mRNA_M-pyrifera_M_contig12294.4711.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: D7G6X1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X1_ECTSI) HSP 1 Score: 398 bits (1023), Expect = 2.000e-129 Identity = 248/413 (60.05%), Postives = 297/413 (71.91%), Query Frame = 1
Query: 1 RMAPSRRIGVALVCAWTTTVGLAFVPNVGTGCTAFRPRQGVEPRSTAI----PRSQHRSSFAGAPIIYAGRAAGPRRQGNFAKRGRNGRGRSMGMLLGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQIKQAEQVASGER-PPGYFDPEQESPQGEEDEFEEVTLDEFGRIVYDDEVPAPP-IPTEDQAPFWDGWS---SEKMG-LNGEEGPLKEASKFANQLSGAVNKKVLGLGDSDAPPDAA--DVGV-EGWEG-AEAAGAVTAGGAAGVGMATDWKESTNELGMNQ--ELANNVPSEL------------SIDEQFERLDTIAALEEERATMMQRLEARIEAKIGSIKNELLELVDEDFQEKRAKVNRDFAAKTEAKAA 1155
RMAP+RR+GVAL CA + V L FVPNVG R R GVE T+I SQ+ SFAGAP++ AAG RR G +RGR+GR RS ++GFD+T GVG PEV ++L VGYFVLGPVEL KL KQAGVLVGQLRD+GLGT NL I+DDQI+ AEQ+ASGE+ PP YF PE+E P +EDEFE+VT+DE+GR+VY+ + PP I ED+APFW+G S+K+ + EEGPLKEASKFA QLSGAVN+KV+G+ + AP D++ DVG WEG AEA AAGVGMA WK T+ELGM + ELAN+VPSEL +IDEQFERLDTIAALEEERA+ MQRLEA+IEAKIG+IKNELLELVDEDFQEKR K+++ FAA+ E KAA
Sbjct: 37 RMAPNRRLGVALACACSAGVALGFVPNVGNAAVRSR-RGGVEGGCTSIIGIGGASQY-GSFAGAPVLQGRPAAGQRRVG---RRGRHGR-RSTVQMVGFDNTFFGVGGPEVVVVLVVGYFVLGPVELVKLVKQAGVLVGQLRDVGLGTVNNLTTIVDDQIQNAEQIASGEKKPPDYFAPEEEFPMSDEDEFEDVTIDEYGRMVYEGQPEKPPPIKDEDRAPFWEGLGDKISDKLNEFDKEEGPLKEASKFAQQLSGAVNEKVMGIDRAAAPTDSSTSDVGAGAAWEGPAEAVAGXXXXXAAGVGMANGWKPPTSELGMEETVELANDVPSELDAPSGSSATSELTIDEQFERLDTIAALEEERASTMQRLEAKIEAKIGNIKNELLELVDEDFQEKRTKIDQQFAARAETKAA 443
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A835Z5Z6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Z6_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.600e-42 Identity = 123/299 (41.14%), Postives = 163/299 (54.52%), Query Frame = 1
Query: 265 MGMLLGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQIKQAEQVASG----ERPPGYFDPEQESPQGEEDEFEEVTLDEFGRIVYDDEVP-----APPIPTEDQAPFWDGWSSEKMGLNGEEGPLKEAS-----KFANQLSGAVNKKVLGLGDSDAPPDAADVGVEGWEGAEAAGAVTAGGAAGVGMATDWKESTNELGMNQELANNVPSELSIDEQFERLDTIAALEEERATMMQRLEARIEAKIGSIKNELLELVDEDFQEKRAKVN 1119
M M G ++ G+GAPE A++LAVGYFVLGP EL+KLTK G LVGQ RD GLGTATNL NIM+ +++ E A+G +R G + ++P G++DE+E++ + P P +D DG E L+ EE L E S KFA Q+SG NK+VL E AV GG G+A D +S A P EL+IDEQFERL+ +AALEEERA +MQRL+ EAK+ +++ ELLELVD DF+ +RAK++
Sbjct: 1 MAMFFGPGESFFGIGAPEAAVVLAVGYFVLGPTELYKLTKSIGTLVGQFRDFGLGTATNLQNIMEKELRTVEDKAAGRSTLDREWGNLE---DAPAGDDDEYEDIXXXXXXXXXXXXXXXXXXXVSAPKPAKDFFGGADGGGDEYEDLDVEEF-LAETSASNNNKFAAQMSGDWNKQVL----------------------EQEAAVAPGGGV-AGLANDVPQSLQ--------AGGEPRELTIDEQFERLEKLAALEEERAALMQRLDDAFEAKMRAVRGELLELVDSDFRARRAKLS 264
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A7R9ZB23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB23_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.340e-10 Identity = 32/65 (49.23%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 277 LGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQIK 471
LG D ILGVGAPEVA+I+ VGYF+LGP +L+KL K+ G + +R +G+ + + N M+DQ++
Sbjct: 36 LGQDSGILGVGAPEVAVIVLVGYFILGPTDLYKLVKEIGKFIQNIRTLGVEASKSFENTMEDQLE 100
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A7S0GIT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIT5_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 9.430e-10 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 235 KRGRNGRGRSMGMLLGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQI 468
K+GRN G + M +G D ILG+G PE+ I+ VGYF+LGP ELFKLTKQ G + ++ +G N + M+D I
Sbjct: 79 KKGRNS-GSELNMFMGSDGGILGIGTPELITIVLVGYFILGPSELFKLTKQIGKAITNIQTLGAEATRNFEDQMEDTI 155
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A7S1ZCG3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZCG3_TRICV) HSP 1 Score: 65.9 bits (159), Expect = 1.970e-9 Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 127 PRSTAIPRSQHRSSFAGAPIIYAGRAAGPRRQGNFAKRGRNGRGRSMGM--LLGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIG 423
