mRNA_M-pyrifera_M_contig122184.4572.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A0A5A8DJ07_CAFRO (DUF5110 domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8DJ07_CAFRO) HSP 1 Score: 185 bits (470), Expect = 4.430e-51 Identity = 90/177 (50.85%), Postives = 119/177 (67.23%), Query Frame = 1
Query: 1 LDVVVVDMNIHKKNDWSGWTVDPNLYPSPSQLGDWFQHM-GIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGSWTDWQQGESGCFTTGGKMNPTIITDKLRATDAKRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFSGD 528
LD++V+DMN HKKNDW+G++ D NLYP P+ LGD ++ G+ N HDADGVGSWE+E+ +C +G+D S +++P DF NRT LED+V +Q+Q+ +W DWQQGE G GGK NPTI +K+R TD KRRA AG+ + R + RFGG GN RY +GFSGD
Sbjct: 279 LDILVLDMNWHKKNDWTGYSFDTNLYPVPADLGDLVRNAEGLMTLVNLHDADGVGSWENEFQALCNTLGVDCSGLQSLPADFVNRTAMNALEDVVWQPVQQQYADY-AWIDWQQGEHGGKMPGGKANPTIQLNKVRNTDPKRRA--AGSGASIKRGMQLGRFGGYGNQRYPVGFSGD 452
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A0A7S2FP11_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FP11_9STRA) HSP 1 Score: 167 bits (422), Expect = 6.230e-45 Identity = 86/180 (47.78%), Postives = 113/180 (62.78%), Query Frame = 1
Query: 1 LDVVVVDMNIHKKNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGS---WTDWQQGESGCFTTG-GKMNPTIITDKLRATDAKRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFSGD 528
LD++++DMN H K+DW+G+T D LYP P+ L + G+ A N HDA GV SWE EY NMC A+GLD TG AVP + S++ LED+VLGA+++ LG W DWQQG++ + GK NPTI T +R+TD +RR D R +R+GGLG HRYQ+GFSGD
Sbjct: 41 LDIMILDMNWHTKDDWTGYTFDSRLYPYPADLLAALKEKGLITAANLHDASGVNSWEAEYGNMCAALGLDAGTGLAVPFNISDQPSQMALEDVVLGAVEE----LGMDFWWIDWQQGDAASYGADEGKKNPTIWTSHMRSTDRQRRG------DDT-RGMVLSRWGGLGGHRYQVGFSGD 209
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A0A7S0CTB2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CTB2_9EUKA) HSP 1 Score: 162 bits (409), Expect = 6.770e-43 Identity = 86/182 (47.25%), Postives = 109/182 (59.89%), Query Frame = 1
Query: 1 LDVVVVDMNIHKKNDWSGWTVDPNLYPSPSQLGDWF-QHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGSW-TDWQQGES----GCFTTGGKMNPTIITDKLRATDAKRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFSGD 528
LDV V DMN H K W+G++ D N+ P P + W Q G+ A N HDA G+ WED+Y+ MC+A+ +DP + K + NR Y LEDIVL ++KQ G+ W DWQQGE+ G + G MNPTI DK+R TD+ RR G+ R ARFGGLGNHRYQ+GFSGD
Sbjct: 273 LDVFVFDMNWHTKQQWTGYSWDRNVLPYPEDILTWLRQEKGLRVAANLHDAQGIREWEDKYIPMCQALNIDPKSTKGINFTLVNRNYTRALEDIVLQPIEKQ--GMDFWWIDWQQGETQGGTGQGSRNGTMNPTIWLDKMRVTDSIRRCKTYGSCTNR-RGMVLARFGGLGNHRYQVGFSGD 451
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A9UR44_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UR44_MONBE) HSP 1 Score: 157 bits (396), Expect = 4.040e-41 Identity = 81/174 (46.55%), Postives = 100/174 (57.47%), Query Frame = 1
Query: 1 LDVVVVDMNIHKKNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGSWTDWQQGESGCFTTGGKMNPTIITDKLRATDAKRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFS 522
LDV V DMN H K W G+T D +LYP P+ W G+ A N HD DGV + ED +VNMCKAMGL+ + ++ Y +NLEDIVL W DWQQG + GGK NPTI DK+R TD KR+ N+D R + AR+GG+GNHRYQ+GFS
