prot_M-pyrifera_M_contig12384.4878.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12384.4878.1
Unique Nameprot_M-pyrifera_M_contig12384.4878.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length139
Homology
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: D8LF37_ECTSI (S1 motif domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF37_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 5.720e-82
Identity = 126/137 (91.97%), Postives = 130/137 (94.89%), Query Frame = 0
Query:    2 VSQPQRARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 138
            VSQP+RARAADQVIQVGD +MGRVTRI TRQA VEIICVGETVLRE HRGI+RKEDIRATEVDKAEV+ SL PGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTT EKEPRKCAKPV
Sbjct:   54 VSQPKRARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A835YI70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI70_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.270e-55
Identity = 86/129 (66.67%), Postives = 108/129 (83.72%), Query Frame = 0
Query:   10 AADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKS-AAGAIMIPISWQEMQCPTTNEKEPRKCAKP 137
            A DQVI+VGD++M RVTR+    ASVEI+C GETVLRE++ GII+KED+RATEVD+ ++  S  PGDI+RARV SLGD+ QY+L+TA  +LGVRWAKS A+GAIM+P+SWQEMQCP T  +EPRKCA+P
Sbjct:   61 AQDQVIEVGDVVMARVTRVRALLASVEILCAGETVLREAYNGIIKKEDVRATEVDRVDMGQSFRPGDIVRARVSSLGDARQYYLTTAAPDLGVRWAKSDASGAIMVPVSWQEMQCPVTGVREPRKCARP 189          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: H6WBA8_VAULI (S1 motif domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA8_VAULI)

HSP 1 Score: 155 bits (392), Expect = 1.810e-45
Identity = 72/125 (57.60%), Postives = 97/125 (77.60%), Query Frame = 0
Query:   13 QVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKP 137
            Q+++VG ++MGRVTR+    ASV+I+C G+ VLRE  +GIIRKED+R+TEVDK ++     PGDI+R +VISLG+S  YFLST+  +LGV WA+S AG +++PISW++MQCP T   E RKCAKP
Sbjct:   61 QILEVGVVVMGRVTRVKNNLASVDILCAGKFVLREICQGIIRKEDVRSTEVDKVDMWKCFRPGDIVRTKVISLGNSRDYFLSTSGEDLGVSWARSEAGEVLVPISWEQMQCPKTKAVEFRKCAKP 185          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A2R6WRL2_MARPO (S1 motif domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WRL2_MARPO)

HSP 1 Score: 149 bits (375), Expect = 1.800e-43
Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 0
Query:    7 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 138
            R +    V + G ++  ++T++  RQA+  I+CVG   +R+   GIIR++D+RATE+DK ++ TS  PGDI+RA VISLGDS  Y+LSTA+NELGV  A S AGA M+P+SWQEMQCP T ++EPRK AK +
Sbjct:   16 REKERGAVPEPGTVVTAKITKLFPRQAAASIVCVGPRAVRDKFTGIIRQQDVRATEIDKVDMHTSFRPGDIVRAEVISLGDSRAYYLSTAKNELGVVSATSDAGAAMVPVSWQEMQCPITGQREPRKVAKVI 147          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: D8S0J7_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S0J7_SELML)

HSP 1 Score: 149 bits (377), Expect = 4.040e-43
Identity = 70/132 (53.03%), Postives = 95/132 (71.97%), Query Frame = 0
Query:    7 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 138
            R +  D V + G  +  ++T++  R AS +I+CVG   ++E   GI+R++D+R TE+DK ++ +S  PGDIIRA VISLGDS  Y+LSTA+NELGV  A S AGA M+ +SWQEMQCP TN++EPRK AK V
Sbjct:   62 REKERDAVPEAGSTVTAKITKVQARMASADIVCVGPRAVKEKFTGIVRQQDVRLTEIDKVDMHSSFRPGDIIRAEVISLGDSRAYYLSTAKNELGVVSAVSVAGATMVAVSWQEMQCPLTNQREPRKVAKVV 193          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A2R6WRL8_MARPO (S1 motif domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WRL8_MARPO)

HSP 1 Score: 149 bits (375), Expect = 6.810e-43
Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 0
Query:    7 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 138
            R +    V + G ++  ++T++  RQA+  I+CVG   +R+   GIIR++D+RATE+DK ++ TS  PGDI+RA VISLGDS  Y+LSTA+NELGV  A S AGA M+P+SWQEMQCP T ++EPRK AK +
Sbjct:   60 REKERGAVPEPGTVVTAKITKLFPRQAAASIVCVGPRAVRDKFTGIIRQQDVRATEIDKVDMHTSFRPGDIVRAEVISLGDSRAYYLSTAKNELGVVSATSDAGAAMVPVSWQEMQCPITGQREPRKVAKVI 191          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A176WMU3_MARPO (S1 motif domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WMU3_MARPO)

HSP 1 Score: 149 bits (377), Expect = 3.510e-42
Identity = 71/132 (53.79%), Postives = 96/132 (72.73%), Query Frame = 0
Query:    7 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV 138
            R +    V + G ++  ++T++  RQA+  I+CVG   +R+   GIIR++D+RATE+DK ++ TS  PGDI+RA VISLGDS  Y+LSTA+NELGV  A S AGA M+P+SWQEMQCP T ++EPRK AK V
Sbjct:   60 REKERGAVPEPGTVVTAKITKLFPRQAAASIVCVGPRAVRDKFTGIIRQQDVRATEIDKVDMHTSFRPGDIVRAEVISLGDSRAYYLSTAKNELGVVSATSDAGAAMVPVSWQEMQCPITGQREPRKVAKEV 191          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A2P5BB28_PARAD (Exosome complex component CSL n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5BB28_PARAD)

