mRNA_M-pyrifera_M_contig122433.4627.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: M4B7Z9_HYAAE (AA_permease domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7Z9_HYAAE) HSP 1 Score: 105 bits (263), Expect = 1.340e-24 Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 73 NVGVGSLISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVPHQLGF-LNHAEAPWVAVLLNS 492
N+ +ST+LWNY G+D +G +AGEV+ GRT+P +++ +I IT Y +PV + + W EG +A SIAP+LGVWV + + L ++A +SR LW A+ K +P L F E P AV+ +
Sbjct: 35 NIDWSVFLSTILWNYQGWDSLGCVAGEVKEGGRTYPIAITIAMILITVNYAVPVGAGIMVQPDSSQWHEGSLETIAMSIAPWLGVWVGMAAVVATLGEFNVVMACSSRALWATADYKMLPSFLVFECERFETPVAAVIFQT 175
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: A0A7C3NUW9_9DELT (APC family permease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3NUW9_9DELT) HSP 1 Score: 103 bits (257), Expect = 8.970e-23 Identity = 64/181 (35.36%), Postives = 100/181 (55.25%), Query Frame = 1
Query: 1 FIIQIPMGAERIWEGREGILSTRSNVGVGSLISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSI-APFLGVWVAVG--VCASQLANGIAMLAGASRMLWQMAELKWVPHQLGFLNHA--EAPWVAVLLNSFPVLGLCLLDFD 528
F + GA +I R L + +G L+STLLWN SG+D G A EV+ P R++PR +++ +I +T +Y +P+AV +D + W+EG F ++A AP+LGVW+ +G + A+ L N A+L ++R+ + MA +P L HA + P A+LLNS + L F
Sbjct: 173 FAALVMWGAPQIEPARW--LEQKDTIGWPLLLSTLLWNTSGWDNAGCCAAEVDQPSRSYPRAMTLTVILVTAVYLLPIAVVTGLDPDSAQWREGDFPKIAAKAGAPWLGVWLTLGGLISAAGLLN--ALLCTSARVPYAMARRGLLPRPLA-ARHARFDTPSKAILLNSLGIAALIPFSFQ 348
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: K3WW37_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW37_GLOUD) HSP 1 Score: 102 bits (254), Expect = 3.790e-22 Identity = 46/124 (37.10%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 61 STRSNVGVGSLISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVP 432
S N+ +ST+LWNY G+D +G +AGEV+ GRT+P + + ++ IT Y PVA ++ ++ W EG+ +A +IAP+LGVWV + L ++A +SR LW A+ K +P
Sbjct: 279 SVAPNINWSLFLSTILWNYQGWDSLGCVAGEVKDGGRTYPIAIVIAMVLITINYAFPVAAGIMVESDFTVWHEGMLETIAMTIAPWLGVWVGAAAVVATLGEFNVVMACSSRALWATADYKMLP 402
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: W2H0C5_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2H0C5_PHYPR) HSP 1 Score: 99.8 bits (247), Expect = 2.380e-21 Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 1
Query: 94 ISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVPHQLGF-LNHAEAPWVAVLLNSFPVLGLCLLDFD 528
+ST+LWNY G+D +G +AGEV+ GRT+P + + +I IT Y PV + ++ W EG +A +IAP+LGVWV + + L ++A +SR LW A+ K +P L P AV+ + L F+
Sbjct: 261 LSTILWNYQGWDSLGCVAGEVKDGGRTYPIAIVIAMILITINYAFPVGAGIMVQSDFSQWHEGSLETIAMTIAPWLGVWVGMAAVVATLGEFNVVMACSSRALWATADYKMLPSCLAIEWKRFGTPIAAVIFQTMTTGVLMNFSFE 406
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: A0A3R7KFT6_9STRA (Endo-1,3(4)-beta-glucanase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KFT6_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 7.970e-21 Identity = 45/129 (34.88%), Postives = 70/129 (54.26%), Query Frame = 1
Query: 61 STRSNVGVGSLISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVPHQLGF 447
S N+ +ST+LWNY G+D +G +AGEV+ GRT+P + + ++ IT Y PV + ++ W EG +A +I P+LGVWV + L ++A +SR LW A+ K +P L +
Sbjct: 252 SVAPNIDWSLFLSTILWNYQGWDSLGCVAGEVKDGGRTYPIAIVIAMVLITINYAFPVGAGIMVQPDFSQWHEGSLETIAMTITPWLGVWVGAAAVVATLGEFNVVMACSSRALWATADYKMLPSFLSY 380
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: A0A5D6XI90_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI90_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.170e-20 Identity = 50/146 (34.25%), Postives = 75/146 (51.37%), Query Frame = 1
Query: 94 ISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVPHQLGF-LNHAEAPWVAVLLNSFPVLGLCLLDFD 528
