mRNA_M-pyrifera_M_contig124471.4979.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A1W2G6N9_9BACT (Cytochrome c-type biogenesis protein CcsB n=2 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G6N9_9BACT) HSP 1 Score: 279 bits (713), Expect = 5.100e-85 Identity = 134/170 (78.82%), Postives = 153/170 (90.00%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
EDS FVR+I+PMYYQSIM+S+ EKDW+ ADE LGY+K YQ IKGA+V+PE+GI+ AELLYNKLKLFNHLF +LWL+G+ALL VAIL+IFKSES+ I +S VLT LVF F+ LTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAF+FYKKSNFVVPLGALF+GTLL
Sbjct: 675 EDSTFVRRILPMYYQSIMESVREKDWAKADEVLGYIKKYQNIKGAEVLPESGIVKAELLYNKLKLFNHLFGYLWLSGIALLAVAILKIFKSESRGINIASNVLTGLVFVQFLALTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFIFYKKSNFVVPLGALFSGTLL 844
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A1M6LQ94_9BACT (Cytochrome c-type biogenesis protein CcsB n=4 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6LQ94_9BACT) HSP 1 Score: 227 bits (578), Expect = 5.400e-66 Identity = 109/170 (64.12%), Postives = 136/170 (80.00%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
EDSVFV++IMPMYYQS++++ +KDW+ ADETL Y++T+Q +KGA V+P + I AELLYNKL+LFNHLFSF WLTG+ALL VAI +F + ++ S LTA+VF GF+ LTFNL LRWYA+ + PWSNGYEMIILV W L+ F F FY+KS+FVVPL ALFAGTLL
Sbjct: 674 EDSVFVKRIMPMYYQSVLKASRDKDWTQADETLSYIRTFQNVKGAAVIPSSNIQRAELLYNKLRLFNHLFSFFWLTGIALLAVAIFSVFYPNNSLVDKSKIGLTAVVFVGFLALTFNLILRWYAAQYPPWSNGYEMIILVSWALMLFGFSFYRKSDFVVPLAALFAGTLL 843
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI000D6E2CCE (cytochrome c biogenesis protein CcsA n=1 Tax=Reichenbachiella versicolor TaxID=1821036 RepID=UPI000D6E2CCE) HSP 1 Score: 175 bits (444), Expect = 1.100e-47 Identity = 89/173 (51.45%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSI---MQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
EDS+FV I+P+YY+S+ +S S++DW AD+ LGY+ TYQ + G +V P G ELLYN+L LF LF W+ GL L ++IL++F ++SK I+ S VL + F+ TFN+ LRWYA + PWSNGYEMIILV W L+ F FVF KKS+FV+PL LF GTLL
Sbjct: 664 EDSLFVASIIPIYYRSVWMAQKSGSDEDWEQADQNLGYIATYQDVLGKEVSPSEGRRKGELLYNELNLFTKLFPIYWMLGLVALVLSILKVFYNKSKFIKVSLWVLVGAISLAFLAQTFNIILRWYAGDYPPWSNGYEMIILVSWFLMLFGFVFLKKSDFVLPLACLFTGTLL 836
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A6N6KDN0_9BACT (Cytochrome C biogenesis protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6N6KDN0_9BACT) HSP 1 Score: 168 bits (426), Expect = 2.980e-45 Identity = 87/170 (51.18%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
EDS+FVR IMP YY SI ++ + DWS A + L Y+ TYQ + GA+V+P + AEL YN+L LFN LF WL G LL +A+LR+F +K I ++ L L GF+ TFNL LRWYA + PWSNGYEM ILV W L+ F VF +K++F VPL LF+GTL+
