 3.230e-78 Identity = 180/452 (39.82%), Postives = 237/452 (52.43%), Query Frame = 1 Query: 1 LNNLLYPEFLAALDDLAMQHPDVCKMVNSAAGLALEERVANITREVPPESHREIGSGTHLGLSSGVSPRVGSRTHPVNTPPSARAPATHYQRLERNPEKIVNVQAVSPKNVKKVNTSVAGRAATRAEAEAGVGVLSEAVAES---------------------NAHPAEFDMVG-FCPDDQRLLILLQSHILVNSEARKSVCSEMEAEGIGARQRAFGRIEAAALLIQAALVRGCAGRSLAREARKKR----------------------TSRQSSPGVSWPLLR-------CRQ----GFLARTRASKLAASRYFR*LDEQVGAEYYFDLKTGESSWTKPKILGKFELGSAVVVPPKEEMLVPMCNECSQDFVDCDEDMLCTLCDNRMHRAGSSATHLRVVIHMCDECRFQQYGDNFCASCFGYVHRRGRLRRHKFEPLVAFCHQCGERAQ 1191
L++L Y FLAALDD+ QHPD+ ++ ++A A EE VA + R +P + + S SGV + P N SA+ AT + + N + + +N RAE A +GV A A E D +G F PDDQRLL+LLQ ++ VNS+A K CSEMEAEG GAR+RA R+EAAA+++QA + RGC+GR+LAREA +R T ++ PGV+ LR C Q F ARTRA+K+A RY+R LD GAEYYFD KTG+SSW KPKILGKF++ +AVVVP EE++VPMC+EC+++ AT +V + C +C GDNFC SCF Y+HR+GR+RRH FEPLV CH CG+RAQ
Sbjct: 68 LSHLPYSSFLAALDDIGTQHPDLRRLADAATAAAQEESVAVLVRAIPGAT-TAVSSLVEADRGSGVGKKS---KRPYNR--SAKGGATSPTNADGKRSRAENSRTPTTEN--------------RAEKAAKLGVRPGAAGAXXXXXXXXXXXXXXXXXXXXXXTAETFEVDYLGGFRPDDQRLLVLLQKYVFVNSQAGKEACSEMEAEGRGARRRALDRLEAAAVVVQACMARGCSGRALAREASGRRELDRHNTRLNWAASLLQTRWMKTHSKTRPGVARFTLRTLFVKIYCMQEQMRAFAARTRAAKMAVKRYYRCLDGLTGAEYYFDPKTGKSSWAKPKILGKFDISTAVVVPAGEEIMVPMCHECAEEV----------------------ATDFQVAVKHCQQC-----GDNFCVSCFAYLHRKGRIRRHTFEPLVGICHDCGDRAQ 472
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: A0A6H5KFP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP2_9PHAE) HSP 1 Score: 210 bits (534), Expect = 1.550e-53 Identity = 183/545 (33.58%), Postives = 252/545 (46.24%), Query Frame = 1 Query: 1885 RPEGGTGIQHKEALQQVSRKAKRAVKNMEEQRRKAEEMAKKAQNELEALVGPFRPRKTVRTTLREGMLMPFVLSVNRGEATARLEKIQGISE-----------------VLHWMPKGRWVRIDR---------PSGGECASVPLPPSCAMGPFVVRGVKDGNGGK-----------------IIREDGVEVEGDAFTFMSFLGFRKRGASVDETHETVGVTMGQYSTDMASKIARAPIGSHCGSHGEESAEK---GSWLHSTTTRT-------TPLLLLNRQWLLPSTSHCRVYAMPLLPFPRKVGPGLSSLKTLMCAAL------GLQVEHAQLSCTNYKCVST------------KLRRTSNYQHEAVQSNKRLQRIGDCKRVVWKEHGRRRKTQGVRACAVIVQILEYLITKPPGTYSRTSFAGMEDHGELKSCLSQQVTIMYRSQRQESEA---VVEFVGHIWIDLDTPTPVLREFIRRFCGAWLNEHAKGERFLMEDSRGILIGRSEEGGRITATAMQMVQERFNKETRNTDYIVFVQIE 3297
R +GG HK+ LQQ SRKAKRAV+N E++R KAEE K A+N LEAL+GPFR R VR + +GMLMPF +S+ +G+A ARLEK Q + E VL WMP GR VR++ P G A P PPS A GPF V GVK+ +E G E A S S+DE VG G+ S A + G + + K S +H+ R + L+L R+ L + P R+V + S+ L L L+V ++ + + V+T L+ +++ A + + D K ++ + GR V+VQ+ + + T +V IM+RS + +E VV+ VG+I +DLDTPTPVLREFIRRFCG WLNEHAKG+ F+MED+ G ++ R+ EGG+ ATAM MVQER NK TR+T+ ++FVQ E
