prot_M-pyrifera_M_contig122205.4578.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122205.4578.1
Unique Nameprot_M-pyrifera_M_contig122205.4578.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length119
Homology
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A2D8LRB9_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LRB9_9ACTN)

HSP 1 Score: 196 bits (498), Expect = 5.420e-61
Identity = 97/117 (82.91%), Postives = 107/117 (91.45%), Query Frame = 0
Query:    1 SGFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRPP 117
            SGFEV+THGGRTRTG+DAVVWA E  RLGAGEILLTSM+RDGTK+GFD+PLT+ IT AV +PVIASGGVG L+HLVEGVTEGGADAVLAASIFHFGEHTV EAK +ML+AGV VRPP
Sbjct:  141 SGFEVFTHGGRTRTGVDAVVWAKEVVRLGAGEILLTSMDRDGTKNGFDLPLTSTITEAVDVPVIASGGVGALEHLVEGVTEGGADAVLAASIFHFGEHTVGEAKALMLEAGVTVRPP 257          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A7K1Z9H9_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z9H9_9ACTN)

HSP 1 Score: 189 bits (480), Expect = 2.640e-58
Identity = 95/115 (82.61%), Postives = 105/115 (91.30%), Query Frame = 0
Query:    3 FEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRPP 117
            FEVYTHGGRTRTGIDA+ WAAE +RLGAGEILLTSM+ DGTKDGFDIPLTAA+T+AV IPVIASGGVGTL HLVEGVT+GGADAVLAASIFHFGE+TVA+AK+V+    V VRPP
Sbjct:  141 FEVYTHGGRTRTGIDALQWAAEVQRLGAGEILLTSMDTDGTKDGFDIPLTAAVTSAVDIPVIASGGVGTLQHLVEGVTQGGADAVLAASIFHFGEYTVADAKRVLAANNVTVRPP 255          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A3M2H2X4_ACTSX (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H2X4_ACTSX)

HSP 1 Score: 189 bits (479), Expect = 3.860e-58
Identity = 92/118 (77.97%), Postives = 106/118 (89.83%), Query Frame = 0
Query:    1 SGFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRPPD 118
            SGFEVYTHGGRTRTG+DAV WA E ERLGAGEILLTSM+RDGT++GFD+ LTAA+  AV +PVIASGGVGTL+HLV+GV EGGADAVLAASIFHFG+HTVA+AK+++   GV VRPPD
Sbjct:  139 SGFEVYTHGGRTRTGVDAVTWAREVERLGAGEILLTSMDRDGTREGFDLELTAAVADAVGVPVIASGGVGTLEHLVDGVLEGGADAVLAASIFHFGQHTVADAKRLLAARGVTVRPPD 256          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A7Y2DE95_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DE95_9ACTN)

HSP 1 Score: 181 bits (460), Expect = 3.080e-55
Identity = 89/116 (76.72%), Postives = 101/116 (87.07%), Query Frame = 0
Query:    1 SGFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRP 116
            SGFEVYTHGGRTRTGIDA+ WAAECERLGAGEI+LTSM+RDGT+DGFDI +T A+ A + +P+IASGGVG LDHL EGV +GGADAVLAASIFHFGE++VAEAK  M   GV VRP
Sbjct:  143 SGFEVYTHGGRTRTGIDALEWAAECERLGAGEIMLTSMDRDGTRDGFDIEMTKAVNAVIGVPLIASGGVGGLDHLAEGVLDGGADAVLAASIFHFGEYSVAEAKAHMASRGVTVRP 258          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A7W0HAL8_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0HAL8_9ACTN)

HSP 1 Score: 180 bits (456), Expect = 1.070e-54
Identity = 87/115 (75.65%), Postives = 103/115 (89.57%), Query Frame = 0
Query:    2 GFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRP 116
            G+EVYTHGGR  TG+DAV WAAECERLGAGEILLTSM+RDGT+DG+D+ LT+A+T++V +PVIASGGVG LDHLV G  EGGADAVLAASIFHFGE T+A+AKQ + +AG+VVRP
Sbjct:  139 GYEVYTHGGRRPTGVDAVAWAAECERLGAGEILLTSMDRDGTRDGYDLALTSAVTSSVGVPVIASGGVGHLDHLVAGAREGGADAVLAASIFHFGEATIAQAKQRLTEAGLVVRP 253          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A520XNG2_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XNG2_9ACTN)

HSP 1 Score: 180 bits (456), Expect = 1.280e-54
Identity = 91/117 (77.78%), Postives = 100/117 (85.47%), Query Frame = 0
Query:    1 SGFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRPP 117
            SGFEVYTHGGRTRTGI AV WA E ERLGAGEI+LTSM+RDGT+DGFDI LT  I+ AV +PVIASGGVGTLDHL EGV +G A+AVLAASIFHFGEHT+A+AK  ML  GV VRPP
Sbjct:  143 SGFEVYTHGGRTRTGICAVTWANEVERLGAGEIMLTSMDRDGTRDGFDIELTQTISDAVGVPVIASGGVGTLDHLAEGVIDGHAEAVLAASIFHFGEHTIADAKNHMLSRGVTVRPP 259          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A5Q2RN38_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RN38_9ACTN)

