mRNA_M-pyrifera_M_contig123396.4788.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig123396.4788.1
Unique NamemRNA_M-pyrifera_M_contig123396.4788.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A813B7B0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B7B0_9DINO)

HSP 1 Score: 279 bits (714), Expect = 4.150e-93
Identity = 139/159 (87.42%), Postives = 148/159 (93.08%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            RPLTLSEKIVYGHLD    + PVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVA P+TIHCDHLIAA+KGS  D+A A + N+EVYDFLS+AGAKFG+GFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAG
Sbjct:   56 RPLTLSEKIVYGHLDDA-EQVPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAVPSTIHCDHLIAAEKGSSADLAAASEANKEVYDFLSTAGAKFGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAG 213
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A662Y503_9STRA (Aconitase domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y503_9STRA)

HSP 1 Score: 273 bits (699), Expect = 5.590e-88
Identity = 137/159 (86.16%), Postives = 146/159 (91.82%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            +PLTL+EKI+YGHLD   ++  VRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPK A PTTIHCDHLI A+KGS+ D+  A  +NREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG
Sbjct:   43 KPLTLAEKIIYGHLDDANTKA-VRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSNIDLNNANIVNREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 200
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A7S0P924_CAFRO (Aconitate hydratase, mitochondrial n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P924_CAFRO)

HSP 1 Score: 281 bits (718), Expect = 1.210e-87
Identity = 139/159 (87.42%), Postives = 150/159 (94.34%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            RPLTLSEKIVYGHL+   S  PVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAP+TIHCDHLIAA+ G+D DM  A+D+NREVYDFL++AGAKFG+GFW+PGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAG
Sbjct:   65 RPLTLSEKIVYGHLEDPASN-PVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPSTIHCDHLIAAENGADADMKAAKDLNREVYDFLATAGAKFGIGFWRPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAG 222
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A2D4BXR5_PYTIN (Aconitate hydratase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXR5_PYTIN)

HSP 1 Score: 277 bits (708), Expect = 3.390e-86
Identity = 138/159 (86.79%), Postives = 147/159 (92.45%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            RPLTL+EKI+YGHLD    + PVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPK A PTTIHCDHLI A+KGS++D+  A  +N+EVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG
Sbjct:   61 RPLTLAEKIIYGHLDDA-LQKPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSNKDLNNANTVNKEVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 218
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A6H5KUD2_9PHAE (Aconitate hydratase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUD2_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 1.810e-85
Identity = 138/159 (86.79%), Postives = 146/159 (91.82%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            RPLTLSEKI+YGH D   S  PVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPK A PTTIHCDHLIAA+ G+D DMA A+  N+EVYDFL+SAGAK+G+GFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG
Sbjct:   59 RPLTLSEKIIYGHFDEP-STLPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADSDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: M4B1W8_HYAAE (Aconitate hydratase, mitochondrial n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4B1W8_HYAAE)

HSP 1 Score: 274 bits (700), Expect = 3.760e-85
Identity = 136/159 (85.53%), Postives = 147/159 (92.45%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            +PLTL+EKI+YGHLD    +   RGETYLKLRPDRVAMQDATAQMAVLQFISSGLPK A PTTIHCDHLI A+KGSD+D++ A+ IN+EVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAG
Sbjct:   45 KPLTLAEKIIYGHLDDATVKA-TRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSDKDLSNAKIINKEVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAG 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A397EJ04_9STRA (Aconitate hydratase, mitochondrial (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EJ04_9STRA)

HSP 1 Score: 273 bits (697), Expect = 4.860e-85
Identity = 135/159 (84.91%), Postives = 143/159 (89.94%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            RPLTL+EKI+YGHLD      P RGETYLKLRPDRVAMQDATAQMAVLQFISSGLPK A PTTIHCDHLI A+KGS  D+  A+D+N+EVYDFL SAGAKFGMGFW+PGSGIIHQIVLENYAFPGGLMIGTDSHT NAGGLGMCAIGVGGADAVDVMAG
Sbjct:  208 RPLTLAEKIIYGHLDDPHFGTPKRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSTIDLTTAKDVNKEVYDFLESAGAKFGMGFWRPGSGIIHQIVLENYAFPGGLMIGTDSHTVNAGGLGMCAIGVGGADAVDVMAG 366
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A7S2V7X3_9STRA (Aconitate hydratase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7X3_9STRA)

HSP 1 Score: 273 bits (699), Expect = 7.520e-85
Identity = 136/159 (85.53%), Postives = 149/159 (93.71%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            RPLTLSEKIVYGHLD+  S+ PVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPK A P+TIHCDHLIAA+KGS +D+  A+  N+EVYDFL+SAGAK+G+GFW+PGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAG
Sbjct:   65 RPLTLSEKIVYGHLDNP-SQVPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAEKGSSDDLHAAKVTNKEVYDFLASAGAKYGIGFWQPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAG 222
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A484DRT4_BRELC (Aconitate hydratase, mitochondrial n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRT4_BRELC)