Sbjct: 38 RAKGGVSADHKDELQQNSRKAKRAVQNQEQEREKAEERVKAAENALEALIGPFRLRNNVRAAVTKGMLMPFPVSMQKGKANARLEKGQNMREASDAAICDSVLSCVVCSVLKWMPYGRRVRVEPTDPSSVYFLPEAGTRAC-PRPPSHAFGPFYVVGVKESRQSDKKEKAAATAALALAENLASKEPGDTRERPATGLGSGAAATTPAESIDEGGTAVGADGGEDSLGDLKSHAPSIFGFLNTAFSDREQTKFDDDSNMHARLERWAAGSEAWSKRLMLRRRKLFDVEEGFQ-------PEKRRVMEAVESVLALWTRILQPACRGDLRVWRSRRNMKTDETVATFSLALFGGTLNPSLQEMTDFAKSAAATGLASTQGADGKGIIGGKLGRE----------VVVQLFKKWVQSDDRT---------------------KVIIMHRSGKAANEPAVEVVQVVGYIKVDLDTPTPVLREFIRRFCGGWLNEHAKGDHFVMEDATGTVVRRNREGGKQNATAMDMVQERINKATRDTESVIFVQDE 543
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: A0A1V9Y5M9_9STRA (B box-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5M9_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.050e-19 Identity = 91/319 (28.53%), Postives = 144/319 (45.14%), Query Frame = 1 Query: 739 LARTRASKLAASRYFR*LDEQVGAEYYFDLKTGESSWTKPKILGKFELGSAVVVPPKEEMLVPMCNECSQDFVD--------CDEDMLCTLCDNRMHRAGSSATHLRVVIHMCDECRFQQY----------GDNFCASCFGYVHRRGRLRRHKFEPLVAFCHQCGERAQAVRCFGCHPEGLLLLCKPCQRFKHGNIPINETTTHRVEALGLKSMKAQRLKAERSAHIKKMRMKTESVMMAQKKLDTRRLEKAIKRQTASRGYLARKRRKH-----LISRNSSWRVQ-RLRDDEVRENKIYKLRR*LGNAPLLTSDTDQE 1623
LAR + +L Y ++ + GA+ Y +L TG +++ KP +L ++ +PP +E + C + + VD CD D +C C R H+ + +H V I +C C Q G FC SC+ + HR H F PLVA C +C +A +C C L CK C H RV L +++ + +A +A + ++R+ ESV +L ++ + A + A+ Y A+K R+ + R ++W VQ R +DD VR YKL++ +G A L SDT E
Sbjct: 1047 LARFKFDRLVRDTYVEYVNWKSGAKSYKNLITGTTTYAKPVLLRAMVPNVSIQLPPPDEEYIVYCTKHESEPVDKAAMYCLECD-DAVCLDCYTRDHKRAAFISHESVPIALCCLCSMQTATRACNQCKGGGTPFCDSCYPHYHRE--KPSHNFTPLVALCVECQVKAGCWKCTVCTD----LFCKKCFSIFHRKGQRQHHGIERVPYLPVRAKEILDARAREAARVAQLRVTEESVERQLSELTDKQRDVAARMIQAA--YRAKKERRDGKAYMKLVRRTNWIVQQRAKDDVVRRGVAYKLKKAIGVAQALASDTAAE 1356
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: A0A024UHG5_9STRA (B box-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHG5_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.220e-16 Identity = 91/344 (26.45%), Postives = 150/344 (43.60%), Query Frame = 1 Query: 739 LARTRASKLAASRYFR*LDEQVGAEYYFDLKTGESSWTKPKIL-GKFELGSAVVVPPKEEMLVPMCNECSQD------FVDCDEDMLCTLCDNRMHRAGSSATHLRVVIHMCDEC----------RFQQYGDNFCASCFGYVHRRGRLRRHKFEPLVAFCHQCGERAQAVRCFGCHPEGLLLLCKPC--------QRFKHGNIPINETTTHRVEALGLKSMKAQRLKAERSAHIKKMRMKTESVMMAQKKLDTRRLEKAIKRQTASRGYLARKRRKHLISRNSSWRVQRLRDDEVRENKIYKLRR*LGNAPLLTSDTDQELVLKQYPRWWETTIVDIVIPGIGW 1695