+ST+LWNY G+D +G +AGEV+ GRT+P + + + IT Y PVA + ++ W EG +A +IAP+LGVWV + L ++A +SR LW A+ K +P L P A+L + L F+
Sbjct: 276 LSTILWNYQGWDSLGCVAGEVKDGGRTYPIAIVIAMTLITVNYAFPVAAGIMVQPDFTTWHEGSLESIAMTIAPWLGVWVGAAAVVATLGEFNVVMACSSRALWATADYKMLPSCLAVEWKRFGTPIAAILFQTVTTALLMSFSFE 421
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: A0A662X4E2_9STRA (Endo-1,3(4)-beta-glucanase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4E2_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.470e-20 Identity = 43/113 (38.05%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 94 ISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVP 432
+ST+LWNY G+D +G +AGEV+ GRT+P + + ++ IT Y PV + ++ W EG +A +IAP+LGVWV + L ++A +SR LW A+ K +P
Sbjct: 257 LSTILWNYQGWDSLGCVAGEVKDGGRTYPIAIMIAMVLITINYAFPVGAGIMVQSDFSTWHEGSLETIAMNIAPWLGVWVGAAAVVATLGEFNVVMACSSRALWATADYKMLP 369
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: A0A662Y7G6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y7G6_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.500e-20 Identity = 42/113 (37.17%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 94 ISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVP 432
+ST+LWNY G+D +G +AGEV+ GRT+P + + ++ IT Y PV + ++ W EG +A +IAP+LG+WV + L ++A +SR LW A+ K +P
Sbjct: 265 LSTILWNYQGWDSLGCVAGEVKDGGRTYPIAIMIAMVLITINYAFPVGAGIMVQSDFSTWHEGSLETIAMTIAPWLGIWVGAAAVVATLGEFNVVMACSSRALWATADYKMLP 377
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: A0A484EE55_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EE55_BRELC) HSP 1 Score: 97.1 bits (240), Expect = 2.780e-20 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 1
Query: 94 ISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVPHQLGF-LNHAEAPWVAVLLNSFPVLGLCLLDFD 528
+ST+LWNY G+D +G +AGEV+ GRT+P + + + IT Y PV + ++ W EG +A ++AP+LGVWV + + L ++A +SR LW A+ K +P L + P AV + + L F+
Sbjct: 261 LSTILWNYQGWDSLGCVAGEVKDGGRTYPIAIVIAMGLITINYAFPVGAGIMVQSDYSQWHEGSLETIAMTVAPYLGVWVGMAAVVATLGEFNVVMACSSRALWATADYKMLPAFLTYEWRRFGTPVAAVAIQTLTTGVLMNFSFE 406
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Match: A0A0P1B0M2_PLAHL (Amino acid permease family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0M2_PLAHL) HSP 1 Score: 97.1 bits (240), Expect = 2.870e-20 Identity = 42/113 (37.17%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 94 ISTLLWNYSGFDRIGTLAGEVEHPGRTFPRGVSVGLIGITFMYTIPVAVAASIDHNWQDWKEGLFARVAGSIAPFLGVWVAVGVCASQLANGIAMLAGASRMLWQMAELKWVP 432
+ST+LWNY G+D +G +AGEV+ GRT+P + + ++ IT Y +PV ++ ++ W EG +A I P+LG WV V + L ++A +SR LW A+ K +P
Sbjct: 272 LSTILWNYQGWDSLGCVAGEVKDGGRTYPIAIVIAMVLITINYALPVGAGIMVESDFSQWHEGSLETIAIMITPWLGAWVGVAAIVATLGEFNVVMACSSRALWATADYKMLP 384 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122433.4627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122433.4627.1 >prot_M-pyrifera_M_contig122433.4627.1 ID=prot_M-pyrifera_M_contig122433.4627.1|Name=mRNA_M-pyrifera_M_contig122433.4627.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp MGAERIWEGREGILSTRSNVGVGSLISTLLWNYSGFDRIGTLAGEVEHPGback to top mRNA from alignment at M-pyrifera_M_contig122433:1..528- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122433.4627.1 ID=mRNA_M-pyrifera_M_contig122433.4627.1|Name=mRNA_M-pyrifera_M_contig122433.4627.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig122433:1..528- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122433:1..528- >mRNA_M-pyrifera_M_contig122433.4627.1 ID=mRNA_M-pyrifera_M_contig122433.4627.1|Name=mRNA_M-pyrifera_M_contig122433.4627.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig122433:1..528- (Macrocystis pyrifera P11B4 male)back to top |