mRNA_M-pyrifera_M_contig124431.4965.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig124431.4965.1
Unique NamemRNA_M-pyrifera_M_contig124431.4965.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: A0A0H5RFB8_9EUKA (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RFB8_9EUKA)

HSP 1 Score: 114 bits (285), Expect = 3.850e-30
Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 1 
Query:    1 MSEGTRRRKNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            ++   R  K+ T  FD VF   +TQ++VY  T   L+  V +G N+TVFAYGATG+GKT TM+G +  GPGVM+ +MRD+FE + A   + EC+V +SY+EVYNEE  DLL
Sbjct:   46 LTSSRRPHKDTTFAFDCVFGHNATQQQVYNNTGRVLVNSVFDGFNSTVFAYGATGSGKTCTMVGDTFIGPGVMILSMRDIFEHIQANMSDLECRVQLSYLEVYNEEIKDLL 156
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: A0A852L971_UROIN (Kinesin-like protein (Fragment) n=1 Tax=Urocolius indicus TaxID=458196 RepID=A0A852L971_UROIN)

HSP 1 Score: 118 bits (296), Expect = 9.390e-29
Identity = 60/103 (58.25%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:   25 KNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            K+LT  FD+VF EG+TQEEV++ T   L+  VL G N +VFAYGATGAGKTHTM+GS  S PG+M + M +L+ +++A +EE  C+VLVSY EVYNE+  DLL
Sbjct:   62 KDLTFVFDRVFGEGATQEEVFQHTTRGLLDSVLGGYNCSVFAYGATGAGKTHTMLGSESS-PGIMYRTMAELYSRIEARKEEKSCEVLVSYQEVYNEQIHDLL 163
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: UPI001CF1E5A8 (kinesin-like protein KIF18A n=1 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF1E5A8)

HSP 1 Score: 115 bits (288), Expect = 6.110e-28
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 1 
Query:   16 RRRKNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            R+ K+L   FD VFD+ STQ+EV+  T   +I  VL G N TV AYGATGAGKTHTM+GSSG  PGVM   M DL+ ++++++EE  C V VSY+EVYNE+  DLL
Sbjct:   67 RKNKDLKFVFDCVFDDNSTQQEVFEQTTRVVIDGVLNGYNCTVLAYGATGAGKTHTMLGSSGQ-PGVMYLTMMDLYNRIESLKEEKVCNVAVSYLEVYNEQIRDLL 171
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: A0A8C5PEU1_9ANUR (Kinesin-like protein n=3 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PEU1_9ANUR)

HSP 1 Score: 116 bits (290), Expect = 6.480e-28
Identity = 59/110 (53.64%), Postives = 84/110 (76.36%), Query Frame = 1 
Query:    7 EGTRRR-KNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            +GTRR+ K+L   FD+VF E +TQ++V+  T   ++  VL G N +VFAYGATGAGKTHTM+G++ S PGVM   M +L+ +++A+QEE +C+VL+SY+EVYNE+  DLL
Sbjct:   62 DGTRRKGKDLKFIFDRVFGENATQQDVFEHTTKEILDGVLNGYNCSVFAYGATGAGKTHTMLGTANS-PGVMYLTMVELYRRIEAIQEEKQCEVLISYLEVYNEQIQDLL 170
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: UPI001AACDE58 (kinesin-like protein KIF18B n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AACDE58)

HSP 1 Score: 116 bits (290), Expect = 6.490e-28
Identity = 61/110 (55.45%), Postives = 83/110 (75.45%), Query Frame = 1 
Query:    7 EGTRRR-KNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            EG RR+ K+L   FD+VF E STQ+EV+  T  P+I  VL G N +VFAYGATGAGKTHTM+GS+ + PGVM   M +L+++++A++EE  C+V +SY+EVYNE+  DLL
Sbjct:   62 EGNRRKGKDLKFIFDRVFGEDSTQQEVFEHTTKPIIDGVLNGYNCSVFAYGATGAGKTHTMLGSA-TDPGVMYLTMVELYQRIEAIKEEKSCEVGISYLEVYNEQIQDLL 170
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: K7FZN2_PELSI (Kinesin motor domain-containing protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FZN2_PELSI)

HSP 1 Score: 110 bits (276), Expect = 7.110e-28
Identity = 56/106 (52.83%), Postives = 79/106 (74.53%), Query Frame = 1 
Query:   16 RRRKNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            R+ K+L   FD+VF E +TQE+V++ T   ++  VL G N +VFAYGATGAGKT+TM+GS  S PG+M   M +L+++++AM+EE  C+VL+SY EVYNE+  DLL
Sbjct:   66 RKGKDLKFVFDQVFGESATQEDVFQHTTKEILDGVLNGYNCSVFAYGATGAGKTYTMLGSERS-PGIMFLTMVELYKRIEAMKEEKSCEVLISYQEVYNEQIHDLL 170
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: UPI001ABDB5FE (kinesin-like protein KIF18A n=2 Tax=Bufo TaxID=8383 RepID=UPI001ABDB5FE)