LA+ L + +D + GA Y +L T +++++P +L G S + PP E +V C +Q F E+ +C C R H+A + A H V + MC C + Q +C +C+ + H+ + H F PLV C +CGE+ RC C L CK C QR HG P+ A L+ + ++ +A+ A +++ + E++ + ++++ ++ A + A RG + K + + QRL+DD VR YKLR+ +G AP L SDT E+ Q + D V+ +GW
Sbjct: 1129 LAKLGFQALVCDTFVEYVDWKSGACSYKNLVTNTTTYSRPALLRGLTPSISIRLPPPGEGFIVNCCRHDTQPPDLATMFCMACEEAMCGPCFARDHKANALANHSTVQVQMCRLCSKHTASRVCNQCQGGTVPYCDTCYPHYHK-DKFACHTFTPLVCLCVECGEKVGRWRCTTCTD----LFCKKCFSNFHRKGQRQNHGMEPVPYLAVEAKAAQDLRRREKEQQRAD-MARAEEVARQVEAIELQKREVAAVLIQTAYR---AKRGRVEGKAYMKEVRHTNRMVQQRLKDDVVRSAFTYKLRKVVGLAPTLASDTVDEVHAAQQRK-------DNVVAALGW 1456
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: A0A7S3PQJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQJ7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.810e-15 Identity = 55/179 (30.73%), Postives = 77/179 (43.02%), Query Frame = 1 Query: 799 QVGAEYYFDLKTGESSWTKPKILGKFELGSAVVVPPKEEMLVPMCNECSQDFV-----DCDEDMLCTLCDNRMHRAGSSATHLRVVIHMCDECRFQQY--------GDNFCASCFGYVHRRGRLRRHKFEPLVA-FCHQCGERAQAVRCFGCHPEGLLLLCKPCQRFKHGNIPINETTT 1293
++ Y+F+ KTG +SW KP +L E+ + V +PP+ LV C CS+ + DC E+ C C + H G ATH+ V I C C+FQ D+FC +CF H G H + LV C C RA H + C C + H I + T
Sbjct: 1 EMQTPYWFNPKTGRTSWEKPHVLQDAEVDTVVHIPPERHQLVKYCERCSEKLIKVFCDDC-EEYTCRDCFDSFHTKGKRATHISVSIKTCIHCQFQLATRSCEDCKSDSFCDTCFMKTHESGTWVNHSCKLLVKNICQICESRAST------HSVSESICCSFCVEY-HFRIDLESVYT 171
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: A0A067D624_SAPPC (B box-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D624_SAPPC) HSP 1 Score: 93.2 bits (230), Expect = 2.360e-15 Identity = 88/321 (27.41%), Postives = 145/321 (45.17%), Query Frame = 1 Query: 742 ARTRASKLAASRYFR*LDEQVGAEYYFDLKTGESSWTKPKILGKFELGSAVVVPPKEEMLVPMCNECSQD--------FVDCDEDMLCTLCDNRMHRAGSSATHLRVVIHMCDECRFQQY----------GDNFCASCFGYVHRRGRLRRHKFEPLVAFCHQCGERAQAVRCFGCHPEGLLLLCKPC--------QRFKHGNIPINETTTHRVEALGLKSMKAQRLKAERSAHIKKMRMKTESVMMAQKKLDTRRLEKAIKRQTASRGYLARKRRKHLISRNSSWRVQ-RLRDDEVRENKIYKLRR*LGNAPLLTSDTDQE 1623
AR + L Y ++ + GA+ Y +L TG +++++P +L ++++PP +E + C + ++CD D +C C R H+ + +H + I +C C Q G +C +C+ + HR R H F LVA C +C +A A RC C CK C QR HG + L ++ A RL A+ SA + + + +A++ + R ++ A + A +G + K LI R ++W VQ R++DD VR YKL++ +G A +L SDTD E
Sbjct: 1028 ARLQFDALVRETYVEYVNGKSGAKSYKNLVTGVTTYSRPALLRDMPPTVSILLPPPDEEYIVYCMKHESQPREKATIYCLECD-DAVCADCFARDHKRAAFTSHATLPIELCRLCTTQTATRRCNQCMDGGAPYCDACYPHYHR---TRPHTFTALVALCVECQAKAGAWRCTVCTDY----FCKKCYSNFHRKGQRQHHGIERVAYLPFAAKAILDARATDAARL-AQASAVDSVVSAQLSELDVAKQDIAARMIQAAFR---AMKGRVEGKAYMKLI-RRTNWIVQQRVKDDVVRRGLAYKLKKAIGVAEVLASDTDAE 1335
