mRNA_M-pyrifera_M_contig12314.4749.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: D8LSB0_ECTSI (DNA-directed primase/polymerase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB0_ECTSI) HSP 1 Score: 612 bits (1579), Expect = 7.220e-200 Identity = 468/1005 (46.57%), Postives = 532/1005 (52.94%), Query Frame = 1
Query: 1 QRPPVASPEKCRRAGAGRRRPNVRDGSTKR---YVVLSLDGPGGEDN-----------ADGRAGGADKRSR--------------GAGEEXXXXR----RRSRKRPLEG----SGERLTGWTEGSKAFPSSPPPQRR----AGG-------KVECSWLTLRKALHERYRDLLENGAAEQAASEADRGSGCKGSGWG--------GEVLLPGLRVFRRQEQAFMYADALETRLAPDDAARYKVLSFETSSTGSRKFLVCDVRRFEEHYPYTAAPNQ------HIFPPVQARYP----CPRPPPQPTAPPPRTEQG----SDSAGAQCLPAGPGVGSEGGAIGDDGQRLPMGTTRPAP-----------------------------------------------RPSPLWHVYEIIREGSPCRMYFDLEFTRAYNPGLDGEGLVRAWINVVAGKLHQDFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHVGRFVNSLAADLESWR-PSSSLLPSSPNTNDGERSVDATAPLHPAIPTPTSTPPKGDSAFRNDDVSWSVTTPMATPDGAGAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXX---------------ALESLWVNDGSGRTVLFADVSVYTRNRCFRLLGSRKYGKPAALKMAISNQRPLDHMEWKGA-----------------RQSRDPRGVVRTVLHDSFVVPASLRSR-GEVFLTVDG-EGQRRYSRYGRAH------SPPQQQQP----TRVRVFSDKDISDGLRVMTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVSSSGLGSSPFPAVDSFIRTLICHGGPRGDLRQWSYTAGEISRDVVVGDEMAKE--------AGAAPLKSG--------PAAVTRKLTHQVANNRWCWNIGRAHKSNHVYLVTDLSSGEVCQRCHDQECRRLGYRSRPVRLPPAVAPSVEDLEAYELELGVAAAIRESPTDWAAV 2484
+RP VASP RRRP VRDG+ R VVL L D A G + +R+R G GE+ R R P+E S E L+G K + PPPQ R A G K E SWL LR+ALHERYRD +E+GAAEQ A+EA GEV+ PG+RVFRRQ+ AF Y DAL RLA +DAARY+VLSFETS+TGSRKF+VCD+RRFEE YPYTA P+ H+ P R P P P + PP DS+ + PG G G D R P TT P+P RPSPL H+YEIIREG PCRMYFDLEF R NPGLDGE LV AWINVVAGKLHQ+F VSVG SN LDLDSSTPKKFSRHLI HLPG QLF DNSHVGRFVNSLAA+LESWR P S P++P G + TA A+ P G D + P A V + A +P XXXXXXXXXXXXXXXXXXXXXXXX ALE LWV DG GR VLFADVSVYTRNRCFRLLGS K+GK A L++A +N+R LDHM W+G Q + R V RT+LHDS VVP + RS E+FLTV G GQ RYSR+G S QQ+Q T + +++ G G+ W VSS G G SPFPAVDSF+RTL+ GG RG+LRQWSYTAG++ V D AG L S PA V RKLTHQVANNRWCWNIGRAHKSNHV+LVTDLS GEV Q CHDQECRR GYRS PVRLP VAP +DLEA+ELELG+AAA+RESP DWAAV