Sbjct: 672 EDSLFVRGIMPEYYASIDRAQASGDWSEAMKNLEYIHTYQQVIGAEVIPPPKRVAAELWYNELGLFNKLFPVYWLLGTFLLILAVLRVFFYNNKGINYTYVALIVLAGLGFIAHTFNLALRWYAGDYPPWSNGYEMTILVSWFLMLFGLVFMRKTDFAVPLAVLFSGTLM 841
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI00040F1F9D (cytochrome c biogenesis protein CcsA n=1 Tax=Algoriphagus mannitolivorans TaxID=226504 RepID=UPI00040F1F9D) HSP 1 Score: 163 bits (412), Expect = 2.280e-43 Identity = 77/170 (45.29%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
ED +FV+ I PMY Q++++ L DW+ A+ETL Y+ YQ G +V P +I AELLY ++ L N LF W+ G+ +L + I+R+FK ESK +E + + T L + G+ TF+L LRW+ + H PWS+G+EM++ V WG+LFF VF KS F +PL +F+GTLL
Sbjct: 657 EDGIFVKNIGPMYLQALLEGLESGDWTQAEETLSYIDLYQRKAGEEVYPNQTLIDAELLYTQINLGNRLFGAFWILGVLMLIIGIIRLFK-ESKILENTFKFGTLLAWIGWFTFTFHLALRWFIAKHPPWSDGFEMLVFVAWGILFFGLVFSSKSRFTIPLALIFSGTLL 825
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A0D3L8Q9_9BACT (ABC transporter involved in cytochrome c biogenesis permease n=1 Tax=Flammeovirgaceae bacterium 311 TaxID=1257021 RepID=A0A0D3L8Q9_9BACT) HSP 1 Score: 163 bits (412), Expect = 2.290e-43 Identity = 80/170 (47.06%), Postives = 110/170 (64.71%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
ED +FV+ I P+Y ++++ S DW ADE L Y+ YQ G +V P + AEL YNKL L N LF WL G+ ++ +AI+++F S K + +S AL +AGF TF+L LRWY +GHAPWS+G+EM+I V WG+L F +F +S+F VPLG LF+GTLL
Sbjct: 666 EDGMFVKNITPLYMSALLKGTSSGDWQEADEILNYINLYQQKAGVNVYPSQNQLKAELFYNKLNLGNRLFGMFWLLGIFMMGLAIVKLF-STPKWLNYSWSTGLALAWAGFSAFTFHLALRWYIAGHAPWSDGFEMLIFVAWGVLLFGLLFGNRSHFTVPLGVLFSGTLL 834
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: A0A3Q9FS29_9BACT (Cytochrome C biogenesis protein n=2 Tax=Flammeovirga TaxID=59739 RepID=A0A3Q9FS29_9BACT) HSP 1 Score: 162 bits (411), Expect = 3.120e-43 Identity = 80/170 (47.06%), Postives = 110/170 (64.71%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
EDS FVR IM +YY I ++ S DW+ A+ L YV+T+Q + G ++ IT+EL YNKL +FN+LF WL G+ LL +A+L++FK+ SK + F TFNL LRWY + + PW+NGYEM+ILV W L F F+FY+KS+F++PL +LF GTLL
Sbjct: 676 EDSAFVRNIMKVYYMEIFKARSSDDWTDAELNLSYVRTFQKVMGKEIYLSDQAITSELWYNKLNIFNNLFPIYWLLGVYLLVIALLKVFKN-SKGTRLAYNFGVGFEMVAFFAFTFNLILRWYIAQYPPWTNGYEMLILVAWSLFLFGFIFYRKSDFILPLVSLFGGTLL 844
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI0016462609 (cytochrome c biogenesis protein CcsA n=1 Tax=Echinicola salinicaeni TaxID=2762757 RepID=UPI0016462609) HSP 1 Score: 162 bits (409), Expect = 5.790e-43 Identity = 83/172 (48.26%), Postives = 114/172 (66.28%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSES--KAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
ED++FV+ I +Y Q + L+ DWS A+E+LGY+ +Q GADV P+ + AELLY KL L N LF WL G+ +L +AI ++F + S KA+ +LT + GF++ TF+LGLRWY + H PWS+G+EM++ VGWG+L F VF KS F VPLG LF+GTLL