HSP 1 Score: 145 bits (367), Expect = 1.440e-41
Identity = 71/128 (55.47%), Postives = 96/128 (75.00%), Query Frame = 0
Query:    9 RAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAK 136
            RA   V + G I++ RVTR+  R AS +I+CVG   ++E   G+IR++D+RATE+DK ++ +S  PGDI+RA V+SLGD+  Y+LSTA+NELGV  A+SAAGA M+PISW EMQCP+T + E RK AK
Sbjct:   70 RANGAVPEPGSIVIARVTRVMARMASADIMCVGAKSMKEKFSGVIRQQDVRATEIDKVDMHSSFRPGDIVRALVLSLGDARAYYLSTAKNELGVLSAESAAGATMVPISWTEMQCPSTGQIEHRKVAK 197          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A8H7EMR4_9FUNG (S1 motif domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EMR4_9FUNG)

HSP 1 Score: 145 bits (366), Expect = 1.480e-41
Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 0
Query:    7 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKP 137
            R +    V +VG +I G+V R+D ++A + I+ VGET  +E   G IR +D+RA E DK ++  S  PGDI+RA VISLGD+  YFLSTA+NELGV +A S AGA MIPISWQEMQCP T   E RKCAKP
Sbjct:   58 REKEQSAVPEVGSVITGKVIRVDPQRAVIAIMVVGETPCKEDFMGSIRVQDVRAAEKDKVKIYQSFRPGDIVRAEVISLGDARSYFLSTAKNELGVIFATSVAGATMIPISWQEMQCPKTKAIEYRKCAKP 188          
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Match: A0A397V822_9GLOM (S1 motif domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V822_9GLOM)

HSP 1 Score: 145 bits (366), Expect = 1.820e-41
Identity = 73/131 (55.73%), Postives = 93/131 (70.99%), Query Frame = 0
Query:    7 RARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHRGIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKP 137
            R +    V  VG II G+V R+ T++A V I+ VG    ++  +GIIR +D+RATE DK ++  S   GDI+RA VISLGD+  Y+LSTA+NELGV +A+S AGA+MIPISWQEMQC  T   EPRKCAKP
Sbjct:   59 REKVHSAVPDVGSIITGKVIRMTTKEAVVSIMVVGNMPCKDDFQGIIRSQDVRATEKDKVKIYNSFRLGDIVRAEVISLGDARSYYLSTAKNELGVIYAQSVAGAVMIPISWQEMQCTKTKTMEPRKCAKP 189          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12384.4878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF37_ECTSI5.720e-8291.97S1 motif domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YI70_9STRA1.270e-5566.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H6WBA8_VAULI1.810e-4557.60S1 motif domain-containing protein n=1 Tax=Vaucher... [more]
A0A2R6WRL2_MARPO1.800e-4353.03S1 motif domain-containing protein n=1 Tax=Marchan... [more]
D8S0J7_SELML4.040e-4353.03Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
A0A2R6WRL8_MARPO6.810e-4353.03S1 motif domain-containing protein n=1 Tax=Marchan... [more]
A0A176WMU3_MARPO3.510e-4253.79S1 motif domain-containing protein n=1 Tax=Marchan... [more]
A0A2P5BB28_PARAD1.440e-4155.47Exosome complex component CSL n=2 Tax=Cannabaceae ... [more]
A0A8H7EMR4_9FUNG1.480e-4156.49S1 motif domain-containing protein n=1 Tax=Apophys... [more]
A0A397V822_9GLOM1.820e-4155.73S1 motif domain-containing protein n=2 Tax=Gigaspo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019495Exosome complex component CSL4, C-terminalPFAMPF10447EXOSC1coord: 46..85
e-value: 7.1E-9
score: 36.2
coord: 16..45
e-value: 3.1E-4
score: 21.3
NoneNo IPR availableGENE3D2.40.50.140coord: 8..138
e-value: 7.7E-51
score: 173.3
IPR039771Exosome complex component Csl4PANTHERPTHR126863'-5' EXORIBONUCLEASE CSL4-RELATEDcoord: 10..138
IPR003029S1 domainPROSITEPS50126S1coord: 18..96
score: 9.357
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 14..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12384contigM-pyrifera_M_contig12384:4328..5590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12384.4878.1mRNA_M-pyrifera_M_contig12384.4878.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12384 4328..5590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12384.4878.1 ID=prot_M-pyrifera_M_contig12384.4878.1|Name=mRNA_M-pyrifera_M_contig12384.4878.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
QVSQPQRARAADQVIQVGDIIMGRVTRIDTRQASVEIICVGETVLRESHR
GIIRKEDIRATEVDKAEVSTSLCPGDIIRARVISLGDSTQYFLSTAENEL
GVRWAKSAAGAIMIPISWQEMQCPTTNEKEPRKCAKPV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019495EXOSC1_C
IPR039771Csl4
IPR003029S1_domain
IPR012340NA-bd_OB-fold