Sbjct: 297 RRPLVASPPNRXXXXXXRRRPKVRDGARNRNGRVVVLRLHDDDDNDREAPTSGAAISPAASSRGSSVRRARAAVHDIGVGVGVCAGVGEDQQQPEVGEHPRKRLLPVESLAHPSNESLSG-----KRNKALPPPQPRSLHTAAGVFRGSRSKGESSWLALRQALHERYRDSVEHGAAEQTAAEAXXXXXXXXXXXXXXXXXXXXGEVMSPGIRVFRRQDHAFTYVDALAARLAAEDAARYRVLSFETSATGSRKFVVCDIRRFEERYPYTALPDPSLLRHLHLPDPTHHRQPGSPSSPLPXXXXQSTPPHVPSSPAIAEDSSNRGECDSNPGDGRNTG----DSVRSPATTTTPSPMSLEPLEPPQPAAFPAPRPDGSGVSSVGPVCEKPSHPPCPCPSSPPPRPSPLRHMYEIIREGRPCRMYFDLEFARGPNPGLDGEELVCAWINVVAGKLHQEFGVSVGTSNVLDLDSSTPKKFSRHLIFHLPGDQLFLDNSHVGRFVNSLAAELESWRAPQSPSTPATP-PGIGRDDIVPTATAAAAVAVPHCVIRSGGGNAGGGDHLGGTPSSDDFPTSA---VPVPTVATAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALERLWVKDGDGRRVLFADVSVYTRNRCFRLLGSSKFGKAACLRVAATNKRTLDHMVWRGRGGGTFARTSSSSLLSPREQKQQLRDVARTLLHDSLVVPVTPRSSPAELFLTVGGGTGQHRYSRFGSCRKQTGDCSSSQQRQQHGWSTNGTISAERGEHRGSSQDHGSGSSDGDG---------------------WRVSSQGFGPSPFPAVDSFLRTLVGQGGTRGELRQWSYTAGQVPPRTVEHDHQEXXXXXXXXXXAGGTGLVSPGSQSAPQPPATVVRKLTHQVANNRWCWNIGRAHKSNHVFLVTDLSRGEVRQHCHDQECRRSGYRSNPVRLPIGVAPLEDDLEAFELELGLAAAMRESPADWAAV 1267
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: A0A6H5L6M6_9PHAE (DNA-directed primase/polymerase protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M6_9PHAE) HSP 1 Score: 356 bits (913), Expect = 3.530e-110 Identity = 240/512 (46.88%), Postives = 278/512 (54.30%), Query Frame = 1
Query: 1120 QLFRDNSHVGRFVNSLAADLESWR----PSSSLLPSSPNTNDGERSVDATAPLHPAIPTPTSTPPKGD---SAFRNDDVSWSVTTPMATPDGA---GAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXXALESLWVNDGSGRTVLFADVSVYTRNRCFRLLGSRKYGKPAALKMAISNQRPLDHMEWKGA---------------------RQSRDPRGVVRTVLHDSFVVPASLR-SRGEVFLTVDG-EGQRRYSRYGRAH------SPPQQQQP----TRVRVFSDKDISDGLRVMTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVSSSGLGSSPFPAVDSFIRTLICHGGPRGDLRQWSYTAGEISRDVVVGDEMAKEAGAAPLKSG--------------PAAVTRKLTHQVANNRWCWNIGRAHKSNHVYLVTDLSSGEVCQRCHDQECRRLGYRSRPVRLPPAVAPSVEDLEAYELELGVAAAIRESPTDWAAV 2484
QLF DNSHVGRFVNSLAA+LESWR PS+S P +D + A A H T +GD +DD + P+ T G G +T + AP XXXXXX ALE LWV DG+GR VLFADVSVYTRNRCFRLLGS K+GK A L++A NQR L HM W+G Q + R V RT+LHDS VVPA+ R S E FLTV G GQ RYSR+G + S QQ+Q T + +++D G G W VS+ G G SPFPAVDSF+RTL+C GG RG+LRQWSYTAG++ V D A + PA V RKLTHQVANNRWCWNIGRAHKSNHV+LVTDLS GEV Q CHDQECRR GYRS PVRLP VAP +DLEA+ELE+G+AAA+RESP DWAAV
Sbjct: 25 QLFLDNSHVGRFVNSLAAELESWRAPQSPSTSATPPGIGRDDIVPTSAAVAVPHCGSRTGGGNTGRGDHLGGTSASDDFVPTSVVPIPTVAKTRREGNGDASTGLTPTIATAPKMAKEYCSNDDKTKGGXXXXXXAGALERLWVMDGNGRRVLFADVSVYTRNRCFRLLGSSKFGKAACLRVAAKNQRTLAHMVWRGRVGGAFARTSSXXXXXXXLSPREQKKQLRDVARTLLHDSLVVPATPRTSPAERFLTVGGGAGQHRYSRFGSSRNQAGDCSSLQQRQQHGWSTASTMSAERDGHRGSSQHHGCGSSDGDG---------------------WRVSTQGFGLSPFPAVDSFLRTLVCQGGTRGELRQWSYTAGQVPSRTVEHDGQEGNANGSGXXXXXXXXXXXXXXXPRTPATVVRKLTHQVANNRWCWNIGRAHKSNHVFLVTDLSRGEVRQHCHDQECRRSGYRSNPVRLPMGVAPLEDDLEAFELEIGLAAAMRESPADWAAV 515