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: T0RWG0_SAPDV (B box-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RWG0_SAPDV) HSP 1 Score: 91.7 bits (226), Expect = 6.990e-15 Identity = 89/322 (27.64%), Postives = 146/322 (45.34%), Query Frame = 1 Query: 742 ARTRASKLAASRYFR*LDEQVGAEYYFDLKTGESSWTKPKILGKFELGSAVVVPPKEEMLVPMCN---------ECSQDFVDCDEDMLCTLCDNRMHRAGSSATHLRVVIHMCDECRFQ-------QYGDN---FCASCFGYVHRRGRLRRHKFEPLVAFCHQCGERAQAVRCFGCHPEGLLLLCKPC--------QRFKHGNIPINETTTHRVEALGLKSMKAQRLKAERSAHIKKMRMKTESVMMAQKKLDTRRLEKAIKRQTASRGYLARKRRKHLISRNSSWRVQ-RLRDDEVRENKIYKLRR*LGNAPLLTSDTDQE 1623
AR + L Y ++ + GA+ Y +L TG +++++P +L ++ +PP +E + C + + ++CD D +C C R H+ + A+H + I +C C Q Q D +C +C+ + HR R H F PLVA C +C + A RC C CK C QR HG + T L ++ A R +A+ S + + + A++ + R ++ A + A +G + K LI R ++W VQ R++DD VR YKL++ +G A +L SDTD E
Sbjct: 1037 ARLQFDALVRETYVEYVNWKSGAKSYKNLVTGVTTYSRPALLRDMAPNVSIQLPPPDEEYIVYCTLRHESTPSEKATIYCLECD-DAVCADCFARDHKRAAFASHATLPIALCRLCTTQTATRQCNQCIDGHAPYCDACYPHYHR---TRPHTFTPLVALCVECQAKVGAWRCTVCTDY----FCKKCYSSFHRKGQRQHHGIERVAYLPTAAKAILDARANDAAR-RAQASVVNSVVSAQLSELEFAKQDVAARMIQAAFR---AMKGRVEGKSYMKLI-RRTNWIVQQRVKDDVVRSGLAYKLKKAIGVAQVLASDTDAE 1345
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: A0A2R5GT23_9STRA (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GT23_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.100e-14 Identity = 102/387 (26.36%), Postives = 172/387 (44.44%), Query Frame = 1 Query: 577 RAFGRIEAAALLIQAALVRGCAGRSLA---REARKKRTSRQSSPGVSWPLLRCRQGFLARTRASKLAASRYFR*LDEQVGAEYYFDLKTGESSWTKPKILGKFELGSAVVVPPKEEMLVPMCNECSQDF-----VDCDEDMLCTLCDNRMHRAGSSATHLRVVIHMCDECRFQQYGD---------------NFCAS-------CFGYVHRRGRLRRHKFEPLVAFCHQCGERAQAVRCFGCHPEGLLLLCKPCQRFKH--GNIPINETTTHRVEALGLKSMKAQRLKAERSAHIKKMRMKTESVMMAQKKLDTRRLEK-AIKRQTASRGYLARKRRKHLIS-----RNSSWRVQRLRDDEVRENKI-YKLRR*LGNAPLLTSDTDQ 1620
RA R+E A++++Q RG A RS+ RE R + + S + + LA+ R LA + +D + G Y+F+ +TGESSWTKPK+LG E ++V+P K++ V C +C + +DC D C C + H + T++ + + +F + C + +L HK++PL+ C +C RA RC C + C C + H GN ++ +L L+ ++ ++++A++ A +K R K VM Q + D +EK A+K Q+ RG R K L+ WR+ ++ D K+ Y+L+ +G AP+L +D D+
Sbjct: 607 RAARRMEWASVMVQRRF-RGVASRSILDRIREQRHREIEAERQRAASTLIQTFWRMCLAKRRVRALARRCLQKCIDAETGDPYWFNTQTGESSWTKPKLLGNDEAEVSIVMPQKDDEFVIKCAKCRAEMATVACLDC-ADPFCEDCHRQEHHGATMHTNIPIPLXXXXXXXXXXXXXXXXXXXXXXXXXEMAHFISPPWQDEPVCAQPSEEQSQLAAHKWQPLIKVCAECDARAVRWRCEECGDD----FCARCLKDLHRKGNRRLHNFHPLSYHSLQLE-VRERQVRAKKRAIAEKERRK---VMQKQAEQDN--MEKVALKLQSLYRGRRDRAVGKSLLRDARLRERKHWRL--VKHDMAERKKLNYRLQAAVGIAPILETDDDE 979