Sbjct: 659 EDALFVKNITNIYLQGLQNGLNTGDWSKAEESLGYIDLFQQKAGADVYPDEKRVNAELLYTKLNLGNRLFGVFWLLGIIMLVLAIWQMFSTTSLNKALWKIGLLLTGI---GFLVFTFHLGLRWYIAQHPPWSDGFEMLVFVGWGVLLFGLVFSGKSKFTVPLGLLFSGTLL 827
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI001BFCCA39 (cytochrome c biogenesis protein CcsA n=1 Tax=Echinicola shivajiensis TaxID=1035916 RepID=UPI001BFCCA39) HSP 1 Score: 161 bits (407), Expect = 1.080e-42 Identity = 83/171 (48.54%), Postives = 111/171 (64.91%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSES-KAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
ED++FV+ I +Y Q + L+ DWS A+E+LGY+ +Q GADV P+ + AELLY +L L N LF WL GL +L +AI ++F+ S W +L L GF + TF+LGLRWY + H PWS+G+EM++ VGWG+LFF VF KS F VPLG LF+GTLL
Sbjct: 659 EDALFVKNITNIYLQGLKDGLNTGDWSKAEESLGYIDLFQQKAGADVYPDEKRVNAELLYTELNLGNRLFGLFWLLGLVMLLLAIWQMFRINSLNTTLWKIGLL--LTGLGFFVFTFHLGLRWYIAQHPPWSDGFEMLVFVGWGVLFFGLVFSGKSKFTVPLGLLFSGTLL 827
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Match: UPI001CD2B53B (cytochrome c biogenesis protein CcsA n=1 Tax=Cesiribacter sp. SM1 TaxID=2861196 RepID=UPI001CD2B53B) HSP 1 Score: 161 bits (407), Expect = 1.080e-42 Identity = 78/170 (45.88%), Postives = 111/170 (65.29%), Query Frame = 1
Query: 1 EDSVFVRKIMPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLYNKLKLFNHLFSFLWLTGLALLTVAILRIFKSESKAIEWSSRVLTALVFAGFMLLTFNLGLRWYASGHAPWSNGYEMIILVGWGLLFFAFVFYKKSNFVVPLGALFAGTLL 510
ED +FV+ I P+Y ++++ S +W ADE L Y+ YQ G +V P + AEL YN++ L N LF WL G+ +L +AI+++F S K +++S L +AGFM TF+L LRWY +GHAPWS+G+EM+I V WG+L F +F +S+F VPLG LF+GTLL
Sbjct: 665 EDGMFVKNITPLYMSALLKGTSTGNWQEADEILNYINLYQQKAGINVYPSQNQLKAELFYNQMNLGNRLFGMFWLLGIGMLGLAIVKLF-STPKWLDYSWSTGLVLAWAGFMAFTFHLALRWYIAGHAPWSDGFEMLIFVAWGVLLFGLLFGNRSHFTVPLGVLFSGTLL 833 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124471.4979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124471.4979.1 >prot_M-pyrifera_M_contig124471.4979.1 ID=prot_M-pyrifera_M_contig124471.4979.1|Name=mRNA_M-pyrifera_M_contig124471.4979.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp MPMYYQSIMQSLSEKDWSTADETLGYVKTYQGIKGADVMPEAGIITAELLback to top mRNA from alignment at M-pyrifera_M_contig124471:8..517+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124471.4979.1 ID=mRNA_M-pyrifera_M_contig124471.4979.1|Name=mRNA_M-pyrifera_M_contig124471.4979.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig124471:8..517+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124471:8..517+ >mRNA_M-pyrifera_M_contig124471.4979.1 ID=mRNA_M-pyrifera_M_contig124471.4979.1|Name=mRNA_M-pyrifera_M_contig124471.4979.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig124471:8..517+ (Macrocystis pyrifera P11B4 male)back to top |