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: A0A6H5L604_9PHAE (DNA-directed primase/polymerase protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L604_9PHAE) HSP 1 Score: 286 bits (732), Expect = 1.860e-79 Identity = 216/484 (44.63%), Postives = 250/484 (51.65%), Query Frame = 1
Query: 1 QRPPVASPEKCRRAGAGRRRPNVRDGSTKR---YVVLSLDGPGGEDNADGRAGGADKRSRGAGEEXXXXRRRS-----RKRPLEGSGERLTGWTEGSKAFPSS-----------PPPQRR-----AGG------KVECSWLTLRKALHERYRDLLENGAAEQAASEA-DRGSGCKGS-------GWGGEVLLPGLRVFRRQEQAFMYADALETRLAPDDAARYKVLSFETSSTGSRKFLVCDVRRFEEHYPYTAAPNQHIFPPVQARYPCPR-----------------PPPQPTAPPPRTEQGSDSAGAQCLPAGPGVGSEGGAIGDDGQRLPMGTT-------------RPA----------------------------------PRPSPLWHVYEIIREGSPCRMYFDLEFTRAYNPGLDGEGLVRAWINVVAGKLHQDFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHV 1146
+RP VASP RR AGRR P VR G+ R VVL L D+ D A + + A RR+ +++ +G R S A PS+ PPPQ R AG K E SWL LR+ALHERYRD E+GAAEQAA+EA + G G + G GGEV+ PG+RVFRRQ+ AF Y DAL RLA +DAARY+VLSFETS+TGSRKF+VCD+RRFEE YPYTA P+ + R P P PP P+ P DS+ + PG G G D R P TT +PA PRPSPL H+YEIIREG PCRMYFDLEF R NPGLDGE LVRAWINVVAGKLH++F VSVG SN LDLDSSTPKKFSRHLI HLPG Q R +
Sbjct: 485 RRPLVASPPNRRRTAAGRRMPKVRHGARNRNGGVVVLCLH----NDDNDREAFTSGAAIKPAASSLGSSVRRAGVREDQQKAEDGEHLRKRLLPVASLAHPSNESLSRKRNKAPPPPQPRSLHTAAGAFRGSRSKGESSWLALRRALHERYRDSEEHGAAEQAAAEAAEHGRGGRAGSSKVGRGGCGGEVMSPGIRVFRRQDHAFTYVDALAARLAAEDAARYRVLSFETSATGSRKFVVCDIRRFEERYPYTALPDPSLL--RHLRLPDPTHXXXXXXXXXXXXXXXXPPHVPSGP----AIAEDSSNRGECDSHPGDGRNTG----DNVRSPATTTTASPVSLEPLELPQPAVFPTPSPDGSGVSSLDPVCEKSSHPPCPCPXXXXPRPSPLRHMYEIIREGCPCRMYFDLEFARGPNPGLDGEELVRAWINVVAGKLHREFGVSVGASNVLDLDSSTPKKFSRHLIFHLPGDQDVRAKESI 954
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: K3WHZ0_GLOUD (DNA-directed primase/polymerase protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHZ0_GLOUD) HSP 1 Score: 167 bits (422), Expect = 2.110e-39 Identity = 139/508 (27.36%), Postives = 199/508 (39.17%), Query Frame = 1
