prot_M-pyrifera_M_contig121568.4432.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig121568.4432.1
Unique Nameprot_M-pyrifera_M_contig121568.4432.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A1Y1IGD7_KLENI (Sister chromatid cohesion complex Cohesin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IGD7_KLENI)

HSP 1 Score: 97.4 bits (241), Expect = 2.560e-20
Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 0
Query:    3 LLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIY 167
            +L + KL     G++   S   +R+ R   T+  L L+  LV+ A        TT++QL+A  K + +S     TK   T  + +      EE M  +F  VF HRYRDV   IR + ++     I+EYPS+FL+D +TKY+GW +ND DA VR   + ALR++Y
Sbjct:  216 ILFDEKLFDKCIGFIIAISCTGVRTFRQVGTLIGLQLVSSLVTVAKSCTDLRETTQRQLQAEKKKKNASRVADLTK---TLEEMHSKTTATEELMRKLFTGVFMHRYRDVDEFIRANSVEALGSWILEYPSMFLKDLYTKYLGWMLNDKDAHVRQTAVIALRNLY 377          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A0D2U4Y1_CAPO3 (SCD domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U4Y1_CAPO3)

HSP 1 Score: 96.3 bits (238), Expect = 6.510e-20
Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 0
Query:    3 LLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDELL 173
            LLH+  L+     WL+  S A +R+ RHTAT + L +   LV+A       L  +++QL+     RG++S+  A +L+      N  + +LEE++  + + VF  RYRD  ADIR   +      I+ YPS FL D  TKY+GW +ND  A  R   L  +  +Y   + +
Sbjct:  383 LLHDQALIDVAITWLSALSTAHIRAFRHTATAACLEICSALVTAVKTVHAALDNSQRQLETERSKRGANSSS-AAQLERRIENFNADIEKLEEYISQLLQGVFVLRYRDTCADIRALCVTQLGVWIMGYPSYFLRDTHTKYLGWTLNDQVAAPRLATLNVIHKLYENKDFV 552          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: F0VZV4_9STRA (Cohesin subunit putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZV4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.200e-19
Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 0
Query:   16 WLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 171
            WLT  S A +R++RHTA+++A  +   L   A   A++L+T ++QLKAA   + +S++ + T L        KY  +  + +  IF  +  HRYRDV +DIR   L          P  FL+D + KY+GW +ND DA+VR   +R L  +Y  D+
Sbjct:  232 WLTTLSSAEIRAIRHTASIAAYTISMQLAEDAFKSAEQLSTLQRQLKAARGNKTTSASKKMTLLMKNKEAYTKYYKQTVDLIFLIFNGIVIHRYRDVVSDIRIASLKTLCSWTRSLPQEFLKDNYLKYVGWLLNDKDAKVRLNAVRLLTELYECDD 387          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A024G1L8_9STRA (SCD domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G1L8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 7.650e-19
Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 0
Query:    4 LHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 171
            L  S  +     WLT  S A +R++RHTA+++A  +   L  AA   +++L+  ++QLKAA   + +S+  ++T L        K   +  + +  IF  +  HRYRDV +DIR   L          P  FL+D + KY+GW +ND DA+VR   ++ L  +Y  DE
Sbjct:  219 LFASNSIQRFVDWLTTLSSAEIRAIRHTASIAAYTISIQLAEAASGLSEQLSIVQRQLKAARGNKTTSAVKKSTALMKNKEAYTKQYKQTVDLLFLIFNGIVIHRYRDVVSDIRIASLKTLGSWTRSLPQEFLKDNYLKYVGWLLNDKDAKVRLHAVKLLNELYECDE 386          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A7N0ULZ7_KALFE (SCD domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0ULZ7_KALFE)