HSP 1 Score: 115 bits (289), Expect = 8.880e-28
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 1 
Query:   16 RRRKNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            R+ K+L   FD VFD+ STQ+EV+  T   +I  VL G N TV AYGATGAGKTHTM+GSSG  PGVM   M DL+ ++++++EE  C V VSY+EVYNE+  DLL
Sbjct:   67 RKNKDLKFVFDGVFDDNSTQQEVFEQTTRVVIDGVLNGYNCTVLAYGATGAGKTHTMLGSSGQ-PGVMYLTMMDLYNRIESLKEEKVCNVAVSYLEVYNEQIRDLL 171
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: A0A4P9WJ86_9FUNG (Kinesin-like protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WJ86_9FUNG)

HSP 1 Score: 111 bits (278), Expect = 1.100e-27
Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 1 
Query:   10 GTRRRKNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            G+RR K +  GFD VF E ++Q++V+  TA+PLIP VL+G NATVFAYGATG GKTHT+ G+  S PG++   MR+LF Q++A    +  +  VSY+EVYNE   DLL
Sbjct:    2 GSRRNKEVRYGFDVVFKESASQKDVFTGTASPLIPLVLDGFNATVFAYGATGCGKTHTITGTP-SDPGIIFLTMRELFAQIEARSAHHVIESSVSYLEVYNETIRDLL 108
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: A0A7K4M222_9AVES (Kinesin-like protein (Fragment) n=1 Tax=Crypturellus undulatus TaxID=48396 RepID=A0A7K4M222_9AVES)

HSP 1 Score: 115 bits (288), Expect = 1.180e-27
Identity = 60/105 (57.14%), Postives = 79/105 (75.24%), Query Frame = 1 
Query:   19 RRKNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            R K+LT  FD+VF EG+TQEEV++ T   L+  VL G N +VFAYGATGAGKT+TM+GS  S PG+M   M +L+++++A +EE  C+VLVSY EVYNE+  DLL
Sbjct:   65 RGKDLTFVFDRVFGEGATQEEVFQHTTRDLLDGVLSGYNCSVFAYGATGAGKTYTMLGSEES-PGIMYLTMVELYKRIEARKEEKSCEVLVSYQEVYNEQIHDLL 168
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BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Match: D8PKV9_SCHCM (Kinesin-like protein (Fragment) n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PKV9_SCHCM)

HSP 1 Score: 113 bits (283), Expect = 1.390e-27
Identity = 56/111 (50.45%), Postives = 81/111 (72.97%), Query Frame = 1 
Query:    1 MSEGTRRRKNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFAYGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYMEVYNEERGDLL 333
            M  GT+R K+    FD+VFD  + Q++VY ATA PL+  +L+G NATVFAYGATG GKTHT+ G+  S PG++   M DLF++++  +E+Y  +V+V+++E+YNEE  DLL
Sbjct:   82 MPPGTKRYKDKRFMFDRVFDHEARQQDVYDATARPLLKGLLDGYNATVFAYGATGCGKTHTISGTE-SDPGIIYLTMADLFQRIEERKEDYNVEVMVTFLEIYNEEIRDLL 191
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124431.4965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0H5RFB8_9EUKA3.850e-3050.45Kinesin motor domain-containing protein (Fragment)... [more]
A0A852L971_UROIN9.390e-2958.25Kinesin-like protein (Fragment) n=1 Tax=Urocolius ... [more]
UPI001CF1E5A86.110e-2856.60kinesin-like protein KIF18A n=1 Tax=Bufo gargariza... [more]
A0A8C5PEU1_9ANUR6.480e-2853.64Kinesin-like protein n=3 Tax=Leptobrachium leishan... [more]
UPI001AACDE586.490e-2855.45kinesin-like protein KIF18B n=1 Tax=Rana temporari... [more]
K7FZN2_PELSI7.110e-2852.83Kinesin motor domain-containing protein n=1 Tax=Pe... [more]
UPI001ABDB5FE8.880e-2856.60kinesin-like protein KIF18A n=2 Tax=Bufo TaxID=838... [more]
A0A4P9WJ86_9FUNG1.100e-2753.70Kinesin-like protein (Fragment) n=1 Tax=Blyttiomyc... [more]
A0A7K4M222_9AVES1.180e-2757.14Kinesin-like protein (Fragment) n=1 Tax=Crypturell... [more]
D8PKV9_SCHCM1.390e-2750.45Kinesin-like protein (Fragment) n=1 Tax=Schizophyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124431contigM-pyrifera_M_contig124431:130..462 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score117.5
Seed ortholog evalue4.1e-24
Seed eggNOG ortholog28377.ENSACAP00000007344
Preferred nameKIF18B
KEGG koko:K10401
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000226,GO:0000235,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005871,GO:0005874,GO:0005875,GO:0005876,GO:0005881,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007019,GO:0007049,GO:0007059,GO:0008092,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019894,GO:0022402,GO:0022411,GO:0031109,GO:0031974,GO:0031981,GO:0032984,GO:0032991,GO:0035371,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043624,GO:0043933,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0048285,GO:0050789,GO:0050794,GO:0051261,GO:0051276,GO:0051302,GO:0065007,GO:0070013,GO:0071840,GO:0097435,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140014,GO:1903047,GO:1990752
EggNOG free text desc.Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
EggNOG OGs38B6U@33154,3BADB@33208,3CZTI@33213,48197@7711,48X8D@7742,COG5059@1,KOG0242@2759
COG Functional cat.Z
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Exons1
Model size333
Cds size333
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815761.576328-CDS-M-pyrifera_M_contig124431:129..4621622815761.576328-CDS-M-pyrifera_M_contig124431:129..462Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124431 130..462 +
1692277557.1630416-CDS-M-pyrifera_M_contig124431:129..4621692277557.1630416-CDS-M-pyrifera_M_contig124431:129..462Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig124431 130..462 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124431.4965.1prot_M-pyrifera_M_contig124431.4965.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig124431 130..462 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig124431.4965.1