Query: 880 HVYEIIREGSPCRMYFDLEFTRAYNPGLDGEGLVRAWINVVAGKLHQDFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHVGRFV----NSLAADLESWRPSSSLLPSSPNTNDGERSVDATAPLHPAIPTPTSTPPKGDSAFRNDDVSWSVTTPMATPDGAGAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXXALESLWVNDGSGRTVLFADVSVYTRNRCFRLLGSRKYGKPAALKMAISNQRPLDHMEWKGARQSRDPRGVVRTVLHDSFVVPASLRSRGEVFLTVDGEGQRRYSRYGRAHSPPQQQQPTRVRVFSDKDISDGLRVMTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVSSSGLGSSPFPAVDSFIRTLICHGGPRGDLRQWSYTAGEISRDVVVGDEMAKEAGA-APLKSGPAAVTRKLTHQVANNRWCWNIGRAHKSNHVYLVTDLSSGEVCQRCHDQECRRLGYRSRPVRLPP 2388
HVYEIIREG PCR+YFDLEF +A NP ++G+ LV +++V +L++ + + + LDSST KFSRHLI HLP G+LF DN H G F+ ++L A+ + PS + G++ P+ A P ES D + LF DV VYTRNR FR+LGS KY + A LK P+ + + A + + R + S V P S E + Q R + R + ++ S R A+ S FP +D+FI T+ GG +G++R ++ ++ D + L+ + +Q+A NRWCWN+ RAHKSN+V V DL V Q+CHDQ+C+ + YRS P LPP
Sbjct: 331 HVYEIIREGVPCRLYFDLEFKKACNPLVNGDELVERLVSLVQLQLYRKYGIHATREAVVQLDSSTNAKFSRHLIFHLPQGELFADNIHAGNFIREFIHALVANPRDQVDEVNDHPSPFLVSTGQQ-----RPIDDAYP---------------------------------------------------------------------------ESNNTGDHNRSKQLFIDVGVYTRNRMFRVLGSSKYRRDAILK-------PMPTAQTQAAVTTAGDDALDRNLFLQSLVCPFPTLSSMETHFEAKKQRQPRLLYCDAEY--------VSTRSYGERQSSVYQRNTHSASVECRH--------------------------------SMFPKLDAFILTISNTGGVQGEIRAIHMLFDNVNNVILPSDNFNDDFSQNEELRQQKKKHPWMVIYQMARNRWCWNVRRAHKSNNVMFVVDLDQRVVYQKCHDQQCKAIDYRSPPQPLPP 711
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: A0A5D6XRH5_9STRA (DNA-directed primase/polymerase protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRH5_9STRA) HSP 1 Score: 153 bits (387), Expect = 4.590e-35 Identity = 141/510 (27.65%), Postives = 194/510 (38.04%), Query Frame = 1
Query: 880 HVYEIIREGSPCRMYFDLEFTRAYNPGLDGEGLVRAWINVVAGKLHQ-DFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHVGRFVNSLAADL-ESWRPSSSLLPSSPNTNDGERSVDATAPLHPAIPTPTSTPPKGDSAFRNDDVSWSVTTPMATPDGAGAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXXALESLWVNDGSGRTVLFADVSVYTRNRCFRLLGSRKYGKPAALK-MAISNQRPLDHMEWKGARQSRDPRGVVRTVLHDSFVVPASLRSRGEVFLTVDGEGQRRYSRYGRAHSPPQQQQPTRVRVFSDKDISDGLRVMTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVSSSGLGSSPFPAVDSFI-RTLICHGGPRGDLRQWSYTAGEISRDVVVGDEMAKEAGAAPLKSGPAAVTRK---LTHQVANNRWCWNIGRAHKSNHVYLVTDLSSGEVCQRCHDQECRRLGYRSRPVRLPP 2388
HVYEIIRE PCR+YFDLEF ++ NP +DG+ LV +++V +L Q F V + LDSS KFSRHLI HLP G LF DN H G FV DL ES R + ++D + V T A +L + + + LF D VYTRNR FR+LGS K+ + A L+ + +++ + R D+ V P F T++ + S +G RVR+ + L+ +GA +S FP +D+F+ T GG G++R + DV + + E SG AA + L +Q+A NRWCWN+ RAHKSN+V V DL Q+CHDQ C + YRS P+ LPP
