prot_M-pyrifera_M_contig123540.4812.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123540.4812.1
Unique Nameprot_M-pyrifera_M_contig123540.4812.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length168
Homology
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A7Y1UZ06_9ACTN (Copper resistance protein CopC/CopD (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1UZ06_9ACTN)

HSP 1 Score: 154 bits (388), Expect = 8.890e-42
Identity = 85/188 (45.21%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVALR--------------WSS---LQDAGPG---DPMVRDGDQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            +RG   D+R V++WVRR+G+L ++GA++E+ AQ+V+   G  S   + SA+G VV SS GIA GLR  GGV LA G+RL TI A  + DPVVA+R              W S    + A P    +P +  GD+AW  G +S++   GA+A+L + LFDGHTV+KG+R  T ++D+VHVAG A W GG
Sbjct:  195 LRGAPSDIRFVLYWVRRSGVLLLIGALIELFAQVVVAGGGPVSALWNFSALGSVVFSSLGIAIGLRAVGGVALATGSRLTTICATQVADPVVAVRELVGVGAGSSASAGWPSNFVAEGAAPNQNTEPYIHAGDRAWTAGTDSAVGFAGALAVLASFLFDGHTVSKGHRLFTSLVDVVHVAGAAVWVGG 382          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A7Y2ICV2_9ACTN (Copper resistance protein CopC/CopD n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2ICV2_9ACTN)

HSP 1 Score: 149 bits (377), Expect = 1.010e-39
Identity = 84/188 (44.68%), Postives = 114/188 (60.64%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVALRWSSLQDAGP--------------------GDPMVRDGDQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            +RG + D+R V++WVRR G L ++GA+VE+VAQ+ +   G  S   S +A+  VV SS GIA GLR  GG  LA GARL T  A +  DP+VA++  +   AGP                    G+P +  GD+AW    +S+ A +GA  +L + +FDGHTV+KGNR +TG +DIVHVAG A WAGG
Sbjct:  188 LRGARADIRFVLYWVRRGGALLLIGAVVELVAQVAVAGGGTASALWSYTALTDVVLSSLGIAIGLRAVGGFALATGARLSTTRATEAADPIVAIKELAGVGAGPTTTTGSPFDFFAPEPEVVEVGEPYLFTGDRAWSIDTDSARAFLGAAVVLASFIFDGHTVSKGNRMVTGFVDIVHVAGAAVWAGG 375          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A7Y2IFT6_9ACTN (Copper resistance protein CopC/CopD n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IFT6_9ACTN)

HSP 1 Score: 117 bits (294), Expect = 8.050e-28
Identity = 71/181 (39.23%), Postives = 103/181 (56.91%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVALRWSSLQDAGP-------------GDPMVRDGDQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            +RG  R+VR V++WVRRAG L ++G++   +AQ     +G WS   SP+A    + SS G+A  LR+ GG ++  GA+ DT AA    DPVVA++      +GP             G+  V DGD AW +   S  A+VG   ++ + LFDGHTV++G R+L    +++HV   A WAGG
Sbjct:  217 LRGNTREVRAVLYWVRRAGALLILGSVGAAMAQAATLQSG-WSGLWSPAAWANTMWSSLGLAIALRLVGGALVMTGAKFDTRAATTAGDPVVAVKQLVSVGSGPRISGPSHSMEPPGGELYVHDGDHAW-HPSASPAALVGIALIVTSFLFDGHTVSEGPRWLHAATNLIHVVTAATWAGG 395          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A7Y2ICX0_9ACTN (Copper resistance protein CopC n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2ICX0_9ACTN)

HSP 1 Score: 117 bits (294), Expect = 9.040e-28
Identity = 69/187 (36.90%), Postives = 100/187 (53.48%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVALR-------------------WSSLQDAGPGDPMVRDGDQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            +R  + D+R+V+FWVR AGLL +VG    V+ Q+V+E+ G WS   SPS++  V+ S+FG A  LR+                      PV+A+R                   WS   D    +P++  GD  W     ++  ++G+  L+ A+LFDGHTVT+GNRFLTG++D+VHV G   WAGG
Sbjct:  231 LRSSKGDIRYVLFWVRWAGLLVIVGTTAGVLGQLVVENDGNWSGAVSPSSLWSVLWSAFGAAVVLRLAXXXXXXXXXXXXXXXXXXXXXPVIAIRELASVGSGTRTGSPDTSNFWSESPDPIATEPLLHRGDHMWL---PTTAGLIGSALLVVAYLFDGHTVTEGNRFLTGLVDLVHVGGAGVWAGG 414          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A7Y1UU41_9ACTN (Copper resistance protein CopC/CopD n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1UU41_9ACTN)

