mRNA_M-pyrifera_M_contig122212.4580.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: A0A351MFN3_9GAMM (AAA_31 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MFN3_9GAMM) HSP 1 Score: 130 bits (326), Expect = 5.190e-34 Identity = 63/118 (53.39%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 7 DVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGY 360
DV+ T++P L ++PAG +++ TE LAS M+ +T ELA RY DR+VLFD P+LAT+ A ALAP +GQ LVVEA +T H+TL AL +L+ +TGLILNKVK++ Y YYGY
Sbjct: 220 DVICNTSVPKLSLVPAGTERTTITERLASEAMRRLTLELAQRYADRIVLFDCPPVLATTGATALAPYIGQIALVVEAGRTTHDTLRHALQMLEHVRITGLILNKVKETMADGYQYYGY 337
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: A0A6P2A2F5_9GAMM (Tyrosine-protein kinase family protein n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A6P2A2F5_9GAMM) HSP 1 Score: 119 bits (297), Expect = 4.000e-30 Identity = 66/124 (53.23%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGYYTKG 372
++DVMLRTNIP L +IP GQ + TELLAS M + EL TRY DRLV+FD+ PILATS A LA VGQ V VVEA+ T + AL L+D + GL+LNK +++A SY YG Y G
Sbjct: 175 VADVMLRTNIPKLRLIPMGQFHAHSTELLASDNMSRLVRELETRYPDRLVIFDSPPILATSDAAVLAGLVGQVVFVVEASHTPQGYVKDALALIDSSKPIGLVLNKARKAAGSSYYGYGSYGYG 298
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: A0A837X4A4_NITER (Capsular polysaccharide biosynthesis protein n=1 Tax=Nitrosomonas europaea TaxID=915 RepID=A0A837X4A4_NITER) HSP 1 Score: 116 bits (290), Expect = 4.670e-30 Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGYY 363
ISDVM++TNI L +IPAG+ + TELLAS M SI ELA RY DR+V+FD+ P+L TS A LA Q+GQ VLVVEA +T +T+ AL ++ V LI NK K A S YYGYY
Sbjct: 88 ISDVMMKTNIKKLTLIPAGRRHTHATELLASQSMHSILVELAQRYHDRVVIFDSPPLLLTSEARVLASQMGQIVLVVEAERTTQQTVKEALQQIEACDVVNLIYNKAK--AHGSTGYYGYY 206
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: UPI001D044843 (XrtA-associated tyrosine autokinase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D044843) HSP 1 Score: 117 bits (292), Expect = 5.440e-30 Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKS-----YDYYGYYTKG 372
I +VMLRTNI L +IPAGQ + TELLAS RM +I +EL+ RY DR+++FD+ PILAT+ ++ L +GQ V VV+A +TK E++S+AL+L+ E P GLILN+ K+ YD Y YY G
Sbjct: 101 IGEVMLRTNIEKLSLIPAGQLDNRCTELLASARMDAIIKELSNRYEDRILIFDSPPILATTESVVLTAHMGQVVFVVQAGRTKRESVSSALELIGERPNLGLILNRTTGGFGKTGFGSYYDAYYYYGYG 229
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: A0A837X3A6_NITER (Capsular polysaccharide biosynthesis protein n=3 Tax=Nitrosomonas TaxID=914 RepID=A0A837X3A6_NITER) HSP 1 Score: 116 bits (290), Expect = 1.400e-29 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGYY 363
ISDVM++TNI L +IPAG+ + TELLAS M SI ELA RY DR+V+FD+ P+L TS A LA Q+GQ VLVVEA +T +T+ AL ++ V LI NK + A S +YYGYY
Sbjct: 133 ISDVMMKTNIKKLTLIPAGRRHTHATELLASQSMHSILVELAQRYHDRVVIFDSPPLLLTSEARVLASQMGQIVLVVEAERTTQQTVKEALQQIEACDVVNLIYNKAR--AHGSTEYYGYY 251
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: UPI000FDDD012 (XrtA-associated tyrosine autokinase n=1 Tax=Piscinibacter defluvii TaxID=1796922 RepID=UPI000FDDD012) HSP 1 Score: 117 bits (293), Expect = 1.690e-29 Identity = 59/122 (48.36%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGYYT 366
+SDV+LRTNIP L ++PAG+ TELLAS M+ + +EL+ RY DR++LFD+ P+L ++ + LA ++GQ +LVVEA+KT +TL AL L++ P L+LNK+ +S SY YGYY
Sbjct: 185 VSDVLLRTNIPKLSLLPAGRQHGRATELLASEAMRRLLDELSNRYADRILLFDSPPLLPSTESRVLATRMGQVLLVVEADKTSQKTLEQALATLEQCPDVSLLLNKISRSEVGSY--YGYYA 304