>prot_M-pyrifera_M_contig124431.4965.1 ID=prot_M-pyrifera_M_contig124431.4965.1|Name=mRNA_M-pyrifera_M_contig124431.4965.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
MSEGTRRRKNLTLGFDKVFDEGSTQEEVYRATAAPLIPDVLEGINATVFA
YGATGAGKTHTMIGSSGSGPGVMVQAMRDLFEQVDAMQEEYECKVLVSYM
EVYNEERGDLL
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mRNA from alignment at M-pyrifera_M_contig124431:130..462+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig124431.4965.1 ID=mRNA_M-pyrifera_M_contig124431.4965.1|Name=mRNA_M-pyrifera_M_contig124431.4965.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=333bp|location=Sequence derived from alignment at M-pyrifera_M_contig124431:130..462+ (Macrocystis pyrifera P11B4 male)
ATGTCCGAGGGCACTCGCCGCAGGAAGAACCTCACACTGGGATTCGACAA
GGTGTTTGACGAAGGCAGCACTCAAGAAGAGGTCTATCGCGCGACGGCAG
CGCCGCTCATTCCCGACGTACTGGAGGGGATCAACGCCACCGTCTTTGCA
TATGGAGCCACAGGCGCTGGAAAGACCCACACAATGATTGGAAGCAGCGG
AAGCGGCCCTGGAGTGATGGTCCAGGCCATGAGAGACCTCTTCGAGCAAG
TGGATGCGATGCAAGAGGAGTACGAGTGTAAGGTGCTCGTCAGCTACATG
GAGGTCTACAACGAGGAGAGGGGAGACCTCCTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig124431:130..462+

>mRNA_M-pyrifera_M_contig124431.4965.1 ID=mRNA_M-pyrifera_M_contig124431.4965.1|Name=mRNA_M-pyrifera_M_contig124431.4965.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig124431:130..462+ (Macrocystis pyrifera P11B4 male)
ATGTCCGAGGGCACTCGCCGCAGGAAGAACCTCACACTGGGATTCGACAA
GGTGTTTGACGAAGGCAGCACTCAAGAAGAGGTCTATCGCGCGACGGCAG
CGCCGCTCATTCCCGACGTACTGGAGGGGATCAACGCCACCGTCTTTGCA
TATGGAGCCACAGGCGCTGGAAAGACCCACACAATGATTGGAAGCAGCGG
AAGCGGCCCTGGAGTGATGGTCCAGGCCATGAGAGACCTCTTCGAGCAAG
TGGATGCGATGCAAGAGGAGTACGAGTGTAAGGTGCTCGTCAGCTACATG
GAGGTCTACAACGAGGAGAGGGGAGACCTCCTTATGTCCGAGGGCACTCG
CCGCAGGAAGAACCTCACACTGGGATTCGACAAGGTGTTTGACGAAGGCA
GCACTCAAGAAGAGGTCTATCGCGCGACGGCAGCGCCGCTCATTCCCGAC
GTACTGGAGGGGATCAACGCCACCGTCTTTGCATATGGAGCCACAGGCGC
TGGAAAGACCCACACAATGATTGGAAGCAGCGGAAGCGGCCCTGGAGTGA
TGGTCCAGGCCATGAGAGACCTCTTCGAGCAAGTGGATGCGATGCAAGAG
GAGTACGAGTGTAAGGTGCTCGTCAGCTACATGGAGGTCTACAACGAGGA
GAGGGGAGACCTCCTT
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