HSP 1 Score: 274 bits (700), Expect = 1.020e-84
Identity = 135/159 (84.91%), Postives = 146/159 (91.82%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            +PLTL+EKI+YGHLD   ++   RGETYLKLRPDRVAMQDATAQMAVLQFISSGLPK A PTTIHCDHLI A+KGSD D+  A+ +N+EVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCA+GVGGADAVDVMAG
Sbjct:  100 KPLTLAEKIIYGHLDDASTKSK-RGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSDTDLGNAKIVNKEVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAVGVGGADAVDVMAG 257
[Close]
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Match: A0A8K1CDT1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDT1_PYTOL)

HSP 1 Score: 273 bits (698), Expect = 1.040e-84
Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 1 
Query:    1 RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 477
            RPLTL+EKI+YGHLD    E  VRG+TYLKLRPDRVAMQDATAQMAVLQFISSGLPK A PTTIHCDHLI A+KGS  D+  A  +N+EVY+FLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG
Sbjct:   63 RPLTLAEKIIYGHLDDANQEA-VRGQTYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPTTIHCDHLITAEKGSITDLNTANTVNKEVYEFLSSAGAKFGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGGADAVDVMAG 220
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123396.4788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A813B7B0_9DINO4.150e-9387.42Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A662Y503_9STRA5.590e-8886.16Aconitase domain-containing protein (Fragment) n=2... [more]
A0A7S0P924_CAFRO1.210e-8787.42Aconitate hydratase, mitochondrial n=3 Tax=Cafeter... [more]
A0A2D4BXR5_PYTIN3.390e-8686.79Aconitate hydratase, mitochondrial n=1 Tax=Pythium... [more]
A0A6H5KUD2_9PHAE1.810e-8586.79Aconitate hydratase, mitochondrial n=2 Tax=Ectocar... [more]
M4B1W8_HYAAE3.760e-8585.53Aconitate hydratase, mitochondrial n=22 Tax=Perono... [more]
A0A397EJ04_9STRA4.860e-8584.91Aconitate hydratase, mitochondrial (Fragment) n=1 ... [more]
A0A7S2V7X3_9STRA7.520e-8585.53Aconitate hydratase, mitochondrial n=1 Tax=Fibroca... [more]
A0A484DRT4_BRELC1.020e-8484.91Aconitate hydratase, mitochondrial n=1 Tax=Bremia ... [more]
A0A8K1CDT1_PYTOL1.040e-8485.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123396contigM-pyrifera_M_contig123396:39..515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score276.6
Seed ortholog evalue7.5e-72
Seed eggNOG ortholog42099.EPrPV00000017755
Preferred nameACO2
KEGG rclassRC00497,RC00498,RC00618
KEGG koko:K01681
KEGG ReactionR01324,R01325,R01900
KEGG Pathwayko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230
KEGG ModuleM00009,M00010,M00012,M00173,M00740
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0001889,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006102,GO:0006520,GO:0006536,GO:0006807,GO:0006950,GO:0006996,GO:0007005,GO:0007275,GO:0008150,GO:0008152,GO:0008198,GO:0009060,GO:0009064,GO:0009295,GO:0009605,GO:0009607,GO:0009987,GO:0015980,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0031012,GO:0031347,GO:0031349,GO:0031974,GO:0032501,GO:0032502,GO:0035821,GO:0035900,GO:0042645,GO:0043167,GO:0043169,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043648,GO:0044003,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044416,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0048037,GO:0048513,GO:0048518,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052251,GO:0052255,GO:0052509,GO:0052510,GO:0055114,GO:0061008,GO:0062039,GO:0062040,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0072350,GO:0075136,GO:0080134,GO:0097159,GO:1901363,GO:1901564,GO:1901605
EggNOG free text desc.Aconitate hydratase, mitochondrial
EggNOG OGs1MDC0@121069,COG1048@1,KOG0453@2759
EC4.2.1.3
COG Functional cat.CE
BiGG ReactioniMM904.YLR304C,iND750.YLR304C
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons1
Model size477
Cds size477
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815752.4017525-CDS-M-pyrifera_M_contig123396:38..5151622815752.4017525-CDS-M-pyrifera_M_contig123396:38..515Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123396 39..515 -
1692277552.81074-CDS-M-pyrifera_M_contig123396:38..5151692277552.81074-CDS-M-pyrifera_M_contig123396:38..515Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123396 39..515 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123396.4788.1prot_M-pyrifera_M_contig123396.4788.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig123396 39..515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig123396.4788.1