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Match: A0A6G0XWG8_9STRA (B box-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWG8_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.570e-12 Identity = 79/321 (24.61%), Postives = 143/321 (44.55%), Query Frame = 1 Query: 739 LARTRASKLAASRYFR*LDEQVGAEYYFDLKTGESSWTKPKILGKFELGSAVVVPPKEEMLVPMC--------NECSQDFVDCDEDMLCTLCDNRMHRAGSSATHLRVVIHMCDECRFQ-------QYGDN---FCASCFGYVHRRGRLRRHKFEPLVAFCHQCGERAQAVRCFGCHP----EGLLLLCKPCQRFKHGNIPINETTTHRVEALGLKSMKAQRLKAERSAHIKKMRMKTESVMMAQKKLDTRRLEKAIKRQTASRGY---LARKRRKHLISRNSSWRVQRLRDDEVRENKIYKLRR*LGNAPLLTSDTDQEL 1626
+A+ + + + +D + GA Y +L T +++ +P ILG ++ +PP E + C + + ++C+E M C+ C R H+ + A H + I MC C Q Q D +C +C+ + H+ + H F LV C +CG++ +C C + + QR H + ++ A + ++L+A AH +++ + + + + ++++ AI QTA RG +A K I + QRL+DD +R YKLR+ +G AP+L SDT +E+
Sbjct: 1047 MAKLKFQSIVCDAFVEYVDWKSGARSYKNLITNTTTFGRPAILGGLSPSVSIKMPPPGEEYLAYCLRHETKPADLATLYCLECEEAM-CSYCFERDHKRKAFADHASLPIFMCSLCSKQTASRTCNQCHDGHVPYCDTCYPHFHKNKNVN-HTFVALVTLCVECGDKVGRWQCTTCTDFFCKKDFSAFHRKGQRQNHEMLAVSYLPLEAKAAQDRRLRDKEQLEA---AHDQEVSREVQQLELQKQEVA------AIIIQTAYRGMRDRIAGKSYMKTIRYTNRMMQQRLKDDVIRSAFTYKLRKAVGFAPILASDTAEEV 1356 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100.47.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100.47.1 >prot_P-canaliculata_contig100.47.1 ID=prot_P-canaliculata_contig100.47.1|Name=mRNA_P-canaliculata_contig100.47.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=529bp MVREQVFFFNNSRRRGRWAILEGRLRLINARWLLRRMERKQLGRDAFYARback to top mRNA from alignment at P-canaliculata_contig100:13194..29501+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig100.47.1 ID=mRNA_P-canaliculata_contig100.47.1|Name=mRNA_P-canaliculata_contig100.47.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=16308bp|location=Sequence derived from alignment at P-canaliculata_contig100:13194..29501+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig100:13194..29501+ >mRNA_P-canaliculata_contig100.47.1 ID=mRNA_P-canaliculata_contig100.47.1|Name=mRNA_P-canaliculata_contig100.47.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3174bp|location=Sequence derived from alignment at P-canaliculata_contig100:13194..29501+ (Pelvetia canaliculata dioecious)back to top |