HSP 1 Score: 91.3 bits (225), Expect = 3.510e-18
Identity = 56/168 (33.33%), Postives = 91/168 (54.17%), Query Frame = 0
Query:    4 LHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 171
            L +S L   ++ ++   S  P R  R  A++  L+L+   VS A     +  TT++QL A  K R     V +   + +A+Q    +  LEE +  IF+ +F HRYRD+  +IR   +       + YPSLFL+D++ KY+GW +ND +A VR   + AL+++Y  D+
Sbjct:  188 LFDSVLFEKITDYVIALSCTPPRVYRQVASLVGLSLVTSFVSVANVLGAQRETTQRQLNAEKKKRAEGPRVDSLNKRLSAIQPKINI--LEELVRKIFQGLFVHRYRDIDPNIRTTCIQSLGYWNLSYPSLFLQDRYLKYLGWTLNDKNAGVRKASVHALQNLYKVDD 353          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: UPI00053F2D46 (sister-chromatid cohesion protein 3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F2D46)

HSP 1 Score: 90.5 bits (223), Expect = 6.500e-18
Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = 0
Query:    4 LHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 171
            L +  L+   + ++   S  P R  R  A++  L L+   ++ A     +  TT++QL A  K R      RA  L    +  ++ +  +EE M  IF+ +F HRYRD+ ++IR   +      I+ YPSLFL+D++ KY+GW +ND  A VR   + AL+S+Y  D+
Sbjct:  185 LFDGVLLEKCTDYVIALSCTPPRIYRQVASLIGLQLVTSFITIAKMLGSQRETTQRQLNAENKKRAEGP--RAESLNKRLMTTHEKITTIEEMMDKIFKGLFMHRYRDIDSNIRVSCIQSLGVWILSYPSLFLQDRYLKYLGWTLNDKSAGVRKASVAALQSLYEVDD 350          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A6G1GCA0_9PEZI (uncharacterized protein n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1GCA0_9PEZI)

HSP 1 Score: 89.7 bits (221), Expect = 1.210e-17
Identity = 54/171 (31.58%), Postives = 89/171 (52.05%), Query Frame = 0
Query:    3 LLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDELL 173
            +  +  L+  +  WL   + A  R  RHTATV++LA++  L     +     A T +QL    K +G  +  R   ++     Q  ++  L+E +   F++VF HRYRD+   IR D +   +  I +YP LFLE  + +Y+GW ++D  A  R  V+R LR ++S+ + L
Sbjct:  252 MFDDPALMENIMSWLASMTSASNRPFRHTATVASLAIVSALCDVGSELVATKAQTVRQLDGEKK-KGRPNKSRVADIEKKVADQTLHLETLDEIIKGWFDTVFVHRYRDIDPRIRVDCVQALSYWISQYPDLFLEGHYLRYLGWVLSDTHAPTRLEVVRKLRDLFSKPDRL 421          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: F2U1P2_SALR5 (SCD domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1P2_SALR5)

HSP 1 Score: 89.7 bits (221), Expect = 1.230e-17
Identity = 63/184 (34.24%), Postives = 95/184 (51.63%), Query Frame = 0
Query:    3 LLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRK---QLKA--------AGKARGSSSTVRATKLKATA---VQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDEL 172
            +L +      +  +LT  S A +R+ RHTA    + L   L+  A D AK +  T+    QLKA         GK  G  +T  A KL+       Q +    R++E +  IFE +  HRYRDV+ADIR  V++     + EY  +FL+DK+ KY GW++ND  A VR  V+  L  +++ +E+
Sbjct:  327 ILFDDNFTDTLINFLTLLSTAQVRAFRHTAVFFGMKLGTLLIPLALDLAKDVEDTQATFDQLKADSATPTKKKGKKAGKRTTAEAKKLEEVEDAMSQASMRKERVDEILTLIFEGIAIHRYRDVSADIRVVVMEELGTWVTEYSEMFLDDKYLKYFGWELNDRSADVRVSVVDTLTRLFANEEM 510          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A833QUS8_9POAL (Sister-chromatid cohesion protein 3 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QUS8_9POAL)