HSP 1 Score: 178 bits (452), Expect = 5.460e-54
Identity = 87/116 (75.00%), Postives = 99/116 (85.34%), Query Frame = 0
Query:    1 SGFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRP 116
            +GFEV+THGGRT TGID V WA   E LGAGEILLTSM+RDGT++GFD+ +T A+  A  +P+IASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEH+VAEAK +M D GV VRP
Sbjct:  146 TGFEVFTHGGRTPTGIDVVEWAQRAESLGAGEILLTSMDRDGTREGFDLEMTRAVAEATNVPIIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHSVAEAKALMADRGVTVRP 261          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A2N5JW92_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JW92_9ACTN)

HSP 1 Score: 178 bits (451), Expect = 8.690e-54
Identity = 90/115 (78.26%), Postives = 97/115 (84.35%), Query Frame = 0
Query:    2 GFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRP 116
            GFEVYTHGGR  TGIDAVVWAAECER GAGEILLTSM+RDGT+DGFD+ LT  +  A  +PVIASGGVGTLDHLV G  EGGADAVLAASIFHFGE TVA+AKQ +  AGV VRP
Sbjct:  140 GFEVYTHGGRRPTGIDAVVWAAECERRGAGEILLTSMDRDGTRDGFDLDLTRQVVDATNVPVIASGGVGTLDHLVAGAVEGGADAVLAASIFHFGEFTVAQAKQHLAAAGVCVRP 254          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A6G0A6S2_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A6S2_9ACTN)

HSP 1 Score: 177 bits (448), Expect = 2.140e-53
Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 0
Query:    1 SGFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRP 116
            +GFEVYTHGGRT TG +AV WA  CERLGAGEILLTSM+RDGT+DGFD  LT  +  A  IPVIASGGVGTLDHLVEG+TEGGADAVLAASIFHF +H++AEAK+ M  AG+ VRP
Sbjct:  144 AGFEVYTHGGRTATGTEAVAWARRCERLGAGEILLTSMDRDGTRDGFDTELTRRVVDATNIPVIASGGVGTLDHLVEGITEGGADAVLAASIFHFSQHSIAEAKEHMARAGLQVRP 259          
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Match: A0A6I3EUK9_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=root TaxID=1 RepID=A0A6I3EUK9_9ACTN)

HSP 1 Score: 176 bits (446), Expect = 3.940e-53
Identity = 88/116 (75.86%), Postives = 98/116 (84.48%), Query Frame = 0
Query:    1 SGFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIPLTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTVAEAKQVMLDAGVVVRP 116
            SGFEVY HGGRT TGIDAV WA E  RLGAGEILLTSM+RDGTK+GFD+PLT  +  AV +PVIASGGVGTL+HLV+GVTEG A  VLAASIFHFG+HT+AEAK VM  AG+ VRP
Sbjct:  142 SGFEVYLHGGRTATGIDAVWWATEAARLGAGEILLTSMDRDGTKEGFDLPLTRRVADAVGVPVIASGGVGTLEHLVDGVTEGRATGVLAASIFHFGQHTIAEAKAVMAAAGITVRP 257          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122205.4578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8LRB9_9ACTN5.420e-6182.91Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A7K1Z9H9_9ACTN2.640e-5882.61Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A3M2H2X4_ACTSX3.860e-5877.97Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A7Y2DE95_9ACTN3.080e-5576.72Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A7W0HAL8_9ACTN1.070e-5475.65Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A520XNG2_9ACTN1.280e-5477.78Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A5Q2RN38_9ACTN5.460e-5475.00Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A2N5JW92_9ACTN8.690e-5478.26Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A6G0A6S2_9ACTN2.140e-5375.00Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A6I3EUK9_9ACTN3.940e-5375.86Imidazole glycerol phosphate synthase subunit HisF... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006062Histidine biosynthesisPFAMPF00977His_biosynthcoord: 2..98
e-value: 2.1E-32
score: 112.4
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..118
e-value: 2.0E-44
score: 153.4
NoneNo IPR availablePANTHERPTHR21235IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/Hcoord: 3..115
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 2..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122205contigM-pyrifera_M_contig122205:172..528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122205.4578.1mRNA_M-pyrifera_M_contig122205.4578.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122205 172..528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122205.4578.1 ID=prot_M-pyrifera_M_contig122205.4578.1|Name=mRNA_M-pyrifera_M_contig122205.4578.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
SGFEVYTHGGRTRTGIDAVVWAAECERLGAGEILLTSMNRDGTKDGFDIP
LTAAITAAVTIPVIASGGVGTLDHLVEGVTEGGADAVLAASIFHFGEHTV
AEAKQVMLDAGVVVRPPD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006062His_biosynth
IPR013785Aldolase_TIM
IPR011060RibuloseP-bd_barrel