P S+A Q S+F G + A+ + AK GRG S + LG D ILGVGAPE+A+I+ VGYF+LGP EL+KLTK+ G + R +G
Sbjct: 16 PPSSAAASRQTGSAFLGRTMSLLSPASS-----SSAKPKGGGRGGSTELKAFLGNDGGILGVGAPEIAVIVLVGYFILGPTELYKLTKEIGKTIQNFRSLG 111
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A7S1CRH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CRH9_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.260e-8 Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 274 LLGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQIKQAE 480
+LG D ILGVGAPE+A IL VGYFVLGP EL+KL K+ G V R + + + M++Q++ E
Sbjct: 24 VLGGDGGILGVGAPEIATILVVGYFVLGPSELYKLVKEIGKFVQNFRSLSTEASKQFESTMENQLELTE 92
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A7S2WUK8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUK8_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.520e-8 Identity = 57/166 (34.34%), Postives = 79/166 (47.59%), Query Frame = 1
Query: 283 FDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQIKQAEQV-ASGERPPGYFDPEQESPQGEEDEFEEVTLDEFGRIVYDDEVPAPPIPTEDQAPFWDGWS-SEKMGLNGEEGPLKEA-----SKFANQLSGAVNKKVL 759
F ILGVG PE+ +I AVGYFVLGP EL++L+K+ G LV QLR+ ++ MD+Q+ E A+GE + P F + Y P+ P E +AP + +E++ L P+ A SKF QL+GA N VL
Sbjct: 24 FGGGILGVGTPEIVVIAAVGYFVLGPAELYRLSKELGKLVTQLRESATEASSAFTEAMDEQLAIKEITEAAGELQNAFSSP-----------FSYEARQSRLQREYGGATPSELFPEELEAPEVEPTKLAEELALGA---PVAAAATQGGSKFQEQLNGAWNDAVL 175
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A6U3SJF9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SJF9_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.630e-8 Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 265 MGMLLGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQIK 471
+ M +G D ILGVGAPEVA+I+ VGYFVLGP EL+KLTK+ G + +R +G + + M++ ++
Sbjct: 76 LSMFMGSDGGILGVGAPEVALIVLVGYFVLGPSELYKLTKEIGKFIQNIRTLGTEATASFESSMEENLQ 144
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A7S2S1E5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1E5_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.810e-7 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 265 MGMLLGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQIKQAE 480
M M LG + I GVGAPE+ ++L VGYFVLGP EL+ L K+ G V +R +G A + M+DQ+ E
Sbjct: 95 MVMNLGGAEGIFGVGAPELVVVLIVGYFVLGPTELYSLVKEIGKFVQNIRSLGTDAAKTFEDSMEDQLDMKE 166
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Match: A0A7S2M850_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M850_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.470e-7 Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 274 LLGFDDTILGVGAPEVAIILAVGYFVLGPVELFKLTKQAGVLVGQLRDIGLGTATNLGNIMDDQIKQAE 480
+LG D ILGVGAPE+A IL VGYFVLGP EL+KL K+ G V R + + + M++Q++ E
Sbjct: 81 VLGGDGGILGVGAPEIATILVVGYFVLGPSELYKLVKEIGKFVQNFRSLSTEASKQFESTMENQLELTE 149 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12294.4711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12294.4711.1 >prot_M-pyrifera_M_contig12294.4711.1 ID=prot_M-pyrifera_M_contig12294.4711.1|Name=mRNA_M-pyrifera_M_contig12294.4711.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=417bp MAPSRRIGVALVCAWTTTVGLAFVPNVGTGCTAFRPRQGVEPRSTAIPRSback to top mRNA from alignment at M-pyrifera_M_contig12294:4033..8134- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12294.4711.1 ID=mRNA_M-pyrifera_M_contig12294.4711.1|Name=mRNA_M-pyrifera_M_contig12294.4711.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4102bp|location=Sequence derived from alignment at M-pyrifera_M_contig12294:4033..8134- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12294:4033..8134- >mRNA_M-pyrifera_M_contig12294.4711.1 ID=mRNA_M-pyrifera_M_contig12294.4711.1|Name=mRNA_M-pyrifera_M_contig12294.4711.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2502bp|location=Sequence derived from alignment at M-pyrifera_M_contig12294:4033..8134- (Macrocystis pyrifera P11B4 male)back to top |