Sbjct: 301 HVYEIIRERVPCRLYFDLEFKKSCNPRVDGDQLVARLVSLVQLQLFQRKFHVHARREQIVQLDSSDAAKFSRHLIFHLPEGALFADNIHAGNFVRGFIHDLVESAREA-----------------------------------------EDEDSPFLVNT----------------------------------------GREQQQQSVATNTLEIGPATPQRQLFIDTGVYTRNRMFRVLGSSKFRRDAVLRPLPLASSAXXXXXXXXXXXXXXXSSVLRRGTFLDALVCP---------FPTLEAL---QASPHG-----------ARVRLLHCEQDESALQRSSGARPLWAPAGRASNRLSRARAVERR--------------ASGFPKIDAFVLATARRRGGVEGEIRAVQVLFDSV--DVALPGDPTPE-----HSSGGAAAPKTPWMLVYQMARNRWCWNVQRAHKSNNVMYVVDLEQRVCYQKCHDQVCNTVDYRSPPLPLPP 685
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: A0A5A8EFB2_CAFRO (DNA-directed primase/polymerase protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFB2_CAFRO) HSP 1 Score: 145 bits (367), Expect = 4.960e-33 Identity = 167/580 (28.79%), Postives = 213/580 (36.72%), Query Frame = 1
Query: 880 HVYEIIREGSPCRMYFDLEFTRAYNPGLDGEGLVRAWINVVAGKLHQDFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHVGRFVNSLAADLESWRPSSSLLPSSPNTNDGERSVDATAPLHPAIPTPTSTPPKGDSAFRNDDVSWSVTTPMATPDGAGAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXXALESLWVNDGSGRTVLFADVSVYTRNRCFRLLGSRKYGKPAALKMAISNQRPLD-HMEWKGARQSRDPR-----------------------------GVV---RTVLHDSFVVPASLRSRGEVF-LTVDGEGQRRYSRYGRAHSPPQQQQPTR-------------VRVFSDKDISDGLRVMTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVSSSGLGSSPFPAVDSFIRTLICH-GGPRGDLRQWSY--------------------TAGEISRDVVVGDEMAKEAGAAPLKSG-----PAAVTRKLTHQVANNRWCWNIGRAHKSNHVYLVTDLSSGEVCQRCHDQECRRLGYRSRPVRLPPAVAP 2400
H YEIIREG C +Y D+EF RA N GLDG LV + L + F + G + +DLDSST KFSRHL++ LPGGQ FRDN HVGRFV L A L + E + DA A P T P V+ S+ P + D A G S + P GRT + D+ VYTRNR RL SRKYGK A+L A +N + + W AR + R G + R+V +FV P L D G P + P R S K + GL GA + SPFP VD+++ L GGP +R + AGE R G E A AGAAP + AA+ R+L + +A+NR+C IGR H+SN+V DL +G Q C D CR G+RS V++P V P
Sbjct: 42 HFYEIIREGCACHLYLDIEFRRAANKGLDGSALVAFLTVRILTALQERFGIRAGLEDVIDLDSSTDAKFSRHLVVVLPGGQRFRDNQHVGRFVLLLVAALAN-----------------EAATDALAAALWVRPEETDAAPPATEGAPAPAVAASMAGPGESTDRAKPGRAEES------RTPL---------------------------------EGRTPI-VDLGVYTRNRAMRLYMSRKYGKKASLMPASTNAFEVSGRLAWWRARTVGESRIASSGSGXXXXSSRVALVHADGGPQEVQAGDIAWERSVWDAAFVTPWGTPPESTTAPLASDSAG-------CGGEGPQLLEVPLSSLLALGLGTESGAFRAQSGK-VGPGLHPSPGAGVLAMYNALLREDAPQDGWGRGGDRPAVAVPQTRPAAESPFPPVDAWVLQLAASFGGPPARIRSVAVLTRAVRLVSLDRNAGATSEAAAGEGDRAPRQG-ESAGAAGAAPTDTAGADRREAALVRRLIYSMADNRFCLRIGRQHRSNNVAFSVDLEAGTANQTCMDPLCR--GWRSDAVQVPVEVLP 553
