mRNA_M-pyrifera_M_contig122229.4583.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A6I6A9K1_9PLAN (Uncharacterized protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A9K1_9PLAN) HSP 1 Score: 153 bits (387), Expect = 3.400e-47 Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMI 237
MDLTTLTSFFMWCSIFNGGLL+LWTL FLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMI
Sbjct: 1 MDLTTLTSFFMWCSIFNGGLLILWTLCFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMI 79
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A518IB03_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IB03_9PLAN) HSP 1 Score: 125 bits (314), Expect = 4.670e-36 Identity = 59/80 (73.75%), Postives = 70/80 (87.50%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMIG 240
MDL T+TSFFMWC+IFNGGLL+ W+L L P+LVYR Q WFP+PRETFDVV+Y F+GAFKLLF+VF+LVPYLALLM+G
Sbjct: 1 MDLETITSFFMWCTIFNGGLLIFWSLFCLFAPNLVYRVQSNWFPMPRETFDVVIYSFIGAFKLLFIVFSLVPYLALLMLG 80
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A2N6EGZ8_9DELT (Uncharacterized protein n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6EGZ8_9DELT) HSP 1 Score: 121 bits (304), Expect = 1.570e-34 Identity = 57/80 (71.25%), Postives = 70/80 (87.50%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMIG 240
MD+ TLT+FFMWCSI NGGLL LWT+ + PDLVYRTQ+RWFP+PRET+DVV+Y F+G FK++FLVFNLVPY+AL +IG
Sbjct: 1 MDIQTLTAFFMWCSILNGGLLALWTVFCVFAPDLVYRTQRRWFPIPRETWDVVIYYFLGMFKIVFLVFNLVPYVALRIIG 80
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A517VYX5_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VYX5_9PLAN) HSP 1 Score: 120 bits (300), Expect = 6.380e-34 Identity = 56/80 (70.00%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMIG 240
MD TLT+FFMWC+IFNGG+L+LWT F+ PD VYR Q +WFPLPRETFDVV+Y +G FKL+F+ F+LVPYLALLMIG
Sbjct: 1 MDTQTLTTFFMWCTIFNGGVLILWTFFFMFAPDYVYRLQSKWFPLPRETFDVVIYSLLGLFKLVFIAFSLVPYLALLMIG 80
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A2N6EFC5_9DELT (Uncharacterized protein n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6EFC5_9DELT) HSP 1 Score: 119 bits (298), Expect = 1.290e-33 Identity = 56/80 (70.00%), Postives = 69/80 (86.25%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMIG 240
MD+ TLT FFMWCSI NGGLL+ W+ LL PDLV+RTQ+ WFP+PRETFDV++Y F+G FK++FLVFNLVPYLALL++G
Sbjct: 1 MDIPTLTRFFMWCSIINGGLLLFWSAMCLLTPDLVFRTQRVWFPIPRETFDVLIYSFLGLFKIVFLVFNLVPYLALLIVG 80
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A6CFL7_9PLAN (Uncharacterized protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6CFL7_9PLAN) HSP 1 Score: 117 bits (294), Expect = 5.250e-33 Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMI 237
MDL TLT+FFMWC+I NG +L++WTL FLL P+LVYR+Q W PLPR++F+VVMY F+G FKLLFLVFN VPYLALL+I
Sbjct: 1 MDLQTLTAFFMWCTIVNGSILIVWTLIFLLAPELVYRSQNAWIPLPRDSFNVVMYCFIGLFKLLFLVFNAVPYLALLLI 79
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A3C0TIN0_9BACT (Uncharacterized protein n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A3C0TIN0_9BACT) HSP 1 Score: 115 bits (288), Expect = 4.320e-32 Identity = 55/80 (68.75%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMIG 240
M + TLTSFFMWC+I NGGLL LWT+ +LL PDLVYRTQ+RWF RETF+VV Y F+G FK+ FLVFN+VPY+ALL++G
Sbjct: 1 MAIQTLTSFFMWCTIINGGLLALWTIIYLLAPDLVYRTQRRWFSASRETFNVVFYSFLGLFKVFFLVFNVVPYVALLIVG 80
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A484HQ21_9DELT (Uncharacterized protein n=1 Tax=uncultured Desulfobacteraceae bacterium TaxID=218296 RepID=A0A484HQ21_9DELT) HSP 1 Score: 114 bits (286), Expect = 8.960e-32 Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMIG 240
MD+ TLT+FFMWCSI NG LLV+W+L +L P LVYR Q WFP+PRETF VV+Y FVG +K+ FLVFNLVPY+ALL+IG
Sbjct: 1 MDIETLTAFFMWCSIINGSLLVIWSLLCMLAPGLVYRIQSMWFPMPRETFGVVIYSFVGLYKIFFLVFNLVPYIALLIIG 80
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A812ZTY5_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZTY5_SYMMI) HSP 1 Score: 121 bits (303), Expect = 3.550e-31 Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVG 177
MDLTTLTSFFMWCSIFNGGLL+LWTL FLLMPDLVYRTQKRWFPLPRETFDVVMYVFVG
Sbjct: 163 MDLTTLTSFFMWCSIFNGGLLILWTLCFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVG 221
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Match: A0A0M4D244_9DELT (Uncharacterized protein n=1 Tax=Desulfuromonas soudanensis TaxID=1603606 RepID=A0A0M4D244_9DELT) HSP 1 Score: 113 bits (282), Expect = 3.550e-31 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 1 MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFDVVMYVFVGAFKLLFLVFNLVPYLALLMIG 240
MD+ TLTSFF+WCSI NG +L+LW + PDLVYRTQ+ WFP+PRETFDV+MY F+G FK+ FL FNLVPYLALL+I
Sbjct: 1 MDIRTLTSFFLWCSIINGSILILWIGFCVFAPDLVYRTQRIWFPIPRETFDVLMYGFLGLFKIFFLTFNLVPYLALLIIA 80 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122229.4583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122229.4583.1 >prot_M-pyrifera_M_contig122229.4583.1 ID=prot_M-pyrifera_M_contig122229.4583.1|Name=mRNA_M-pyrifera_M_contig122229.4583.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp MDLTTLTSFFMWCSIFNGGLLVLWTLSFLLMPDLVYRTQKRWFPLPRETFback to top mRNA from alignment at M-pyrifera_M_contig122229:38..280+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122229.4583.1 ID=mRNA_M-pyrifera_M_contig122229.4583.1|Name=mRNA_M-pyrifera_M_contig122229.4583.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=243bp|location=Sequence derived from alignment at M-pyrifera_M_contig122229:38..280+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122229:38..280+ >mRNA_M-pyrifera_M_contig122229.4583.1 ID=mRNA_M-pyrifera_M_contig122229.4583.1|Name=mRNA_M-pyrifera_M_contig122229.4583.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig122229:38..280+ (Macrocystis pyrifera P11B4 male)back to top |