>prot_M-pyrifera_M_contig123396.4788.1 ID=prot_M-pyrifera_M_contig123396.4788.1|Name=mRNA_M-pyrifera_M_contig123396.4788.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp
RPLTLSEKIVYGHLDSVGSEGPVRGETYLKLRPDRVAMQDATAQMAVLQF
ISSGLPKVAAPTTIHCDHLIAAQKGSDEDMAVAEDINREVYDFLSSAGAK
FGMGFWKPGSGIIHQIVLENYAFPGGLMIGTDSHTPNAGGLGMCAIGVGG
ADAVDVMAG
back to top

mRNA from alignment at M-pyrifera_M_contig123396:39..515-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig123396.4788.1 ID=mRNA_M-pyrifera_M_contig123396.4788.1|Name=mRNA_M-pyrifera_M_contig123396.4788.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=477bp|location=Sequence derived from alignment at M-pyrifera_M_contig123396:39..515- (Macrocystis pyrifera P11B4 male)
CGTCCTTTGACTCTTTCCGAGAAGATCGTGTACGGTCACTTGGACAGCGT
GGGTTCTGAGGGCCCGGTGCGTGGGGAGACGTACCTGAAGCTTCGCCCGG
ATCGCGTGGCGATGCAGGATGCGACTGCGCAGATGGCAGTGTTGCAGTTC
ATTTCGAGCGGTTTGCCCAAGGTGGCCGCCCCCACGACGATCCACTGTGA
CCACTTGATCGCAGCGCAGAAAGGGTCGGACGAGGACATGGCTGTGGCCG
AGGACATCAACCGCGAAGTGTACGATTTCTTGAGCTCTGCGGGGGCCAAA
TTCGGAATGGGCTTTTGGAAGCCAGGGAGTGGTATCATCCACCAGATCGT
GCTTGAAAACTATGCTTTTCCAGGTGGTCTCATGATTGGCACAGATTCCC
ACACACCCAATGCGGGTGGGTTGGGCATGTGTGCCATTGGCGTGGGTGGC
GCTGATGCTGTGGACGTCATGGCTGGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig123396:39..515-

>mRNA_M-pyrifera_M_contig123396.4788.1 ID=mRNA_M-pyrifera_M_contig123396.4788.1|Name=mRNA_M-pyrifera_M_contig123396.4788.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=954bp|location=Sequence derived from alignment at M-pyrifera_M_contig123396:39..515- (Macrocystis pyrifera P11B4 male)
CGTCCTTTGACTCTTTCCGAGAAGATCGTGTACGGTCACTTGGACAGCGT
GGGTTCTGAGGGCCCGGTGCGTGGGGAGACGTACCTGAAGCTTCGCCCGG
ATCGCGTGGCGATGCAGGATGCGACTGCGCAGATGGCAGTGTTGCAGTTC
ATTTCGAGCGGTTTGCCCAAGGTGGCCGCCCCCACGACGATCCACTGTGA
CCACTTGATCGCAGCGCAGAAAGGGTCGGACGAGGACATGGCTGTGGCCG
AGGACATCAACCGCGAAGTGTACGATTTCTTGAGCTCTGCGGGGGCCAAA
TTCGGAATGGGCTTTTGGAAGCCAGGGAGTGGTATCATCCACCAGATCGT
GCTTGAAAACTATGCTTTTCCAGGTGGTCTCATGATTGGCACAGATTCCC
ACACACCCAATGCGGGTGGGTTGGGCATGTGTGCCATTGGCGTGGGTGGC
GCTGATGCTGTGGACGTCATGGCTGGCCGTCCTTTGACTCTTTCCGAGAA
GATCGTGTACGGTCACTTGGACAGCGTGGGTTCTGAGGGCCCGGTGCGTG
GGGAGACGTACCTGAAGCTTCGCCCGGATCGCGTGGCGATGCAGGATGCG
ACTGCGCAGATGGCAGTGTTGCAGTTCATTTCGAGCGGTTTGCCCAAGGT
GGCCGCCCCCACGACGATCCACTGTGACCACTTGATCGCAGCGCAGAAAG
GGTCGGACGAGGACATGGCTGTGGCCGAGGACATCAACCGCGAAGTGTAC
GATTTCTTGAGCTCTGCGGGGGCCAAATTCGGAATGGGCTTTTGGAAGCC
AGGGAGTGGTATCATCCACCAGATCGTGCTTGAAAACTATGCTTTTCCAG
GTGGTCTCATGATTGGCACAGATTCCCACACACCCAATGCGGGTGGGTTG
GGCATGTGTGCCATTGGCGTGGGTGGCGCTGATGCTGTGGACGTCATGGC
TGGC
back to top