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: A0A6S8THK3_9STRA (DNA-directed primase/polymerase protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8THK3_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.060e-32 Identity = 141/532 (26.50%), Postives = 202/532 (37.97%), Query Frame = 1
Query: 880 HVYEIIREGSPCRMYFDLEFTRAYNPGLDGE---GLVRAWINVVAGKLHQDFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHVGRFVNSLAADLESWRPSSSLLPSSPNT------NDGERSVDATAPLHPAIPTPTSTPPKGDSAFRNDDVSWSVTTPMATPDGAGAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXXALESLWVNDGSGRT-----VLFADVSVYTRNRCFRLLGSRKYGKP--AALKMAISNQRPLDHMEWKGARQSRDPRGVVR-----TVLHDSFVVPASLRSRGEVFLTVDGEGQRRYSRYGRAHSPPQQQQPTRVRVFSDKDISDGLRVMTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVSSSGLGSSPFPAVDSFIR-TLICHGGPRGDLRQWSYTAGEISRDVVVGDEMAKEAGAAPLKSGPAAVTRKLTHQVANNRWCWNIGRAHKSNHVYLVTDLSSGEVCQRCHDQECRRLGYRSRPVRLPPAVAPSVE 2409
H YE+IRE +PCR+YFDLE+ + NPG+ E L+ +I+ ++ ++H F +S+ + DLDSST KKFSRHLI H P G+LF D G FV + L + +L P N E S + T P VS + + A + P + XXX E N F D VYTRNR FRLLGS K+GKP AAL++A +N G+ S D + L S V PA E + VDGEG+ + ++++ + + + +TG +++ G SPFP +D F+ L G +G +R+W+ + E RD D +T+Q+ NRWC NI R HKSN+V L Q C D +CR +R +P + +E
Sbjct: 255 HYYELIREETPCRLYFDLEYNKKANPGITNETNEALINEFISELSAEIHSQFNISMKRRHVFDLDSSTDKKFSRHLICHFPNGELFADAVSCGDFVKNFVGQLAEGVATKTLEEKCPTLAKYLFINSKEESSSTLPVVEIGTGTVVEAPITKSGISHEILVSQAPNKESQSKHEISANIDVHISGDEPSEESNKELSPSKDERKXXXEDGIEKNHQ--EETQHNPSRHHAYDQNKTCFVDTGVYTRNRLFRLLGSSKFGKPPSAALRVAAANTFKFSDAALTGSSDSNDIDKLFNWCNRAASLVQSLVTPAV----NETY--VDGEGELKI---------------LKIKITDEATVGNDRVPLTGRHGRAKPRGP---------------------INTKRYGPSPFPLLDEFVNENLAKRKGVKGAMREWAILSSE--RDDFDNDAT-------------------ITYQIKGNRWCENIQRCHKSNNVMWSVSLRDMNYWQTCWDPDCRMASFRGLVQEVPYDIKKEIE 721
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: UPI001403BC5D (DNA-directed primase/polymerase protein isoform X1 n=5 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403BC5D) HSP 1 Score: 140 bits (353), Expect = 1.610e-30 Identity = 133/557 (23.88%), Postives = 206/557 (36.98%), Query Frame = 1