HSP 1 Score: 114 bits (284), Expect = 1.730e-26
Identity = 69/183 (37.70%), Postives = 100/183 (54.64%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVALRWSSLQDAGP---------------GDPMVRDGDQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            +RG +RDVR V+FWVRRA ++   GA++E + +I  E  G W      S I   + + FG+A  LR  G  ++ + A LD + A    DPVV L+ +    AGP               G P +R GD+AWR   + +   +G +A+L +  FDGHTVT+G R +T ++ +VHV  GA W GG
Sbjct:  194 LRGHERDVRSVLFWVRRASVVLGAGAVLEALHRIA-EINGTWWTVWPLSGIADALWAPFGVAVALRFLGAALM-MRAHLDVVHATMAPDPVVVLQTAVAVGAGPRPSQAAAIGSPEAEAGAPYLRSGDRAWRVDGQLAPVALGVVAVLLSFAFDGHTVTEGTRLVTAIVAVVHVGAGAVWGGG 374          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A349B617_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B617_9ACTN)

HSP 1 Score: 107 bits (266), Expect = 5.460e-24
Identity = 65/174 (37.36%), Postives = 98/174 (56.32%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPV------VALRWSSLQDAGPGDPMVRDGDQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            MRG +R++R ++FWVRRAG++ VVG   + + Q+V   AG +     P A   V+G S G++ G R+ GG ++A  ARL  + A    D V      V +   +++ A   D   ++ D AW      + A+VG + +L +H+ DGHTVT+G+R+LTG    VHV   A W GG
Sbjct:  198 MRGTRRELRLLLFWVRRAGVVIVVGTAGDAIGQVV-HQAGGFGAVVDPGAYWSVLGGSLGVSLGARLVGGAIIATRARLVMVHARHARDVVRSISARVPIGAGAVRVADRPDGGAQERDLAWELDRRGAFALVGFVLVLVSHVMDGHTVTEGSRWLTGTASSVHVLAAAVWVGG 370          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A7Y2NBU9_9ACTN (Copper resistance protein CopC/CopD n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2NBU9_9ACTN)

HSP 1 Score: 105 bits (261), Expect = 2.880e-23
Identity = 70/181 (38.67%), Postives = 103/181 (56.91%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVALRWSSLQDAGPGD--------PMVRDG-----DQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            MRG + ++  V+  +R A  L VVGA  E++ Q+   + G W+     S +G V+ S+FG+A  L+I GG +++  A L  + A + +DPVV LR      AGP +        P V  G     +  WR   +S     G +A+L A LFDGHTV++G+R +TG++D+VHVA GA WAGG
Sbjct:  207 MRGTEGELAMVVTLIRIAAYLIVVGAAAELITQLAAVN-GDWATLTPISTVGEVLVSAFGVAVALKILGGTLMS-KAALTIVTASETLDPVVQLRQLVPVGAGPDEAALPLDAAPPVDGGLPNRHNFVWRSHSDSLGVPAGMVAVLAAFLFDGHTVSEGDRIVTGIVDVVHVAAGAIWAGG 385          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A7Y2IN95_9ACTN (Copper resistance protein CopC/CopD n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IN95_9ACTN)

HSP 1 Score: 98.6 bits (244), Expect = 6.200e-21
Identity = 68/188 (36.17%), Postives = 97/188 (51.60%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVD-----------PVVALRWSSLQDAGPGD---------PMVRDGDQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            +RG + ++ HV+FW RR G+L V+ AI+E VAQ+  ES  A +   + S    V  S+FG+A  +RI GG+ LA+GA      A    D            ++A    + Q     D         P V  G+  WR   +S+LA      LL ++ FDGHTVT+G+R++TG L+  HV G A W GG
Sbjct:  205 LRGTKGEIWHVLFWTRRGGVLVVLSAILEFVAQVSSESGQASTLSSTFS----VATSTFGLAIAMRIVGGIALAIGADFSLWTAPASPDLLPHRQQGAQRQLIAASSGAAQPPAEVDFFPNSLEKEPSVGRGELMWRATADSTLAFASVPILLISYAFDGHTVTEGDRWVTGALNAFHVGGAAVWVGG 388          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A7Y2NCU2_9ACTN (Copper resistance protein CopC/CopD n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2NCU2_9ACTN)