Sbjct: 277 LDVYVTDMNFHSKYHWGGYTFDKHLYPFPNDTFGWMHDQGLHLAANLHDDDGVHNTEDSFVNMCKAMGLNVDNTTEIDFSVLDKEYFYNLEDIVLKQFNMDTFDFW-WPDWQQGGTQGGAAGGKQNPTIWIDKMRVTDPKRQ-----NTD--LRGFLLARWGGMGNHRYQVGFS 442
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A0A6B2KX16_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KX16_9EUKA) HSP 1 Score: 154 bits (389), Expect = 3.520e-40 Identity = 81/179 (45.25%), Postives = 107/179 (59.78%), Query Frame = 1
Query: 1 LDVVVVDMNIHKKNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGSW-TDWQQG--ESGCFTTGGKMNPTIITDKLRATDAKRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFSGD 528
LD+ ++DM+ H K W G+++D NL+P DW G+ A N HD DGV WE Y C A+GLDP++ VP SN TY + L+D+VLG L+K+ G+ W DWQQG + GC G K NPT I + +R TD+ RR G++ R AR+GGLG HRYQ+GFSGD
Sbjct: 226 LDIFILDMDWHSKYAWGGYSIDTNLFPYMKDTFDWLHDHGLLVAANLHDDDGVNPWETMYSQFCNAIGLDPNSKVPVPFSCSNATYLYALDDVVLGDLEKK--GMDFWWIDWQQGGTQGGC--AGLKQNPTYILNHVRGTDSLRR----GDTQ---RGIVLARWGGLGTHRYQVGFSGD 393
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: F2UPR6_SALR5 (DUF5110 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPR6_SALR5) HSP 1 Score: 153 bits (387), Expect = 6.300e-40 Identity = 83/178 (46.63%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 1 LDVVVVDMNIHKKNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGSWTDWQQG--ESGCFTTGGKMNPTIITDKLRATDAKRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFSGD 528
LDV V+DMN H K W G+T DP+L+P + D+ +G+ A N HD DGV + E+ +V +CKA+GLDP V ++ Y +++EDIVL L F W DWQQG + GC GGK NPTI TDK+R T KR+ G +D R AR+GGLG HRYQ+GFSGD
Sbjct: 288 LDVFVLDMNWHTKYHWGGYTPDPHLFPYVNDTFDFMHTVGLHTAGNLHDDDGVHNTEERFVPLCKALGLDPMKTPQVNFSAVDKDYVYSVEDIVLQPLPFDF----WWIDWQQGGTQGGC--AGGKQNPTIWTDKIRVTTPKRQ----GRTD---RGLVLARWGGLGTHRYQVGFSGD 452
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A0A7S1IMM6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IMM6_9EUGL) HSP 1 Score: 143 bits (361), Expect = 2.860e-38 Identity = 76/173 (43.93%), Postives = 98/173 (56.65%), Query Frame = 1
Query: 1 LDVVVVDMNIHKKNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGSWTDWQQGESGCFTTGGKMNPTIITDKLRATDAKRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGF 519
LDV + DMN H KN W+G+T D L+P PS + W + G+ N HDA GV WE + V M +A G P G+A+P D N TY LED+VL L+ W DWQQG+ G G +NPTI+ + LRATD RR R+ +R+GG+GNHRYQ+GF
Sbjct: 207 LDVFIFDMNWHTKNAWTGYTWDRRLFPDPSAIQRWLKARGLRTGANLHDAQGVNPWEAQAVAMARATGAPP--GRAIPLDLLNATYLRALEDVVLRPLEGPTGMDFWWIDWQQGQQGL--PGDGLNPTILLNHLRATDHTRRKQNE-------RALILSRWGGMGNHRYQVGF 368
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A0A814UXR7_9BILA (Hypothetical protein n=8 Tax=Rotaria sordida TaxID=392033 RepID=A0A814UXR7_9BILA) HSP 1 Score: 139 bits (350), Expect = 6.280e-35 Identity = 77/195 (39.49%), Postives = 106/195 (54.36%), Query Frame = 1
Query: 1 LDVVVVDMNIHK----------------KNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGSWTDWQQGESGCFTTGGKMNPTIITDKLRATDAK---RRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFSGD 528