HSP 1 Score: 85.1 bits (209), Expect = 4.880e-16
Identity = 55/168 (32.74%), Postives = 83/168 (49.40%), Query Frame = 0
Query:    4 LHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 171
            L +  L      ++   S  P R  R  AT+  + L+   +S      ++  TT++QL A  K       V +   +  A  +   +  LEE M  +F  +F HRYRD+  +IR   +      IV YPSLFL+D + KY+GW +ND +A VR   + AL+SIY  D+
Sbjct:  177 LFDKALFERCMDYVIALSCTPPRIYRQVATLIGVQLVTTYISVGKTLIQQRETTQRQLNAEKKKGNDGPRVESLNRRLQATHEK--INALEEMMRKVFTGLFMHRYRDIEPEIRMSCIRALGLWIVNYPSLFLQDSYLKYLGWTLNDKNALVRKTSVLALQSIYEIDD 342          
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A3M7MSI3_9EURO (SCD domain-containing protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 135597 TaxID=2249420 RepID=A0A3M7MSI3_9EURO)

HSP 1 Score: 84.7 bits (208), Expect = 6.580e-16
Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 0
Query:   16 WLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIY 167
            W+   S A  R  RHTAT  +L +   L   A +  + +AT + QL A  K R S++  R   ++ +     K +  ++ H+   F++V+ HRYRDVA  IR D +      IV Y  +FLE ++ +Y+GW M+D  A  R  V++ L++++
Sbjct:  208 WIGTMSGANYRPFRHTATTISLTMTSALCEVAAEIQQSMATAKTQLDAEKKKR-SANKARIRSIQESIKADEKKLEAIDAHLRDAFDTVYVHRYRDVAEVIRADCVTALGNWIVTYRKMFLEGQYLRYLGWVMSDPSAPTRHEVVKQLKAMF 358          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1IGD7_KLENI2.560e-2036.36Sister chromatid cohesion complex Cohesin n=1 Tax=... [more]
A0A0D2U4Y1_CAPO36.510e-2033.92SCD domain-containing protein n=1 Tax=Capsaspora o... [more]
F0VZV4_9STRA1.200e-1935.90Cohesin subunit putative n=1 Tax=Albugo laibachii ... [more]
A0A024G1L8_9STRA7.650e-1933.33SCD domain-containing protein n=2 Tax=Albugo candi... [more]
A0A7N0ULZ7_KALFE3.510e-1833.33SCD domain-containing protein n=2 Tax=Kalanchoe fe... [more]
UPI00053F2D466.500e-1832.74sister-chromatid cohesion protein 3 n=1 Tax=Beta v... [more]
A0A6G1GCA0_9PEZI1.210e-1731.58uncharacterized protein n=1 Tax=Eremomyces bilater... [more]
F2U1P2_SALR51.230e-1734.24SCD domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A833QUS8_9POAL4.880e-1632.74Sister-chromatid cohesion protein 3 n=1 Tax=Carex ... [more]
A0A3M7MSI3_9EURO6.580e-1632.89SCD domain-containing protein (Fragment) n=1 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013721STAGPFAMPF08514STAGcoord: 3..77
e-value: 1.0E-12
score: 47.9
NoneNo IPR availablePANTHERPTHR11199:SF0LD34181P-RELATEDcoord: 4..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
IPR039662Cohesin subunit Scc3/SAPANTHERPTHR11199STROMAL ANTIGENcoord: 4..172
IPR020839Stromalin conservative domainPROSITEPS51425SCDcoord: 105..174
score: 20.757
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 93..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121568contigM-pyrifera_M_contig121568:6..527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121568.4432.1mRNA_M-pyrifera_M_contig121568.4432.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig121568 6..527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig121568.4432.1 ID=prot_M-pyrifera_M_contig121568.4432.1|Name=mRNA_M-pyrifera_M_contig121568.4432.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
MRLLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDE
AKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAI
FESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMND
ADARVRSCVLRALRSIYSRDELLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013721STAG
IPR039662Cohesin_Scc3/SA
IPR020839SCD
IPR016024ARM-type_fold