HSP 1 Score: 92.0 bits (227), Expect = 1.090e-18
Identity = 65/169 (38.46%), Postives = 87/169 (51.48%), Query Frame = 0
Query:    1 MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVALRWSSLQDAGPGDPMVRDGDQAW-RYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            +RG    V  VM+WVRR  LL  +GA VE VAQI               ++GGVV S+FG+A GLR+ GG++L + A L              L  ++   A P      + D       P+ + ++     L+GA LFDGHTVT+G+R LTG+ D VHV  GA W GG
Sbjct:  176 VRGYPSLVARVMYWVRRTALLIPLGAAVEFVAQI-----------GQVGSVGGVVFSTFGVALGLRVAGGMLLLMQAPLSGPPVPTAAPTGERLLVAAGHVALPRPAETCETDLVVPSTSPDGTASLAAVAMLVGAFLFDGHTVTEGSRVLTGLFDAVHVLAGAVWVGG 333          
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Match: A0A357ZYX0_9ACTN (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A357ZYX0_9ACTN)

HSP 1 Score: 62.8 bits (151), Expect = 2.000e-8
Identity = 54/178 (30.34%), Postives = 86/178 (48.31%), Query Frame = 0
Query:    2 RGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSXXXSPSAIGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVA-LRWSSLQDAGPGDPMVRDGDQAWRYGPESSLAVV----GAMALLGAHL------FDGHTVTKGNRFLTGMLDIVHVAGGADWAGG 168
            RG + + R ++F++RRA +L V+G++VE  AQ+ + +         P+  G V  + F + T  R+ G V++     +D +   +  +  V  L W +  D  P   ++ D     R  P ++L  V    G +ALLGA L      F GHT +   R L G+ D VH+   A WA G
Sbjct:  217 RGTRSESRRIVFFIRRAAVLIVLGSVVEWFAQLALWNGDGIGDLVRPAVWGEVGSTGFALGTLCRVVGAVLVLRFVAIDVVPEDEREEASVTDLEWITEPD--PSGSVMLD-----RQPPSTTLTRVRVESGPLALLGAALLILSESFIGHTASIEPRALMGVSDAVHLTSAAIWAAG 387          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123540.4812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A7Y1UZ06_9ACTN8.890e-4245.21Copper resistance protein CopC/CopD (Fragment) n=1... [more]
A0A7Y2ICV2_9ACTN1.010e-3944.68Copper resistance protein CopC/CopD n=1 Tax=Acidim... [more]
A0A7Y2IFT6_9ACTN8.050e-2839.23Copper resistance protein CopC/CopD n=1 Tax=Acidim... [more]
A0A7Y2ICX0_9ACTN9.040e-2836.90Copper resistance protein CopC n=1 Tax=Acidimicrob... [more]
A0A7Y1UU41_9ACTN1.730e-2637.70Copper resistance protein CopC/CopD n=1 Tax=Acidim... [more]
A0A349B617_9ACTN5.460e-2437.36Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A7Y2NBU9_9ACTN2.880e-2338.67Copper resistance protein CopC/CopD n=1 Tax=Acidim... [more]
A0A7Y2IN95_9ACTN6.200e-2136.17Copper resistance protein CopC/CopD n=1 Tax=Acidim... [more]
A0A7Y2NCU2_9ACTN1.090e-1838.46Copper resistance protein CopC/CopD n=1 Tax=Acidim... [more]
A0A357ZYX0_9ACTN2.000e-830.34Uncharacterized protein n=4 Tax=root TaxID=1 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123540contigM-pyrifera_M_contig123540:19..522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123540.4812.1mRNA_M-pyrifera_M_contig123540.4812.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123540 1..522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123540.4812.1 ID=prot_M-pyrifera_M_contig123540.4812.1|Name=mRNA_M-pyrifera_M_contig123540.4812.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
MRGRQRDVRHVMFWVRRAGLLAVVGAIVEVVAQIVIESAGAWSGIWSPSA
IGGVVGSSFGIATGLRIFGGVMLAVGARLDTIAAVDIVDPVVALRWSSLQ
DAGPGDPMVRDGDQAWRYGPESSLAVVGAMALLGAHLFDGHTVTKGNRFL
TGMLDIVHVAGGADWAGG
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