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: A0A7C5XN26_9GAMM (Tyrosine-protein kinase family protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XN26_9GAMM) HSP 1 Score: 115 bits (288), Expect = 4.450e-29 Identity = 61/120 (50.83%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGY 360
+S++++RTN+P L VIPAG+ TELLAS M+++T+ELA RY DR+VLFDT P+LA S A L VGQ V+VVEA +T + AL L+D + GL+LNK + R Y YYGY
Sbjct: 151 LSEIIVRTNVPKLRVIPAGRTYPNSTELLASQAMRALTQELAERYPDRVVLFDTPPLLAASQASILTYLVGQVVVVVEAGRTVQHVVKEALGLVDSSKAVGLVLNKSHERTRGDY-YYGY 269
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: A0A832N4L8_9GAMM (Polysaccharide biosynthesis tyrosine autokinase n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A832N4L8_9GAMM) HSP 1 Score: 114 bits (286), Expect = 1.280e-28 Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGYY 363
+SD++L+TN+PNL V+PAG+ TELL+S M+ + EL+ RY DR+V+ D+ P+LAT+ A LA VGQ V+VVE+ KT + + AL LLD++ + GL+LNK + DYYGYY
Sbjct: 164 LSDLLLKTNVPNLRVLPAGRSHIHSTELLSSDAMRQLVTELSQRYSDRVVIIDSPPLLATTEAAVLASLVGQVVMVVESEKTGRQEVKDALALLDQSKLIGLVLNKARPVFTS--DYYGYY 282
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: A0A4R3Y8D2_9PROT (Receptor protein-tyrosine kinase n=1 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3Y8D2_9PROT) HSP 1 Score: 114 bits (286), Expect = 1.690e-28 Identity = 57/121 (47.11%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGYY 363
++DV++RTNI L ++PAGQ TELLAS M + E++ RY DR+++FD+ P+L+TS A ALA Q+GQ V+VVEA KT + + AL ++ V G++LNK +A DYYGYY
Sbjct: 184 LADVLIRTNIEKLTILPAGQTYRHATELLASEAMDKLLEDMGNRYPDRIIIFDSPPLLSTSEASALATQMGQIVMVVEAEKTPEDAVKEALSRIESCDVIGMLLNKT--AAITGSDYYGYY 302
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Match: A0A6P2A4M0_9GAMM (Tyrosine-protein kinase family protein n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A6P2A4M0_9GAMM) HSP 1 Score: 114 bits (284), Expect = 3.750e-28 Identity = 63/121 (52.07%), Postives = 77/121 (63.64%), Query Frame = 1
Query: 1 ISDVMLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTSPILATSTALALAPQVGQFVLVVEANKTKHETLSAALDLLDETPVTGLILNKVKQSARKSYDYYGYY 363
+ DVMLRTN+P L VIP G EL+AS M+ +T+ELATRY DR+V+FD PILATS A+ LA VGQ V VVEA +T + AL LLD GL+LNK +SY +GYY
Sbjct: 183 VGDVMLRTNVPKLRVIPMGGYHPHANELVASETMRQLTQELATRYPDRMVIFDAPPILATSEAVVLAGLVGQLVFVVEAERTLQSNVQDALGLLDTAKPIGLVLNK-----SRSYSGHGYY 298 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122212.4580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122212.4580.1 >prot_M-pyrifera_M_contig122212.4580.1 ID=prot_M-pyrifera_M_contig122212.4580.1|Name=mRNA_M-pyrifera_M_contig122212.4580.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp MLRTNIPNLVVIPAGQDQSARTELLASTRMKSITEELATRYGDRLVLFDTback to top mRNA from alignment at M-pyrifera_M_contig122212:146..529- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122212.4580.1 ID=mRNA_M-pyrifera_M_contig122212.4580.1|Name=mRNA_M-pyrifera_M_contig122212.4580.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig122212:146..529- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122212:146..529- >mRNA_M-pyrifera_M_contig122212.4580.1 ID=mRNA_M-pyrifera_M_contig122212.4580.1|Name=mRNA_M-pyrifera_M_contig122212.4580.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig122212:146..529- (Macrocystis pyrifera P11B4 male)back to top |