Query: 880 HVYEIIREGSPCRMYFDLEFTRAYNPGLDGEGLVRAWINVVAGKLHQDFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHVGRFVNSLAADL-------------ESWRPSSSLLPSSPNTND--------GERSVDATAPLHPAIPTPTSTPPKGDSAFRNDDVSWSVTTPMATPDG----------------------AGAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXXALESLWVNDGSGRTVLFADVSVYTRNRCFRLLGSRKYGKPAALKMAISNQRPLDHMEWKG---ARQSRDPRGVVRTVLHDSFVVPAS--LRSRGEVFLTVDGEGQRRYSRYGRAHSPPQQQQPTRVRVFSDKDISDGLRVMTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVSSSGLGSSPFPAVDSFIRTLICHGGPRGDLRQWSYTAGEISRDVVVGDEMAKEAGAAPLKSGPAAVTRKLTHQVANNRWCWNIGRAHKSNHVYLVTDLSSGEVCQRCHDQECRRLGYRSRPVRLPPAVAPSV 2406
H YE+I EGS C +YFD+EF+R NP LDG L I V + + ++ + L LDSS+ KFSRHL+ H+PG F+DN G FV + L E+ + P+ P+ + GE + + + T DS N + + + + AG M C+ + LE+L V D +G+ L D+ VYT+NR FRL GS K G L++A + + G AR++ G R + A +R + ++FL + ++ + + GLR+++ +G +SPFP +D++IR+ + GG +GD+R W + G T L ++ NRWC N+GRAH+SN+ DL G Q+CHDQEC+ + +RS+ LP P +
Sbjct: 339 HYYEVIPEGSTCHLYFDVEFSRESNPDLDGGSLTATLIKYVCACIQACYGLACTTGDVLSLDSSSASKFSRHLLFHIPGAA-FQDNLQAGNFVRKIFKPLAEKICNIKLQGVPEAHSVCPTESPAVPHIAESTLSQMLQGEFKIKEPLDILESHKTLWDDADSNDSWIENWKREFDLESSRCGSENDQESKSNGECTGTLHDHTNTQFTKAGEMTLDCSETWYYPQDQGTSGPEKRSLWDILDYRATWQHFLEALIVKDKTGQLTLAVDLGVYTKNRNFRLYGSSKAGVLVPLRLAPDDSYVAQRLPAWGIHRARETMPSTGTTRASERPACSSEAKKHVRLQEKIFLAS---------------------------LITNVERAPGLRLLSCLGSPMDTHRTNTFAANNAHGDAKLV---------TGYQASPFPEIDAYIRSQLNKGGVQGDIRCWKFYEG----------------------------TGLLVYEATKNRWCENVGRAHRSNNTCYFVDLHQGIFYQKCHDQECKAIHFRSQNYPLPQECLPKL 830
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: UPI001C089BB4 (DNA-directed primase/polymerase protein isoform X1 n=4 Tax=Alosa TaxID=34772 RepID=UPI001C089BB4) HSP 1 Score: 124 bits (311), Expect = 5.910e-26 Identity = 87/259 (33.59%), Postives = 113/259 (43.63%), Query Frame = 1
Query: 874 LWHVYEIIREGSPCRMYFDLEFTRAYNPGLDGEGLVRAWINVVAGKLHQDFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHVGRFVNSLAADLESWRPSSSLLPSSPNTNDGERSVDATAPLHPAIPTPTSTPPKGDSAFRNDDVSWSVTTPMATPDGAGAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXXALESLWVNDGSGRTVLFADVSVYTRNRCFRLLGSRKYGKPAALKMAISNQ 1650
L H YE+I EG+ C++YFDLEF RA+NPGL+GE +V I V KLH+ + + S+ L+LDSST KFSRHLI LP FRDNSHVGRF++++ ++ N+N E G+ TS + P A L L V + G+ LF D+ VYT+NR FRL S K GK AAL +A NQ
