prot_M-pyrifera_M_contig122353.4607.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122353.4607.1
Unique Nameprot_M-pyrifera_M_contig122353.4607.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length90
Homology
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BLAST of mRNA_M-pyrifera_M_contig122353.4607.1 vs. uniprot
Match: UPI00147D3A1D (hypothetical protein n=1 Tax=Ruegeria arenilitoris TaxID=1173585 RepID=UPI00147D3A1D)

HSP 1 Score: 66.2 bits (160), Expect = 9.220e-11
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0 
Query:    1 MLNGEKAAFWRALDFKSRDDMDFIIGRMMIVLSTNPPPEDILNKLSTELENFRVGLAVYGPALTDEQRAEILFKQAEILRGFKDDKKTC 89
            MLNG+ A FWR +D K+ D++++II R++         ED+    +  + +FRV LA YGPAL D QR  IL  Q  +L+  +   + C
Sbjct:  163 MLNGDMAQFWRIVDEKAPDEIEYIIDRLIAQEDEIKTREDVRRIFNEIVGDFRVTLATYGPALNDVQRKHILNGQLNMLKALESRPQLC 251
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122353.4607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00147D3A1D9.220e-1138.20hypothetical protein n=1 Tax=Ruegeria arenilitoris... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122353contigM-pyrifera_M_contig122353:252..521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122353.4607.1mRNA_M-pyrifera_M_contig122353.4607.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122353 237..521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122353.4607.1 ID=prot_M-pyrifera_M_contig122353.4607.1|Name=mRNA_M-pyrifera_M_contig122353.4607.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
MLNGEKAAFWRALDFKSRDDMDFIIGRMMIVLSTNPPPEDILNKLSTELE
NFRVGLAVYGPALTDEQRAEILFKQAEILRGFKDDKKTCA
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