LDV+V+DM+ HK + W+G+T D +L+P+P + W + +G+ NA N H A G+ WE++Y M AMG+DPST VP + +++ Y+ +L DIVL LQ+ L W DWQQGE G NPT + + TD RRAV+ R+GGLGNHRYQ+GFSGD
Sbjct: 477 LDVLVIDMDWHKTFYKLLSNGTQDQADQEIGWTGYTFDKHLFPNPVKFFQWCKQLGLKNALNLHPASGIQPWEEKYTAMAYAMGIDPSTAHYVPFNVTDKHYSSSLSDIVLNPLQQAGVDLW-WLDWQQGEKGWMNNIPYTNPTFWLNHIFFTDPHHQDRRAVI------------LHRWGGLGNHRYQVGFSGD 658
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A0A7S1AQW0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AQW0_NOCSC) HSP 1 Score: 138 bits (348), Expect = 1.120e-34 Identity = 78/181 (43.09%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 1 LDVVVVDMNIHKKNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQ--KQFPGLG-SWTDWQQGESGCF--TTGGKMNPTIITDKLRATDAKRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFSGD 528
LD + DMN H+ W +T + YP + + MG+ N HD DG+ + E++Y+N+C+A+GL P TG A+P D N++YA EDI GALQ PG+ +W D+QQGE+ F T +NPTI+ ++LRATD+ RR G P+ S R+GGLGNHRY +GFSGD
Sbjct: 250 LDGWIFDMNWHQYGVWGSYTWNEKSYPRVQETLNQIHAMGLGVGANTHDHDGISTQENQYMNVCEALGLQPCTG-AIPFDLYNKSYAMVQEDIAWGALQTTSDTPGIDFAWIDYQQGEADSFQKTRIPNINPTIVLNRLRATDSVRRG---GIDRPMILS----RWGGLGNHRYPVGFSGD 422
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Match: A0A815VIZ3_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A815VIZ3_9BILA) HSP 1 Score: 136 bits (343), Expect = 1.310e-34 Identity = 75/195 (38.46%), Postives = 105/195 (53.85%), Query Frame = 1
Query: 1 LDVVVVDMNIHK----------------KNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEDEYVNMCKAMGLDPSTGKAVPCDFSNRTYAWNLEDIVLGALQKQFPGLGSWTDWQQGESGCFTTGGKMNPTIITDKLRATDA---KRRAVLAGNSDPVFRSWEFARFGGLGNHRYQIGFSGD 528
LDV+V+DM+ HK + W+G+T D +L+P+P + W + +G+ NA N H A G+ WE++Y M AMG+DPST VP + +++ Y+ +L DIVL LQ+ L W DWQQGE G NPT + + TD RR ++ R+GGLGNHRYQ+GFSGD
Sbjct: 313 LDVLVIDMDWHKTFYKLLSNGTQDQADQEIGWTGYTFDKHLFPNPVKFFQWCKQLGLKNALNLHPAAGIQPWEEKYTAMAYAMGIDPSTAHYVPFNVTDKHYSSSLSDIVLNPLQQAGVDLW-WLDWQQGEKGWMNNISYTNPTFWFNHIFFTDPYYQDRRPII------------LHRWGGLGNHRYQVGFSGD 494 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122184.4572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122184.4572.1 >prot_M-pyrifera_M_contig122184.4572.1 ID=prot_M-pyrifera_M_contig122184.4572.1|Name=mRNA_M-pyrifera_M_contig122184.4572.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp MNIHKKNDWSGWTVDPNLYPSPSQLGDWFQHMGIFNAFNFHDADGVGSWEback to top mRNA from alignment at M-pyrifera_M_contig122184:1..528- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122184.4572.1 ID=mRNA_M-pyrifera_M_contig122184.4572.1|Name=mRNA_M-pyrifera_M_contig122184.4572.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig122184:1..528- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122184:1..528- >mRNA_M-pyrifera_M_contig122184.4572.1 ID=mRNA_M-pyrifera_M_contig122184.4572.1|Name=mRNA_M-pyrifera_M_contig122184.4572.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig122184:1..528- (Macrocystis pyrifera P11B4 male)back to top |