Sbjct: 100 LMHCYEVIPEGAVCKLYFDLEFQRAWNPGLNGETMVACLIQYVCKKLHEAYGLKCSSSDVLNLDSSTEDKFSRHLIFQLPNAT-FRDNSHVGRFIHAILTPVK-------------NSNHPE----------------------------------------------GSSTTCTSEGIDPLTAMEYIPNTDRGMLGSPQPKRQKHGEDDLSFLSVKNKEGQIQLFVDLGVYTKNRNFRLYKSSKLGKNAALVVAEDNQ 298
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Match: A0A835YVT3_9STRA (DNA-directed primase/polymerase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT3_9STRA) HSP 1 Score: 121 bits (304), Expect = 4.570e-25 Identity = 91/251 (36.25%), Postives = 116/251 (46.22%), Query Frame = 1
Query: 880 HVYEIIREGSPCRMYFDLEFTRAYNPGLDGEGLVRAWINVVAGKLHQDFRVSVGGSNFLDLDSSTPKKFSRHLILHLPGGQLFRDNSHVGRFVNSLAADLESWRPSSSLLPSSPNTNDGERSVDATAPLHPAIPTPTSTP-PKGDSAFRN-------------DDVSWSVTTPMATPDGAGAGVMATSCAVSPCKAPXXXXXXXXXXXXXXXXXXXXXXXXALESLWVNDGSGRTVLFADVSVYTRNRCFR 1590
H YE+IREG PCR+YFD+EF+R NP LDG+ LVR W++ V KL D +V + LDS+T +KFSRH+ILHL GG+LF N H G VN L + ++ ++P T P P+ T S+P +G +A + DDV T AT DG G GV +SC L V G+ V F D SVYTRNRCFR
Sbjct: 202 HWYEVIREGMPCRLYFDMEFSREANPTLDGDALVRRWLDAVQAKLLHDHGATVESDGIVQLDSTTERKFSRHVILHLEGGRLFASNVHAGHLVNQLLGEQLLAHAKATTAAAAPPQRT------CTVPSPPSAATNGSSPCNRGYTASQAEACLATLALSTQIDDVD----TQTATQDG-GMGV-GSSC-----------------------------------WLMVEGEGGKHVSFVDTSVYTRNRCFR 405 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12314.4749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12314.4749.1 >prot_M-pyrifera_M_contig12314.4749.1 ID=prot_M-pyrifera_M_contig12314.4749.1|Name=mRNA_M-pyrifera_M_contig12314.4749.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=830bp QRPPVASPEKCRRAGAGRRRPNVRDGSTKRYVVLSLDGPGGEDNADGRAGback to top mRNA from alignment at M-pyrifera_M_contig12314:1837..9100- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12314.4749.1 ID=mRNA_M-pyrifera_M_contig12314.4749.1|Name=mRNA_M-pyrifera_M_contig12314.4749.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7264bp|location=Sequence derived from alignment at M-pyrifera_M_contig12314:1837..9100- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12314:1837..9100- >mRNA_M-pyrifera_M_contig12314.4749.1 ID=mRNA_M-pyrifera_M_contig12314.4749.1|Name=mRNA_M-pyrifera_M_contig12314.4749.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4980bp|location=Sequence derived from alignment at M-pyrifera_M_contig12314:1837..9100- (Macrocystis pyrifera P11B4 male)back to top |